Motif J4_95929.1 Version J4_95929.1 of this group appears in releases 3.7 to 3.14

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3	break		4		5	break		6		7	break		8		9		10		11	1-11	2-9	2-10	3-4	5-6	7-8
1	J4_6CB3_002	6CB3	0.0000	0	B	RNA (99-MER)	C	15	G	16	U	17	*	A	28	A	29	*	U	69	G	70	*	U	87	U	88	A	89	G	90	cWW	cWS	tSH	cWW	cWW	cWW
2	J4_4Y1J_001	4Y1J	0.1721	0	A	yybP-ykoY riboswitch	C	15	G	16	U	17	*	A	28	A	29	*	U	69	G	70	*	U	87	U	88	A	89	G	90	cWW	cWS	tSH	cWW	cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CGUAAUG*UUAG	2

Non-Watson-Crick part of the motif

Sequence	Counts
G***UA	2

Release history

Release	3.7	3.8	3.9	3.10	3.11	3.12	3.13	3.14
Date	2018-06-29	2018-07-27	2018-08-24	2018-09-21	2018-10-19	2018-11-16	2018-12-14	2019-01-11
Status	New id, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-cWS-tSH-cWW-cWW-cWW
Heat map statistics: Min 0.17 | Avg 0.09 | Max 0.17

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