Motif J5_22230.1 Version J5_22230.1 of this group appears in releases 3.84 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | break | 6 | 7 | 8 | break | 9 | 10 | 11 | break | 12 | 13 | 1-13 | 2-3 | 4-7 | 5-6 | 8-9 | 11-12 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J5_3ZGZ_001 | 3ZGZ | 0.0000 | 3 | B | tRNA | A | 7 | G | 10 | * | C | 25 | A | 26 | A | 27 | * | U | 43 | C | 44 | G | 45 | * | U | 47|||I | G | 47|||J | G | 49 | * | C | 65 | U | 66 | cWW | cWW | cWW | cWW | cWW | cWW |
| 2 | J5_4V87_011 | 4V87 | 0.2986 | 3 | BB | tRNA | G | 7 | G | 10 | * | C | 26 | G | 27 | C | 28 | * | G | 44 | U | 45 | G | 46 | * | C | 57 | U | 58 | A | 60 | * | U | 76 | C | 77 | ncWW | cWW | cWW | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUGG*CAA*UCG*UGUG*CU | 1 |
| GUGG*CGC*GUG*CUUA*UC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UG*A*C*GU* | 1 |
| UG*G*U*UU* | 1 |
Release history
| Release | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-cWW-F-F-cWW-F-cWW-F
- Heat map statistics
- Min 0.30 | Avg 0.15 | Max 0.30
Coloring options: