Motif J4_24291.1 Version J4_24291.1 of this group appears in releases 4.2 to 4.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | break | 14 | 15 | 16 | 17 | 18 | 1-18 | 3-9 | 5-6 | 9-10 | 11-16 | 13-14 | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J4_9E5O_002 | 9E5O | 0.0000 | 3 | B | RNA (76-MER) | G | 16 | G | 17 | A | 19 | A | 20 | G | 21 | * | C | 38 | A | 39 | C | 40 | A | 41 | * | U | 48 | A | 49 | A | 50 | G | 51 | * | C | 61 | G | 62 | A | 63 | A | 64 | C | 67 | cWW | csS | cWW | cWW | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAAG*CACA*UAAG*CGAAUGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAA*AC*AA*GAAUG | 1 |
Release history
| Release | 4.2 |
|---|---|
| Date | 2025-10-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-cSS-cWW-F-F-cWW-cWW-F-F-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: