Motif J5_92974.1 Version J5_92974.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | break | 15 | 16 | break | 17 | 18 | 19 | 20 | 21 | 22 | 1-22 | 2-21 | 3-11 | 3-18 | 4-12 | 5-9 | 6-7 | 10-11 | 14-15 | 16-17 | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J5_8P9A_011 | 8P9A | 0.0000 | 1 | AR | LSU rRNA | G | 658 | G | 659 | A | 660 | G | 661 | U | 662 | C | 663 | * | G | 799 | G | 800 | A | 801 | C | 802 | * | G | 941 | U | 942 | U | 943 | C | 944 | * | G | 1375 | C | 1376 | * | G | 1431 | C | 1432 | A | 1433 | G | 1434 | A | 1435 | C | 1437 | cWW | tSH | tSs | tHW | cWS | tWS | cWW | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAGUC*GGAC*GUUC*GC*GCAGAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAGU*GA*UU**CAGAU | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-tSS-tHW-F-cWS-F-tWS-cWW-cWW-F-cWW-cWW-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: