Motif J4_55425.1 Version J4_55425.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | break | 13 | 14 | 15 | 16 | 17 | 18 | 1-18 | 2-17 | 4-8 | 5-6 | 9-10 | 11-14 | 12-13 | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J4_8P9A_013 | 8P9A | 0.0000 | 0 | AR | LSU rRNA | C | 185 | U | 186 | A | 187 | U | 188 | G | 189 | * | C | 205 | G | 206 | U | 207 | C | 208 | * | G | 212 | A | 213 | G | 214 | * | C | 226 | G | 227 | U | 228 | G | 229 | U | 230 | G | 231 | cWW | cwW | ncSs | cWW | cWW | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAUG*CGUC*GAG*CGUGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAU*GU*A*GUGU | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-F-F-F-F-cWW-tHS-cWW-F-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: