Motif J4_69783.1 Version J4_69783.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | break | 7 | 8 | break | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-6 | 4-5 | 6-7 | 8-9 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J4_5SWD_002 | 5SWD | 0.0000 | 1 | B | Purine riboswitch | A | 21 | A | 23 | A | 24 | U | 25 | * | A | 45 | G | 46 | * | C | 53 | C | 54 | * | G | 72 | A | 73 | U | 74 | U | 75 | cWW | tHW | cWW | cWW | cWW | |
| 2 | J4_8GLP_013 | 8GLP | 1.1088 | 1 | L5 | LSU rRNA | G | 4587 | U | 4588 | A | 4589 | A2M | 4590 | * | OMU | 4620 | C | 4621 | * | G | 4676 | G | 4678 | * | C | 4712 | G | 4713 | C | 4714 | C | 4715 | cWW | tSs | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUAAU*AG*CC*GAUU | 1 |
| GUAA2M*OMUC*GUG*CGCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAA***AU | 1 |
| UA**U*GC | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-cWW-cWW-cWW
- Heat map statistics
- Min 1.11 | Avg 0.55 | Max 1.11
Coloring options: