#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
13OMJ|1|A+ 3OMJ|1|B (rep)5'-D(*CP*(C38)P*AP*GP*TP*AP*CP*TP*GP*G)-3'Structural Basis for Cyclic Py-Im Polyamide Allosteric Inhibition of Nuclear Receptor BindingX-ray diffraction0.95202010-09-08
21KGK|1|A+ 1KGK|1|B5'-D(*GP*(GCK)P*GP*TP*AP*TP*AP*CP*GP*C)-3'Direct Observation of a Cytosine Analog that Forms Five Hydrogen Bonds to Guanosine; Guanyl G-ClampX-ray diffraction1202001-12-21
31DPL|1|A+ 1DPL|1|B5'-D(*GP*CP*GP*TP*AP*(T23)P*AP*CP*GP*C)-3'A-DNA DECAMER GCGTA(T23)TACGC WITH INCORPORATED 2'-METHOXY-3'-METHYLENEPHOSPHATE-THYMIDINEX-ray diffraction0.83202000-04-04
43I5E|1|A5'-D(*CP*CP*AP*GP*GP*CP*CP*TP*GP*G)-3'Allosteric Modulation of DNA by Small MoleculesX-ray diffraction0.98102009-07-28
51EN8|1|ADNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*GP*G)-3')1 A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUMX-ray diffraction0.985102000-09-25
63I5L|1|A+ 3I5L|1|B5'-D(*CP*CP*AP*GP*GP*(C38)P*CP*TP*GP*G)-3'Allosteric Modulation of DNA by Small MoleculesX-ray diffraction1.18202009-07-28
71ENE|1|ADNA (5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3')1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM.X-ray diffraction0.985102000-09-25
83EY2|1|A+ 3EY2|1|B5'-D(*GP*CP*GP*TP*AP*(USM)P*AP*CP*GP*C)-3'A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High ResolutionX-ray diffraction1.04202009-04-28
91EN9|1|ADNA (5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3')1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM.X-ray diffraction0.985102000-09-25
101EN3|1|ADNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*GP*G)-3')1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUMX-ray diffraction0.985102000-09-25
111MLX|1|A+ 1MLX|1|B5'-D(*GP*CP*GP*TP*AP*SMTP*AP*CP*GP*C)-3'Crystal Structure Analysis of a 2'-O-[2-(Methylthio)-ethyl]-Modified Oligodeoxynucleotide DuplexX-ray diffraction1.25202002-12-04
123OZ5|1|A+ 3OZ5|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(UMX)P*AP*CP*GP*C)-3')S-Methyl Carbocyclic LNAX-ray diffraction1.36202010-11-24
132FIJ|1|A+ 2FIJ|1|B5'-D(*GP*CP*GP*TP*(A2M)P*(UAR)P*AP*CP*GP*C)-3'Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-aU-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and Arabino-Uridine (aU)X-ray diffraction1.19202006-05-23
141M77|1|A5'-D(*CP*CP*CP*GP*AP*TP*CP*GP*GP*G)-3'Near Atomic Resolution Crystal Structure of an A-DNA Decamer d(CCCGATCGGG): Cobalt Hexammine Interactions with A-DNAX-ray diffraction1.25102003-01-07
151R3G|1|A+ 1R3G|1|B5'-D(*GP*CP*GP*TP*AP*(GMU)P*AP*CP*GP*C)-3')1.16A X-ray structure of the synthetic DNA fragment with the incorporated 2'-O-[(2-Guanidinium)ethyl]-5-methyluridine residuesX-ray diffraction1.16202003-10-21
161PWF|1|A+ 1PWF|1|B5'-D(*GP*CP*GP*TP*AP*(2MU)P*(FA2)P*CP*GP*C)-3'One Sugar Pucker Fits All: Pairing Versatility Despite Conformational Uniformity in TNAX-ray diffraction1.16202004-07-13
171I5W|1|A+ 1I5W|1|B5'-D(*GP*CP*GP*TP*AP*(TLN)P*AP*CP*GP*C)-3'A-DNA DECAMER GCGTA(TLN)ACGCX-ray diffraction1.4202001-04-04
181Y9F|1|A+ 1Y9F|1|B5'-D(*GP*CP*GP*TP*AP*(2AT)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-allyl Thymidine (T*)X-ray diffraction1.6202005-06-28
191Y84|1|A+ 1Y84|1|B5'-D(*GP*CP*GP*TP*AP*(EIT)P*AP*CP*GP*C)-3'Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(imidazolyl)ethyl] Thymidine (T*)X-ray diffraction1.6202005-06-28
201YB9|1|A+ 1YB9|1|B5'-D(*GP*CP*GP*TP*AP*(2OT)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(N,N-dimethylaminooxy)ethyl] Thymidine (T*)X-ray diffraction1.65202005-06-28
211Y8L|1|A+ 1Y8L|1|B5'-D(*GP*CP*GP*TP*AP*(TFE)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(trifluoro)ethyl] Thymidine (T*)X-ray diffraction1.5202005-06-28
221Y7F|1|A+ 1Y7F|1|B5'-D(*GP*CP*GP*TP*AP*(2NT)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-[hydroxy(methyleneamino)oxy]ethyl] Thymidine (T*)X-ray diffraction1.6202005-06-28
231Y86|1|A+ 1Y86|1|B5'-D(*GP*CP*GP*TP*AP*(125)P*AP*CP*GP*C)-3'Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(fluoro)ethyl] Thymidine (T*)X-ray diffraction1.7202005-06-28
242IH2|1|B+ 2IH2|1|C5'-D(*GP*AP*CP*AP*(5PY)P*CP*GP*(6MA)P*AP*C)-3', 5'-D(*GP*TP*TP*CP*GP*AP*TP*GP*TP*C)-3'Crystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing 5-methylpyrimidin-2(1H)-one at the target base partner positionX-ray diffraction1.61202007-11-13
252IH2|1|E+ 2IH2|1|F5'-D(*GP*AP*CP*AP*(5PY)P*CP*GP*(6MA)P*AP*C)-3', 5'-D(*GP*TP*TP*CP*GP*AP*TP*GP*TP*C)-3'Crystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing 5-methylpyrimidin-2(1H)-one at the target base partner positionX-ray diffraction1.61202007-11-13
261Y9S|1|A+ 1Y9S|1|B5'-D(*GP*CP*GP*TP*AP*(2GT)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-propargyl Thymidine (T*)X-ray diffraction1.55202005-06-28
271I0G|1|A+ 1I0G|1|B5'-D(*GP*CP*GP*TP*AP*(125)P*AP*CP*GP*C)-3'1.45 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-FLUOROETHYL THYMINE IN PLACE OF T6, MEDIUM NA-SALTX-ray diffraction1.45202001-04-04
283PA0|1|ADNA 5'-D(*AP*TP*CP*TP*GP*TP*GP*GP*TP*C)-3'synthetic constructCrystal Structure of Chiral Gamma-PNA with Complementary DNA Strand: Insight Into the Stability and Specificity of Recognition an Conformational PreorganizationX-ray diffraction1.602010-12-29
293PA0|1|BDNA 5'-D(*AP*TP*CP*TP*GP*TP*GP*GP*TP*C)-3'synthetic constructCrystal Structure of Chiral Gamma-PNA with Complementary DNA Strand: Insight Into the Stability and Specificity of Recognition an Conformational PreorganizationX-ray diffraction1.602010-12-29
303OZ3|1|A+ 3OZ3|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(UVX)P*AP*CP*GP*C)-3')Vinyl Carbocyclic LNAX-ray diffraction1.57202010-11-24
312IBT|1|B+ 2IBT|1|C5'-D(*GP*AP*CP*AP*(3DR)P*CP*GP*(6MA)P*AP*C)-3', 5'-D(*GP*TP*TP*CP*GP*(2PR)P*TP*GP*TP*C)-3'Crystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing 2-aminopurine at the target position and an abasic site analog at the target base partner positionX-ray diffraction1.7202007-05-29
322IBT|1|E+ 2IBT|1|F5'-D(*GP*AP*CP*AP*(3DR)P*CP*GP*(6MA)P*AP*C)-3', 5'-D(*GP*TP*TP*CP*GP*(2PR)P*TP*GP*TP*C)-3'Crystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing 2-aminopurine at the target position and an abasic site analog at the target base partner positionX-ray diffraction1.7202007-05-29
331Y8V|1|A+ 1Y8V|1|B5'-D(*GP*CP*GP*TP*AP*(P2T)P*AP*CP*GP*C)-3'Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-propyl Thymidine (T*)X-ray diffraction1.5202005-06-28
342FIL|1|A+ 2FIL|1|B5'-D(*GP*CP*GP*TP*(A2M)P*(TAF)P*AP*CP*GP*C)-3'Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-faT-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and 2'-Fluoroarabino-Thymidine (faT)X-ray diffraction1.69202006-05-23
352FIL|1|C+ 2FIL|1|D5'-D(*GP*CP*GP*TP*(A2M)P*(TAF)P*AP*CP*GP*C)-3'Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-faT-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and 2'-Fluoroarabino-Thymidine (faT)X-ray diffraction1.69202006-05-23
363JY1|1|B+ 3JY1|1|CDNA (5'-D(*AP*AP*AP*GP*CP*CP*CP*CP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*GP*(3DR)P*GP*GP*CP*TP*T)-3')Bacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing an Abasic Site (across from C)X-ray diffraction1.754202010-09-22
371I0J|1|A+ 1I0J|1|B5'-D(*GP*CP*GP*TP*AP*(T23)P*AP*CP*GP*C)-3'1.06 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-3'-METHYLENEPHOSPHONATE (T23) THYMINE IN PLACE OF T6, HIGH CS-SALTX-ray diffraction1.06202001-04-04
382IH5|1|B+ 2IH5|1|C5'-D(*GP*AP*CP*AP*(3DR)P*CP*GP*(6MA)P*AP*C)-3', 5'-D(*GP*TP*TP*CP*GP*AP*TP*GP*TP*C)-3'Crystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing an abasic site analog at the target base partner positionX-ray diffraction1.8202007-11-13
392OKS|1|A5'-D(*CP*CP*AP*AP*(C34)P*GP*TP*TP*GP*G)-3'X-ray Structure of a DNA Repair Substrate Containing an Alkyl Interstrand Crosslink at 1.65 ResolutionX-ray diffraction1.65102007-02-13
401I0M|1|A+ 1I0M|1|B5'-D(*GP*CP*GP*TP*AP*(125)P*AP*CP*GP*C)-3'1.05 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-FLUOROETHYL THYMINE IN PLACE OF T6, HIGH RB-SALTX-ray diffraction1.05202001-04-04
411YBC|1|A+ 1YBC|1|B5'-D(*GP*CP*GP*TP*AP*(BOE)P*AP*CP*GP*C)-3')Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(benzyloxy)ethyl] Thymidine (T*)X-ray diffraction1.8202005-06-28
421NZG|1|A+ 1NZG|1|B5'-D(*GP*CP*GP*TP*AP*(3ME)P*AP*CP*GP*C)-3'Crystal structure of A-DNA decamer GCGTA(3ME)ACGC, with a modified 5-methyluridineX-ray diffraction1.6202003-08-26
431NR8|1|A5'-D(P*AP*GP*TP*GP*AP*TP*CP*TP*AP*C)-3'The crystal structure of a D-Lysine-based chiral PNA-DNA duplexX-ray diffraction1.6602003-10-28
441I0K|1|A+ 1I0K|1|B5'-D(*GP*CP*GP*TP*AP*(126)P*AP*CP*GP*C)-3'1.05 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)] THYMINE IN PLACE OF T6, MEDIUM CS-SALTX-ray diffraction1.05202001-04-04
453M7K|1|B+ 3M7K|1|CDNA (5'-D(*GP*AP*GP*GP*CP*TP*TP*AP*AP*T)-3'), DNA (5'-D(P*TP*AP*AP*GP*CP*CP*TP*C)-3')Crystal structure of PacI-DNA Enzyme product complexX-ray diffraction1.92182010-04-21
461ZFG|1|A+ 1ZFG|1|B5'-D(*CP*CP*GP*AP*GP*CP*TP*CP*GP*G)-3'CTC Duplex B-DNAX-ray diffraction1.75202005-05-10
473OZ4|1|A+ 3OZ4|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(URX)P*AP*CP*GP*C)-3')R-Methyl Carbocyclic LNAX-ray diffraction1.59202010-11-24
481ZF1|1|A+ 1ZF1|1|B5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3'CCC A-DNAX-ray diffraction1.35202005-05-10
491IKK|1|A+ 1IKK|1|B5'-D(*CP*CP*TP*TP*TP*AP*AP*AP*GP*G)-3'Intrinsic Bending and Deformability at the T-A step of CCTTTAAAGG: A Comparative Analysis of T-A and A-T steps within A-tractsX-ray diffraction1.6202001-10-05
501I0P|1|A+ 1I0P|1|B5'-D(*GP*CP*GP*TP*AP*(126)P*AP*CP*GP*C)-3'1.3 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)], MEDIUM K-SALTX-ray diffraction1.3202001-04-04
512NP7|1|B+ 2NP7|1|C5'-D(*GP*AP*CP*AP*(4PC)P*CP*GP*(6MA)P*AP*C)-3', 5'-D(*GP*TP*TP*CP*GP*(3DR)P*TP*GP*TP*C)-3'Crystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing an abasic site analog at the target position and pyrrolo-dC at the target base partner positionX-ray diffraction1.9202007-11-13
522JG3|1|B+ 2JG3|1|C5'-D(*GP*AP*CP*AP*TP*CP*GP*6MAP*AP*CP)-3', 5'-D(*GP*TP*TP*CP*GP*AP*TP*GP*TP*CP)-3'synthetic constructMtaqI with BAZX-ray diffraction1.9202007-08-07
532JG3|1|E+ 2JG3|1|F5'-D(*GP*AP*CP*AP*TP*CP*GP*6MAP*AP*CP)-3', 5'-D(*GP*TP*TP*CP*GP*AP*TP*GP*TP*CP)-3'synthetic constructMtaqI with BAZX-ray diffraction1.9202007-08-07
542WIW|1|C+ 2WIW|1|D5'-D(*DC*DG*DG*DA*DT*DA*DT*DC*DC*DGP)-3'synthetic constructCrystal structures of Holliday junction resolvases from Archaeoglobus fulgidus bound to DNA substrateX-ray diffraction1.8202009-05-26
551G38|1|B+ 1G38|1|C5'-D(*GP*AP*CP*AP*TP*CP*GP*(6MA)P*AP*C)-3', 5'-D(*GP*TP*TP*CP*GP*AP*TP*GP*TP*C)-3'ADENINE-SPECIFIC METHYLTRANSFERASE M. TAQ I/DNA COMPLEXX-ray diffraction2202001-03-05
561G38|1|E+ 1G38|1|F5'-D(*GP*AP*CP*AP*TP*CP*GP*(6MA)P*AP*C)-3', 5'-D(*GP*TP*TP*CP*GP*AP*TP*GP*TP*C)-3'ADENINE-SPECIFIC METHYLTRANSFERASE M. TAQ I/DNA COMPLEXX-ray diffraction2202001-03-05
571ZF3|1|A+ 1ZF3|1|B5'-D(*CP*CP*GP*AP*TP*AP*TP*CP*GP*G)-3'ATC Four-stranded DNA Holliday JunctionX-ray diffraction1.84202005-05-10
582BDP|1|T+ 2BDP|1|PDNA (5'-D(*GP*CP*AP*TP*GP*AP*TP*GP*C)-3'), DNA (5'-D(P*AP*GP*CP*AP*TP*CP*AP*TP*GP*C)-3')CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNAX-ray diffraction1.8191999-01-13
593D2W|1|BDNA (5'-D(*DGP*DTP*DTP*DGP*DAP*DGP*DCP*DGP*DTP*DT)-3')Crystal structure of mouse TDP-43 RRM2 domain in complex with DNAX-ray diffraction1.6592009-04-07
603HPO|1|C+ 3HPO|1|B5'-D(*CP*GP*AP*TP*CP*AP*CP*GP*(DOC))-3', 5'-D(P*GP*GP*CP*GP*TP*GP*AP*TP*CP*G)-3'Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus Y714S mutant bound to G:T mismatchX-ray diffraction1.75192010-06-23
611ZF9|1|A+ 1ZF9|1|B5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3'GGG Duplex A-DNAX-ray diffraction1.38202005-05-10
621ZEX|1|A+ 1ZEX|1|B5'-D(*CP*CP*CP*GP*GP*CP*CP*GP*GP*G)-3'CCG A-DNAX-ray diffraction1.65202005-05-10
63473D|1|A+ 473D|1|BDNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*CP*G)-3')NI2+/GUANINE INTERACTIONS AND NETROPSIN/GUANINE STACKING IN D(CGTATATACG)2X-ray diffraction1.58201999-12-02
641ZF7|1|A+ 1ZF7|1|B5'-D(*CP*CP*GP*TP*CP*GP*AP*CP*GP*G)-3'GAC Duplex B-DNAX-ray diffraction1.05202005-05-10
652B2B|1|A+ 2B2B|1|B5'-D(*CP*CP*GP*CP*TP*AP*GP*CP*GP*G)-3'Structural distortions in psoralen cross-linked DNAX-ray diffraction1.5202006-10-03
661ZF8|1|A+ 1ZF8|1|B5'-D(*CP*CP*AP*CP*CP*GP*GP*TP*GP*G)-3'GGT Duplex A-DNAX-ray diffraction1.48202005-05-10
671P54|1|A+ 1P54|1|B5'-D(*CP*CP*AP*GP*TP*AP*CP*(BRU)P*GP*G)-3'Effect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-ray diffraction1.9202003-09-02
682OYT|1|C+ 2OYT|1|BDNA strand1, DNA strand2Crystal Structure of UNG2/DNA(TM)X-ray diffraction2192007-10-30
691NVY|1|A+ 1NVY|1|Bd(TCGGTACCGA)4Strontium bound to the Holliday junction sequence d(TCGGTACCGA)4X-ray diffraction1.5202003-02-25
702VOA|1|C+ 2VOA|1|D5'-D(*CP*GP*GP*CP*TP*AP*CP*CP*GP*CP)-3', 5'-D(*GP*CP*GP*GP*TP*AP*GP*CP*CP*GP)-3'synthetic constructStructure of an AP Endonuclease from Archaeoglobus fulgidusX-ray diffraction1.7202008-12-09
711XJV|1|BhT10 d(TTAGGGTTAG)Crystal structure of human POT1 bound to telomeric single-stranded DNA (TTAGGGTTAG)X-ray diffraction1.73102004-12-14
721ZF5|1|A5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3'GCT duplex B-DNAX-ray diffraction0.99102005-05-10
732ORF|1|A+ 2ORF|1|BDNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*(BRU)P*CP*GP*G)-3')Directing Macromolecular Conformation Through Halogen BondsX-ray diffraction1.85202007-03-27
742AXB|1|A+ 2AXB|1|B5'-D(*GP*CP*GP*TP*AP*(S2M)P*AP*CP*GP*C)-3')Crystal Structure Analysis Of A 2-O-[2-(methoxy)ethyl]-2-thiothymidine Modified Oligodeoxynucleotide DuplexX-ray diffraction1.61202005-11-01
751ZF0|1|A+ 1ZF0|1|B5'-D(*CP*CP*GP*TP*TP*AP*AP*CP*GP*G)-3'B-DNAX-ray diffraction1.5202005-05-10
763LDY|1|C+ 3LDY|1|BDNA (5'-D(*GP*AP*GP*GP*CP*TP*TP*A)-3'), DNA (5'-D(P*AP*TP*TP*AP*AP*GP*CP*CP*TP*C)-3')An extraordinary mechanism of DNA perturbation exhibited by the rare-cutting HNH restriction endonuclease PacIX-ray diffraction1.97182010-04-21
771P4Y|1|A+ 1P4Y|1|B5'-D(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3'Effect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-ray diffraction1.7202003-09-02
781SA3|1|C+ 1SA3|1|D5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3'An asymmetric complex of restriction endonuclease MspI on its palindromic DNA recognition siteX-ray diffraction1.95182004-09-07
791SA3|1|E+ 1SA3|1|F5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3'An asymmetric complex of restriction endonuclease MspI on its palindromic DNA recognition siteX-ray diffraction1.95182004-09-07
803BDP|1|P+ 3BDP|1|TDNA (5'-D(*AP*GP*CP*AP*TP*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*AP*TP*GP*CP*2DT)-3')DNA POLYMERASE I/DNA COMPLEXX-ray diffraction1.9201999-01-13
811WD0|1|B+ 1WD0|1|C5'-D(*CP*CP*TP*AP*TP*AP*TP*AP*GP*G)-3'Crystal structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamersX-ray diffraction1.9202004-08-03
821I6J|1|C+ 1I6J|1|B5'-D(*AP*CP*GP*GP*GP*AP*CP*GP*AP*C)-3', 5'-D(*GP*TP*CP*GP*TP*C)-3'CRYSTAL STRUCTURE OF A PSEUDO-16-MER DNA WITH STACKED GUANINES AND TWO G-A MISPAIRS COMPLEXED WITH THE N-TERMINAL FRAGMENT OF MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASEX-ray diffraction2162001-09-07
832B1B|1|A+ 2B1B|1|B5'-D(*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3'5'-D(*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3' Zif268 binding siteX-ray diffraction1.9202005-09-27
841L6B|1|A+ 1L6B|1|B5'-D(*CP*CP*GP*GP*TP*AP*CP*(5CM)P*GP*G)-3'CRYSTAL STRUCTURE ANALYSIS OF THE ALL DNA HOLLIDAY JUNCTION STRUCTURE OF CCGGTACM5CGGX-ray diffraction1.5202002-08-07
851S23|1|A5'-D(*CP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3'Crystal Structure Analysis of the B-DNA Decamer CGCAATTGCGX-ray diffraction1.6102004-04-06
862FR4|1|M5'-D(*CP*TP*GP*CP*CP*TP*TP*CP*AP*G)-3'Structure of Fab DNA-1 complexed with a stem-loop DNA ligandX-ray diffraction1.95102007-01-09
872FR4|1|N5'-D(*CP*TP*GP*CP*CP*TP*TP*CP*AP*G)-3'Structure of Fab DNA-1 complexed with a stem-loop DNA ligandX-ray diffraction1.95102007-01-09
881ZF4|1|A+ 1ZF4|1|B5'-D(*CP*CP*GP*AP*TP*AP*TP*CP*GP*G)-3'ATC Four-stranded DNA Holliday JunctionX-ray diffraction1.65202005-05-10
893IGT|1|A+ 3IGT|1|B+ 3IGT|1|C+ 3IGT|1|D5'-D(*CP*CP*GP*AP*GP*TP*CP*CP*TP*A)-3', 5'-D(*CP*TP*CP*AP*AP*CP*TP*CP*GP*G)-3', 5'-D(*TP*AP*GP*GP*GP*GP*CP*CP*GP*A)-3', 5'-D(*TP*CP*GP*GP*CP*CP*TP*GP*AP*G)-3'A rare nucleotide base tautomer in the structure of an asymmetric DNA junctionX-ray diffraction1.9402009-08-18
901NVN|1|A+ 1NVN|1|B5'-D(CpCpGpGpTpApCpCpGpG)-3'Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 1.8 AX-ray diffraction1.8202003-02-25
911I0N|1|A+ 1I0N|1|B5'-D(*GP*CP*GP*TP*AP*(126)P*AP*CP*GP*C)-3'1.3 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)] THYMINE IN PLACE OF T6, MEDIUM RB-SALTX-ray diffraction1.3202001-04-04
921ZFB|1|A+ 1ZFB|1|B5'-D(*CP*CP*GP*CP*CP*GP*GP*CP*GP*G)-3'GGC Duplex B-DNAX-ray diffraction1.65202005-05-10
931P4Z|1|A5'-D(*CP*CP*AP*GP*TP*AP*CP*TP*GP*G)-3'Effect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-ray diffraction2102003-09-02
943IFF|1|A+ 3IFF|1|BDNA (5'-D(*GP*TP*AP*CP*GP*CP*GP*TP*(XUA)P*C)-3')2'-SeMe-A modified DNA decamerX-ray diffraction1.75202009-08-11
951I0O|1|A+ 1I0O|1|B5'-D(*GP*CP*GP*TP*AP*(T23)P*AP*CP*GP*C)-3'1.6 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-3'-METHYLENEPHOSPHONATE THYMINE IN PLACE OF T6, HIGH K-SALTX-ray diffraction2202001-04-04
961S1K|1|A5'-D(*CP*CP*(1AP)P*GP*TP*AP*CP*TP*GP*G)-3'INFLUENCE OF GROOVE INTERACTIONS ON DNA HOLLIDAY JUNCTION FORMATIONX-ray diffraction1.9102004-08-31
971ZF2|1|A+ 1ZF2|1|B5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3'Four-stranded DNA Holliday Junction (CCC)X-ray diffraction1.95202005-05-10
982ORH|1|A+ 2ORH|1|BDNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*(DU)P*CP*GP*G)-3')Directing Macromolecular Conformation Through Halogen BondsX-ray diffraction1.9202007-03-27
991ZF6|1|A+ 1ZF6|1|B5'-D(*CP*CP*CP*CP*AP*TP*GP*GP*GP*G)-3'TGG DUPLEX A-DNAX-ray diffraction1.5202005-05-10
1001ZFA|1|A+ 1ZFA|1|B5'-D(*CP*CP*TP*CP*CP*GP*GP*AP*GP*G)-3'GGA Duplex A-DNAX-ray diffraction1.56202005-05-10
1011ZFC|1|A+ 1ZFC|1|B5'-D(*CP*CP*GP*AP*TP*AP*TP*CP*GP*G)-3'ATC Duplex B-DNAX-ray diffraction2202005-05-10
1021ZEZ|1|A+ 1ZEZ|1|B5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3'ACC Holliday JunctionX-ray diffraction2202005-05-10
1032ORG|1|A+ 2ORG|1|BDNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*(BRU)P*CP*GP*G)-3')Directing Macromolecular Conformation Through Halogen BondsX-ray diffraction2202007-03-27
1041L4J|1|A+ 1L4J|1|B+ 1L4J|1|C+ 1L4J|1|D5'-D(*TP*CP*GP*GP*TP*AP*CP*CP*GP*A)-3'Holliday Junction TCGGTACCGA with Na and Ca Binding Sites.X-ray diffraction1.85402003-03-04
1051NT8|1|A+ 1NT8|1|B5'-d(CpCpGpGpTpApCpCpGpG)-3'Structural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 2.00 AX-ray diffraction2202003-02-11
1061M6G|1|A+ 1M6G|1|B5'-D(*TP*CP*GP*GP*TP*AP*CP*CP*GP*A)-3'Structural Characterisation of the Holliday Junction TCGGTACCGAX-ray diffraction1.652202003-05-06
1071ZEY|1|A+ 1ZEY|1|B5'-D(*CP*CP*CP*CP*GP*CP*GP*GP*GP*G)-3'CGG A-DNAX-ray diffraction1.7202005-05-10
1083PBX|1|A+ 3PBX|1|BDNAStrontium bound to the sequence d(CCGGCGCCGG)X-ray diffraction1.879202011-02-02
1091NQS|1|A+ 1NQS|1|B5'-d(TpCpGpGpTpApCpCpGpA)-3'Structural Characterisation of the Holliday Junction formed by the sequence d(TCGGTACCGA) at 1.97 AX-ray diffraction1.97202003-02-04
1101Z8V|1|A+ 1Z8V|1|B(5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3')The Structure of d(GGCCAATTGG) Complexed with NetropsinX-ray diffraction1.75202006-03-14
1111ZFF|1|A5'-D(*CP*CP*GP*AP*AP*TP*TP*CP*GP*G)-3'TTC Duplex B-DNAX-ray diffraction0.94102005-05-10
1123GGK|1|A5'-D(*CP*CP*AP*GP*GP*CP*CP*TP*GP*G) -3'Locating monovalent cations in one turn of G/C rich B-DNAX-ray diffraction0.87102010-03-09
1131SK5|1|A+ 1SK5|1|B5'-D(*CP*TP*TP*TP*TP*AP*AP*AP*AP*G)-3'The ultra-high resolution structure of d(CTTTTAAAAG)2: modulation of bending by T-A steps and its role in DNA recognitionX-ray diffraction0.89202005-06-21
1143GGI|1|A5'-D(*CP*CP*AP*GP*GP*CP*CP*TP*GP*G) -3'Locating monovalent cations in one turn of G/C rich B-DNAX-ray diffraction0.98102010-03-09
115440D|1|A+ 440D|1|BDNA (5'-D(*AP*GP*GP*GP*GP*CP*CP*CP*CP*T)-3')HIGH RESOLUTION A-DNA CRYSTAL STRYCTURES OF D(AGGGGCCCCT): AN A-DNA MODEL OF POLY(DG).POLY(DC)X-ray diffraction1.1201999-01-15
116431D|1|A+ 431D|1|BDNA (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3')5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'X-ray diffraction1.15201999-09-15
1171D8X|1|A+ 1D8X|1|B5'-D(*CP*CP*GP*AP*AP*TP*GP*AP*GP*G)-3'CRYSTAL STRUCTURE OF DNA SHEARED TANDEM G A BASE PAIRSX-ray diffraction1.2201999-11-05
1181XUW|1|A+ 1XUW|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(NMT)P*AP*CP*GP*C)-3')Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-ray diffraction1.25202004-12-14
1191I0Q|1|A+ 1I0Q|1|B5'-D(*GP*CP*GP*TP*AP*(126)P*AP*CP*GP*C)-3'1.3 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)] THYMINE IN PLACE OF T6, MEDIUM NA-SALTX-ray diffraction1.3202001-04-04
1201XUX|1|A+ 1XUX|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(NMS)P*AP*CP*GP*C)-3')Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-ray diffraction1.3202004-12-14
1211MA8|1|A+ 1MA8|1|B5'-D(*GP*CP*GP*TP*AP*UMSP*AP*CP*GP*C)-3'A-DNA decamer GCGTA(UMS)ACGC with incorporated 2'-methylseleno-uridineX-ray diffraction1.3202002-12-11
1221D61|1|ADNA (5'-D(*CP*CP*AP*AP*CP*IP*TP*TP*GP*G)-3')THE STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-I-T-T-G-G: MONOCLINIC FORMX-ray diffraction1.3101993-04-15
123232D|1|ADNA (5'-D(*AP*GP*GP*CP*AP*TP*GP*CP*CP*T)-3')THE HIGH RESOLUTION CRYSTAL STRUCTURE OF THE DNA DECAMER D(AGGCATGCCT)X-ray diffraction1.3101996-03-22
1243DNB|1|ADNA (5'-D(*CP*CP*AP*AP*GP*AP*TP*TP*GP*G)-3')HELIX GEOMETRY, HYDRATION, AND G.A MISMATCH IN A B-DNA DECAMERX-ray diffraction1.3101989-01-09
1251XUX|1|C+ 1XUX|1|DDNA (5'-D(*GP*CP*GP*TP*AP*(NMS)P*AP*CP*GP*C)-3')Structural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-ray diffraction1.3202004-12-14
1265DNB|1|ADNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*GP*G)-3')STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-G-T-T-G-G AND COMPARISON WITH ISOMORPHOUS DECAMERS C-C-A-A-G-A-T-T-G-G AND C-C-A-G-G-C-C-T-G-GX-ray diffraction1.4101991-10-15
127441D|1|ADNA (5'-D(*AP*GP*GP*GP*GP*CP*CP*CP*CP*T)-3')synthetic constructHIGH RESOLUTION A-DNA CRYSTAL STRYCTURES OF D(AGGGGCCCCT): AN A-DNA MODEL OF POLY(DG).POLY(DC)X-ray diffraction1.5101999-01-15
1281D49|1|A+ 1D49|1|BDNA (5'-D(*CP*GP*AP*TP*TP*AP*AP*TP*CP*G)-3')THE STRUCTURE OF A B-DNA DECAMER WITH A CENTRAL T-A STEP: C-G-A-T-T-A-A-T-C-GX-ray diffraction1.5201992-04-15
1291D23|1|A+ 1D23|1|BDNA (5'-D(*CP*GP*AP*TP*CP*GP*AP*TP*CP*G)-3')THE STRUCTURE OF B-HELICAL C-G-A-T-C-G-A-T-C-G AND COMPARISON WITH C-C-A-A-C-G-T-T-G-G. THE EFFECT OF BASE PAIR REVERSALSX-ray diffraction1.5201991-10-15
1301D9R|1|A+ 1D9R|1|B5'-D(*CP*CP*GP*AP*AP*(BRU)P*GP*AP*GP*G)-3'CRYSTAL STRUCTURE OF DNA SHEARED TANDEM G-A BASE PAIRSX-ray diffraction1.5201999-11-05
1311CW9|1|A+ 1CW9|1|B5'-D(*CP*CP*AP*GP*(G47)P*CP*CP*TP*GP*G)-3'DNA DECAMER WITH AN ENGINEERED CROSSLINK IN THE MINOR GROOVEX-ray diffraction1.55201999-10-14
1321CW9|1|C+ 1CW9|1|D5'-D(*CP*CP*AP*GP*(G47)P*CP*CP*TP*GP*G)-3'DNA DECAMER WITH AN ENGINEERED CROSSLINK IN THE MINOR GROOVEX-ray diffraction1.55201999-10-14
133183D|1|ADNA (5'-D(*CP*CP*AP*(8OG)P*CP*GP*CP*TP*GP*G)-3')X-RAY STRUCTURE OF A DNA DECAMER CONTAINING 7, 8-DIHYDRO-8-OXOGUANINEX-ray diffraction1.6101995-02-27
134213D|1|A+ 213D|1|BDNA (5'-D(*CP*CP*IP*GP*GP*CP*CP*(5CM)P*GP*G)-3')CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCIGGCCM5CGG) AT 1.6 ANGSTROMS SHOWING THE UNEXPECTED WOBBLE I.M5C BASE PAIRX-ray diffraction1.6201996-01-31
1351DNZ|1|ADNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3')A-DNA DECAMER ACCGGCCGGT WITH MAGNESIUM BINDING SITESX-ray diffraction1.6102000-04-10
136410D|1|A+ 410D|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(T38)P*AP*CP*GP*C)-3')DUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-ETHOXYMETHYLENE RIBONUCLEOSIDEX-ray diffraction1.6201998-07-17
1371I0F|1|A+ 1I0F|1|B5'-D(*GP*CP*GP*TP*AP*(127)P*AP*CP*GP*C)-3'1.6 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-AMINOOXYETHYL THYMINE IN PLACE OF T6, BA-FORMX-ray diffraction1.6202001-04-04
1381BD1|1|ADNA (5'-D(*CP*CP*AP*GP*GP*CP*CP*TP*GP*G)-3')CRYSTALLOGRAPHIC STUDY OF ONE TURN OF G/C-RICH B-DNAX-ray diffraction1.6101990-01-15
139412D|1|A+ 412D|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(126)P*AP*CP*GP*C)-3')DUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-METHYL-[TRI(OXYETHYL)] RIBONUCLEOSIDEX-ray diffraction1.65201998-07-17
140160D|1|A+ 160D|1|BDNA (5'-D(*CP*CP*CP*GP*GP*CP*CP*GP*GP*G)-3')HIGH RESOLUTION CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCCGGCCGGG): NOVEL INTERMOLECULAR BASE-PAIRED G*(G.C) TRIPLETSX-ray diffraction1.65201994-05-18
1411D56|1|A+ 1D56|1|BDNA (5'-D(*CP*GP*AP*TP*AP*TP*AP*TP*CP*G)-3')ALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-GX-ray diffraction1.7201992-09-15
142123D|1|A+ 123D|1|BDNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3')DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLORX-ray diffraction1.7201993-10-15
143137D|1|A+ 137D|1|BDNA (5'-D(*GP*CP*GP*GP*GP*CP*CP*CP*GP*C)-3')A-DNA DECAMER D(GCGGGCCCGC)-ORTHORHOMBIC CRYSTAL FORMX-ray diffraction1.7201994-01-15
144383D|1|A+ 383D|1|BDNA (5'-D(*CP*(5CM)P*GP*CP*(5CM)P*GP*GP*(5CM)P*GP*G)-3')Hydration and recognition of methylated CPG steps in DNAX-ray diffraction1.7201998-04-08
145348D|1|ADNA (5'-D(*GP*AP*CP*CP*GP*CP*GP*GP*TP*C)-3')X-RAY CRYSTAL STRUCTURES OF THE DECAMER DGACCGCGGTC: LOW SALT CONCENTRATIONX-ray diffraction1.7101997-10-09
146196D|1|A+ 196D|1|BDNA (5'-D(*CP*TP*CP*TP*CP*GP*AP*GP*AP*G)-3')CRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTIONX-ray diffraction1.7201995-02-27
147122D|1|A+ 122D|1|BDNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3')DNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLORX-ray diffraction1.7201993-10-15
1481D02|1|C+ 1D02|1|DDNA (5'-D(*GP*CP*CP*AP*AP*TP*TP*GP*GP*C)-3')CRYSTAL STRUCTURE OF MUNI RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNAX-ray diffraction1.7202000-03-08
1493KDE|1|A+ 3KDE|1|B5'-D(*(BRU)P*CP*CP*AP*CP*TP*TP*AP*AP*C)-3', 5'-D(*GP*TP*TP*AP*AP*GP*(BRU)P*GP*GP*A)-3'Crystal structure of the THAP domain from D. melanogaster P-element transposase in complex with its natural DNA binding siteX-ray diffraction1.74202009-12-08
1502D25|1|A+ 2D25|1|BDNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3')C-C-A-G-G-C-M5C-T-G-G; HELICAL FINE STRUCTURE, HYDRATION, AND COMPARISON WITH C-C-A-G-G-C-C-T-G-GX-ray diffraction1.75201991-04-23
1512GWA|1|A+ 2GWA|1|B5'-D(*Tp*Cp*Gp*Gp*Tp*Ap*Cp*Cp*Gp*A)-3'Crystal Structure of a Complex Formed Between the DNA Holliday Junction and a Bis-Acridine Molecule.X-ray diffraction1.75202006-06-06
1523JXZ|1|B+ 3JXZ|1|CDNA (5'-D(*AP*AP*AP*GP*CP*CP*TP*CP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*GP*(3DR)P*GP*GP*CP*TP*T)-3')Bacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing an Abasic Site (across from T)X-ray diffraction1.75202010-09-22
153138D|1|ADNA (5'-D(*GP*CP*GP*GP*GP*CP*CP*CP*GP*C)-3')A-DNA DECAMER D(GCGGGCCCGC)-HEXAGONAL CRYSTAL FORMX-ray diffraction1.8101994-01-15
154334D|1|A+ 334D|1|BDNA (5'-D(*CP*AP*TP*GP*GP*CP*CP*AP*TP*G)-3')DEFINING GC-SPECIFICITY IN THE MINOR GROOVE: SIDE-BY-SIDE BINDING OF THE DI-IMIDAZOLE LEXITROPSIN TO C-A-T-G-G-C-C-A-T-GX-ray diffraction1.8201997-08-29
155396D|1|ADNA (5'-D(*GP*GP*CP*CP*GP*CP*GP*GP*CP*C)-3')synthetic constructCRYSTAL STRUCTURES OF TWO ISOMOPHOUS A-DNA DECAMERS D(GTACGCGTAC) AND D(GGCCGCGGCC)X-ray diffraction1.8101998-05-01
156307D|1|A+ 307D|1|BDNA (5'-D(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3')Structure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-ray diffraction1.85201997-01-27
1571JTL|1|A+ 1JTL|1|B5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'The crystal structure of d(GGCCAATTGG) Complexed with DistamycinX-ray diffraction1.85202002-08-09
158307D|1|C+ 307D|1|DDNA (5'-D(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3')Structure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-ray diffraction1.85201997-01-27
159307D|1|E+ 307D|1|FDNA (5'-D(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3')Structure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-ray diffraction1.85201997-01-27
160432D|1|A+ 432D|1|BDNA (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3')D(GGCCAATTGG) COMPLEXED WITH DAPIX-ray diffraction1.89201999-12-18
161395D|1|ADNA (5'-D(*GP*TP*AP*CP*GP*CP*GP*TP*AP*C)-3')CRYSTAL STRUCTURES OF TWO ISOMORPHOUS A-DNA DECAMERS D(GTACGCGTAC) AND D(GGCCGCGGCC)X-ray diffraction1.9101998-05-01
162212D|1|ADNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3')INFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-ray diffraction1.9101996-01-31
163349D|1|ADNA (5'-D(*GP*AP*CP*CP*GP*CP*GP*GP*TP*C)-3')X-RAY CRYSTAL STRUCTURES OF THE DECAMER DGACCGCGGTC: HIGH SALT CONCENTRATIONX-ray diffraction1.9101997-10-09
164414D|1|A+ 414D|1|BDNA (5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3')5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3'X-ray diffraction1.9201999-06-14
165221D|1|A+ 221D|1|BDNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3')INFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-ray diffraction1.9201996-01-31
166158D|1|A+ 158D|1|BDNA (5'-D(*CP*CP*AP*AP*GP*CP*TP*TP*GP*G)-3')CRYSTALLOGRAPHIC ANALYSIS OF C-C-A-A-G-C-T-T-G-G AND ITS IMPLICATIONS FOR BENDING IN B-DNAX-ray diffraction1.9201994-05-31
167260D|1|ADNA (5'-D(*GP*CP*AP*CP*GP*CP*GP*TP*GP*C)-3')CRYSTAL STRUCTURE OF THE SELF-COMPLEMENTARY 5'-PURINE START DECAMER D(GCACGCGTGC) IN THE A-DNA CONFORMATION-PART IIX-ray diffraction1.9101996-06-27
168414D|1|C+ 414D|1|DDNA (5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3')5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3'X-ray diffraction1.9201999-06-14
1691Q3F|1|C+ 1Q3F|1|B5'-D(*AP*AP*AP*GP*AP*TP*AP*AP*CP*A)-3', 5'-D(*TP*GP*TP*(NRI)P*AP*TP*CP*TP*T)-3'Uracil DNA glycosylase bound to a cationic 1-aza-2'-deoxyribose-containing DNAX-ray diffraction1.9192004-03-23
1701BC8|1|A+ 1BC8|1|BDNA (5'-D(*AP*AP*CP*TP*TP*CP*CP*GP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*CP*GP*GP*AP*AP*GP*T)-3')STRUCTURES OF SAP-1 BOUND TO DNA SEQUENCES FROM THE E74 AND C-FOS PROMOTERS PROVIDE INSIGHTS INTO HOW ETS PROTEINS DISCRIMINATE BETWEEN RELATED DNA TARGETSX-ray diffraction1.93201998-12-01
171411D|1|A+ 411D|1|BDNA (5'-D(*GP*CP*GP*TP*AP*(T39)P*AP*CP*GP*C)-3')DUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-METHOXYETHYL RIBONUCLEOSIDEX-ray diffraction1.93201998-07-17
172327D|1|ADNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*CP*GP*C)-3')CRYSTAL STRUCTURES OF D(GM5CGM5CGCGCGC)X-ray diffraction1.94101997-05-22
173238D|1|ADNA (5'-D(*AP*GP*GP*(CBR)P*AP*TP*GP*CP*CP*T)-3')CRYSTAL STRUCTURE OF THE DNA DECAMER D(AGG(BR)CATGCCT): COMPARISON WITH D(AGGCATGCCT) AND IMPLICATIONS FOR COBALT HEXAMMINE BINDING TO DNAX-ray diffraction2101996-01-30
1741WQY|1|A+ 1WQY|1|B5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3'X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solutionX-ray diffraction2202005-06-21
175220D|1|ADNA (5'-D(*AP*CP*CP*CP*GP*CP*GP*GP*GP*T)-3')INFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-ray diffraction2101996-01-31
1761D13|1|ADNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3')MOLECULAR STRUCTURE OF AN A-DNA DECAMER D(ACCGGCCGGT)X-ray diffraction2101990-10-15
177318D|1|A+ 318D|1|BDNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*(CBR)P*GP*G)-3')CRYSTAL STRUCTURES OF D(CCGGGCC(BR)5CGG)-HEXAGONAL FORMX-ray diffraction2201997-05-22
178126D|1|A+ 126D|1|BDNA (5'-D(*CP*AP*TP*GP*GP*CP*CP*AP*TP*G)-3')CRYSTAL STRUCTURE OF CATGGCCATG AND ITS IMPLICATIONS FOR A-TRACT BENDING MODELSX-ray diffraction2201993-10-15
179365D|1|A+ 365D|1|BDNA (5'-D(*CP*CP*AP*GP*GP*(CBR)P*CP*TP*GP*G)-3')STRUCTURAL BASIS FOR G C RECOGNITION IN THE DNA MINOR GROOVEX-ray diffraction2201998-02-05
1801DA3|1|A+ 1DA3|1|BDNA (5'-D(*CP*GP*AP*TP*CP*GP*(6MA)P*TP*CP*G)-3')THE CRYSTAL STRUCTURE OF THE TRIGONAL DECAMER C-G-A-T-C-G-6MEA-T-C-G: A B-DNA HELIX WITH 10.6 BASE-PAIRS PER TURNX-ray diffraction2201993-04-15
181240D|1|A+ 240D|1|BDNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3')EFFECT OF END BASE STEPS ON DNA FORM: CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCGGGCCCGG)X-ray diffraction2201996-06-20
1821D57|1|A+ 1D57|1|BDNA (5'-D(*CP*GP*AP*TP*AP*TP*AP*TP*CP*G)-3')ALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-GX-ray diffraction2201992-09-15
183272D|1|A+ 272D|1|BDNA (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3')PARALLEL AND ANTIPARALLEL (G.GC)2 TRIPLE HELIX FRAGMENTS IN A CRYSTAL STRUCTUREX-ray diffraction2201996-09-20
1841D62|1|A5'-D(*CP*CP*AP*AP*IP*AP*TP*TP*GP*G)-3'THE STRUCTURE OF A /B-DNA$ DECAMER WITH AN I(SLASH)*A MISMATCH AND COMPARISON WITH THE G(SLASH)*A MISMATCHX-ray diffraction2101993-07-15
1851SM5|1|A+ 1SM5|1|B5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*GP*C)-3', 5'-D(*GP*CP*(BRU)P*TP*AP*AP*TP*(BRU)P*CP*G)-3'Crystal Structure of a DNA Decamer Containing a Thymine-dimerX-ray diffraction2202004-05-25
1861SM5|1|C+ 1SM5|1|D5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*GP*C)-3', 5'-D(*GP*CP*(BRU)P*TP*AP*AP*TP*(BRU)P*CP*G)-3'Crystal Structure of a DNA Decamer Containing a Thymine-dimerX-ray diffraction2202004-05-25
1871JGG|1|C+ 1JGG|1|D5'-D(P*AP*AP*TP*TP*CP*AP*AP*TP*TP*A)-3', 5'-D(P*TP*AP*AP*TP*TP*GP*AP*AP*TP*T)-3'Even-skipped Homeodomain Complexed to AT-rich DNAX-ray diffraction2202001-07-06
1881EMJ|1|C+ 1EMJ|1|BDNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*(ASU)P*AP*TP*CP*TP*T)-3')URACIL-DNA GLYCOSYLASE BOUND TO DNA CONTAINING A 4'-THIO-2'DEOXYURIDINE ANALOG PRODUCTX-ray diffraction2192000-05-16

Release history

Release0.10.20.30.4
Date2011-02-052011-02-122011-02-162011-02-19

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTsNAKB NA annotationNAKB protein annotation
13M7K|1|B+ 3M7K|1|CCrystal structure of PacI-DNA Enzyme product complexX-RAY DIFFRACTION1.9218enzyme,hydrolase,nuclease
23D2W|1|BCrystal structure of mouse TDP-43 RRM2 domain in complex with DNAX-RAY DIFFRACTION1.659regulatory,transcription
31Z8V|1|A+ 1Z8V|1|BThe Structure of d(GGCCAATTGG) Complexed with NetropsinX-RAY DIFFRACTION1.7520B-form double helix,double helix,structure
4432D|1|A+ 432D|1|BD(GGCCAATTGG) COMPLEXED WITH DAPIX-RAY DIFFRACTION1.8920B-form double helix,double helix,structure
51JTL|1|A+ 1JTL|1|BThe crystal structure of d(GGCCAATTGG) Complexed with DistamycinX-RAY DIFFRACTION1.8520B-form double helix,double helix,structure
6272D|1|A+ 272D|1|BPARALLEL AND ANTIPARALLEL (G.GC)2 TRIPLE HELIX FRAGMENTS IN A CRYSTAL STRUCTUREX-RAY DIFFRACTION220structure,triple helix
7431D|1|A+ 431D|1|B5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'X-RAY DIFFRACTION1.1520B-form double helix,double helix,structure
82IH5|1|B+ 2IH5|1|CCrystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing an abasic site analog at the target base partner positionX-RAY DIFFRACTION1.820enzyme,methylase,transferase
92IBT|1|E+ 2IBT|1|FCrystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing 2-aminopurine at the target position and an abasic site analog at the target base partner positionX-RAY DIFFRACTION1.720B-form double helix,double helix,structureenzyme,methylase,transferase
102JG3|1|E+ 2JG3|1|FMtaqI with BAZX-RAY DIFFRACTION1.920B-form double helix,double helix,structureenzyme,methylase,transferase
112IH2|1|E+ 2IH2|1|FCrystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing 5-methylpyrimidin-2(1H)-one at the target base partner positionX-RAY DIFFRACTION1.6120B-form double helix,double helix,structureenzyme,methylase,transferase
121G38|1|E+ 1G38|1|FADENINE-SPECIFIC METHYLTRANSFERASE M. TAQ I/DNA COMPLEXX-RAY DIFFRACTION220B-form double helix,double helix,structureenzyme,methylase,transferase
132IBT|1|B+ 2IBT|1|CCrystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing 2-aminopurine at the target position and an abasic site analog at the target base partner positionX-RAY DIFFRACTION1.720B-form double helix,double helix,structureenzyme,methylase,transferase
142JG3|1|B+ 2JG3|1|CMtaqI with BAZX-RAY DIFFRACTION1.920B-form double helix,double helix,structureenzyme,methylase,transferase
152IH2|1|B+ 2IH2|1|CCrystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing 5-methylpyrimidin-2(1H)-one at the target base partner positionX-RAY DIFFRACTION1.6120B-form double helix,double helix,structureenzyme,methylase,transferase
161G38|1|B+ 1G38|1|CADENINE-SPECIFIC METHYLTRANSFERASE M. TAQ I/DNA COMPLEXX-RAY DIFFRACTION220B-form double helix,double helix,structureenzyme,methylase,transferase
172NP7|1|B+ 2NP7|1|CCrystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing an abasic site analog at the target position and pyrrolo-dC at the target base partner positionX-RAY DIFFRACTION1.920B-form double helix,double helix,structureenzyme,methylase,transferase
183JXZ|1|B+ 3JXZ|1|CBacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing an Abasic Site (across from T)X-RAY DIFFRACTION1.7520B-form double helix,double helix,structureenzyme,hydrolase
193JY1|1|B+ 3JY1|1|CBacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing an Abasic Site (across from C)X-RAY DIFFRACTION1.75420B-form double helix,double helix,structureenzyme,hydrolase
201D8X|1|A+ 1D8X|1|BCRYSTAL STRUCTURE OF DNA SHEARED TANDEM G A BASE PAIRSX-RAY DIFFRACTION1.220double helix,feature,mispair,structure
211D9R|1|A+ 1D9R|1|BCRYSTAL STRUCTURE OF DNA SHEARED TANDEM G-A BASE PAIRSX-RAY DIFFRACTION1.520double helix,feature,mispair,structure
221EMJ|1|C+ 1EMJ|1|BURACIL-DNA GLYCOSYLASE BOUND TO DNA CONTAINING A 4'-THIO-2'DEOXYURIDINE ANALOG PRODUCTX-RAY DIFFRACTION219B-form double helix,double helix,structureenzyme,hydrolase
231Q3F|1|C+ 1Q3F|1|BUracil DNA glycosylase bound to a cationic 1-aza-2'-deoxyribose-containing DNAX-RAY DIFFRACTION1.919B-form double helix,double helix,structureenzyme,hydrolase
242OYT|1|C+ 2OYT|1|BCrystal Structure of UNG2/DNA(TM)X-RAY DIFFRACTION219B-form double helix,double helix,structureenzyme,hydrolase
251I6J|1|C+ 1I6J|1|BCRYSTAL STRUCTURE OF A PSEUDO-16-MER DNA WITH STACKED GUANINES AND TWO G-A MISPAIRS COMPLEXED WITH THE N-TERMINAL FRAGMENT OF MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASEX-RAY DIFFRACTION216B-form double helix,double helix,structureenzyme,polymerase,transferase
26196D|1|A+ 196D|1|BCRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTIONX-RAY DIFFRACTION1.720B-form double helix,double helix,structure
27334D|1|A+ 334D|1|BDEFINING GC-SPECIFICITY IN THE MINOR GROOVE: SIDE-BY-SIDE BINDING OF THE DI-IMIDAZOLE LEXITROPSIN TO C-A-T-G-G-C-C-A-T-GX-RAY DIFFRACTION1.820B-form double helix,double helix,structure
28126D|1|A+ 126D|1|BCRYSTAL STRUCTURE OF CATGGCCATG AND ITS IMPLICATIONS FOR A-TRACT BENDING MODELSX-RAY DIFFRACTION220B-form double helix,double helix,structure
291L4J|1|A+ 1L4J|1|B+ 1L4J|1|C+ 1L4J|1|DHolliday Junction TCGGTACCGA with Na and Ca Binding Sites.X-RAY DIFFRACTION1.8540Holliday junction,structure
301ZFG|1|A+ 1ZFG|1|BCTC Duplex B-DNAX-RAY DIFFRACTION1.7520double helix,structure
313GGI|1|ALocating monovalent cations in one turn of G/C rich B-DNAX-RAY DIFFRACTION0.9810B-form double helix,double helix,structure
323GGK|1|ALocating monovalent cations in one turn of G/C rich B-DNAX-RAY DIFFRACTION0.8710B-form double helix,double helix,structure
331EN9|1|A1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM.X-RAY DIFFRACTION0.98510B-form double helix,double helix,structure
34183D|1|AX-RAY STRUCTURE OF A DNA DECAMER CONTAINING 7, 8-DIHYDRO-8-OXOGUANINEX-RAY DIFFRACTION1.610B-form double helix,double helix,structure
351BD1|1|ACRYSTALLOGRAPHIC STUDY OF ONE TURN OF G/C-RICH B-DNAX-RAY DIFFRACTION1.610B-form double helix,double helix,structure
36122D|1|A+ 122D|1|BDNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLORX-RAY DIFFRACTION1.720B-form double helix,double helix,structure
372D25|1|A+ 2D25|1|BC-C-A-G-G-C-M5C-T-G-G; HELICAL FINE STRUCTURE, HYDRATION, AND COMPARISON WITH C-C-A-G-G-C-C-T-G-GX-RAY DIFFRACTION1.7520B-form double helix,double helix,structure
38123D|1|A+ 123D|1|BDNA HELIX STRUCTURE AND REFINEMENT ALGORITHM: COMPARISON OF MODELS FOR D(CCAGGCM==5==CTGG) DERIVED FROM NUCLSQ, TNT, AND X-PLORX-RAY DIFFRACTION1.720B-form double helix,double helix,structure
39158D|1|A+ 158D|1|BCRYSTALLOGRAPHIC ANALYSIS OF C-C-A-A-G-C-T-T-G-G AND ITS IMPLICATIONS FOR BENDING IN B-DNAX-RAY DIFFRACTION1.920B-form double helix,double helix,structure
401P4Z|1|AEffect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-RAY DIFFRACTION210B-form double helix,double helix,structure
415DNB|1|ASTRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-G-T-T-G-G AND COMPARISON WITH ISOMORPHOUS DECAMERS C-C-A-A-G-A-T-T-G-G AND C-C-A-G-G-C-C-T-G-GX-RAY DIFFRACTION1.410B-form double helix,double helix,structure
421D61|1|ATHE STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-I-T-T-G-G: MONOCLINIC FORMX-RAY DIFFRACTION1.310B-form double helix,double helix,structure
431EN3|1|A1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUMX-RAY DIFFRACTION0.98510B-form double helix,double helix,structure
442OKS|1|AX-ray Structure of a DNA Repair Substrate Containing an Alkyl Interstrand Crosslink at 1.65 ResolutionX-RAY DIFFRACTION1.6510B-form double helix,double helix,structure
451CW9|1|C+ 1CW9|1|DDNA DECAMER WITH AN ENGINEERED CROSSLINK IN THE MINOR GROOVEX-RAY DIFFRACTION1.5520B-form double helix,double helix,structure
461EN8|1|A1 A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUMX-RAY DIFFRACTION0.98510B-form double helix,double helix,structure
471D62|1|ATHE STRUCTURE OF A /B-DNA$ DECAMER WITH AN I(SLASH)*A MISMATCH AND COMPARISON WITH THE G(SLASH)*A MISMATCHX-RAY DIFFRACTION210B-form double helix,double helix,structure
483DNB|1|AHELIX GEOMETRY, HYDRATION, AND G.A MISMATCH IN A B-DNA DECAMERX-RAY DIFFRACTION1.310B-form double helix,double helix,feature,mispair,structure
491ZF5|1|AGCT duplex B-DNAX-RAY DIFFRACTION0.9910B-form double helix,double helix,structure
501ENE|1|A1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM.X-RAY DIFFRACTION0.98510B-form double helix,double helix,structure
513I5E|1|AAllosteric Modulation of DNA by Small MoleculesX-RAY DIFFRACTION0.9810B-form double helix,double helix,structure
521CW9|1|A+ 1CW9|1|BDNA DECAMER WITH AN ENGINEERED CROSSLINK IN THE MINOR GROOVEX-RAY DIFFRACTION1.5520B-form double helix,double helix,structure
53365D|1|A+ 365D|1|BSTRUCTURAL BASIS FOR G C RECOGNITION IN THE DNA MINOR GROOVEX-RAY DIFFRACTION220B-form double helix,double helix,structure
541ZFF|1|ATTC Duplex B-DNAX-RAY DIFFRACTION0.9410double helix,structure
552WIW|1|C+ 2WIW|1|DCrystal structures of Holliday junction resolvases from Archaeoglobus fulgidus bound to DNA substrateX-RAY DIFFRACTION1.820B-form double helix,double helix,structureenzyme,hydrolase,nuclease
561ZFB|1|A+ 1ZFB|1|BGGC Duplex B-DNAX-RAY DIFFRACTION1.6520B-form double helix,double helix,structure
571ZF0|1|A+ 1ZF0|1|BB-DNAX-RAY DIFFRACTION1.520B-form double helix,double helix,structure
581ZF7|1|A+ 1ZF7|1|BGAC Duplex B-DNAX-RAY DIFFRACTION1.0520B-form double helix,double helix,structure
591S1K|1|AINFLUENCE OF GROOVE INTERACTIONS ON DNA HOLLIDAY JUNCTION FORMATIONX-RAY DIFFRACTION1.910B-form double helix,double helix,structure
601WQY|1|A+ 1WQY|1|BX-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solutionX-RAY DIFFRACTION220B-form double helix,double helix,structure
613BDP|1|P+ 3BDP|1|TDNA POLYMERASE I/DNA COMPLEXX-RAY DIFFRACTION1.920double helix,structureenzyme,polymerase,transferase
62307D|1|C+ 307D|1|DStructure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-RAY DIFFRACTION1.8520B-form double helix,double helix,structure
63307D|1|E+ 307D|1|FStructure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-RAY DIFFRACTION1.8520B-form double helix,double helix,structure
64307D|1|A+ 307D|1|BStructure of a DNA analog of the primer for HIV-1 RT second strand synthesisX-RAY DIFFRACTION1.8520B-form double helix,double helix,structure
651DA3|1|A+ 1DA3|1|BTHE CRYSTAL STRUCTURE OF THE TRIGONAL DECAMER C-G-A-T-C-G-6MEA-T-C-G: A B-DNA HELIX WITH 10.6 BASE-PAIRS PER TURNX-RAY DIFFRACTION220B-form double helix,double helix,structure
661JGG|1|C+ 1JGG|1|DEven-skipped Homeodomain Complexed to AT-rich DNAX-RAY DIFFRACTION220B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription
671D57|1|A+ 1D57|1|BALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-GX-RAY DIFFRACTION220B-form double helix,double helix,structure
681D56|1|A+ 1D56|1|BALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-GX-RAY DIFFRACTION1.720B-form double helix,double helix,structure
691D23|1|A+ 1D23|1|BTHE STRUCTURE OF B-HELICAL C-G-A-T-C-G-A-T-C-G AND COMPARISON WITH C-C-A-A-C-G-T-T-G-G. THE EFFECT OF BASE PAIR REVERSALSX-RAY DIFFRACTION1.520B-form double helix,double helix,structure
701D49|1|A+ 1D49|1|BTHE STRUCTURE OF A B-DNA DECAMER WITH A CENTRAL T-A STEP: C-G-A-T-T-A-A-T-C-GX-RAY DIFFRACTION1.520B-form double helix,double helix,structure
711ZFC|1|A+ 1ZFC|1|BATC Duplex B-DNAX-RAY DIFFRACTION220B-form double helix,double helix,structure
721IKK|1|A+ 1IKK|1|BIntrinsic Bending and Deformability at the T-A step of CCTTTAAAGG: A Comparative Analysis of T-A and A-T steps within A-tractsX-RAY DIFFRACTION1.620B-form double helix,double helix,structure
731SK5|1|A+ 1SK5|1|BThe ultra-high resolution structure of d(CTTTTAAAAG)2: modulation of bending by T-A steps and its role in DNA recognitionX-RAY DIFFRACTION0.8920B-form double helix,double helix,structure
742VOA|1|C+ 2VOA|1|DStructure of an AP Endonuclease from Archaeoglobus fulgidusX-RAY DIFFRACTION1.720double helix,structureenzyme,hydrolase,lyase,nuclease
751SM5|1|C+ 1SM5|1|DCrystal Structure of a DNA Decamer Containing a Thymine-dimerX-RAY DIFFRACTION220B-form double helix,double helix,structure
761SM5|1|A+ 1SM5|1|BCrystal Structure of a DNA Decamer Containing a Thymine-dimerX-RAY DIFFRACTION220B-form double helix,double helix,structure
771BC8|1|A+ 1BC8|1|BSTRUCTURES OF SAP-1 BOUND TO DNA SEQUENCES FROM THE E74 AND C-FOS PROMOTERS PROVIDE INSIGHTS INTO HOW ETS PROTEINS DISCRIMINATE BETWEEN RELATED DNA TARGETSX-RAY DIFFRACTION1.9320B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
783I5L|1|A+ 3I5L|1|BAllosteric Modulation of DNA by Small MoleculesX-RAY DIFFRACTION1.1820B-form double helix,double helix,structure
793OMJ|1|A+ 3OMJ|1|BStructural Basis for Cyclic Py-Im Polyamide Allosteric Inhibition of Nuclear Receptor BindingX-RAY DIFFRACTION0.9520B-form double helix,double helix,structure
803KDE|1|A+ 3KDE|1|BCrystal structure of the THAP domain from D. melanogaster P-element transposase in complex with its natural DNA binding siteX-RAY DIFFRACTION1.7420B-form double helix,double helix,structureDNA replication/repair,enzyme,recombinase,regulatory
813LDY|1|C+ 3LDY|1|BAn extraordinary mechanism of DNA perturbation exhibited by the rare-cutting HNH restriction endonuclease PacIX-RAY DIFFRACTION1.9718B-form double helix,double helix,feature,mispair,structureenzyme,hydrolase,nuclease
821D02|1|C+ 1D02|1|DCRYSTAL STRUCTURE OF MUNI RESTRICTION ENDONUCLEASE IN COMPLEX WITH COGNATE DNAX-RAY DIFFRACTION1.720B-form double helix,double helix,structureenzyme,hydrolase,nuclease
831NR8|1|AThe crystal structure of a D-Lysine-based chiral PNA-DNA duplexX-RAY DIFFRACTION1.660NAKB_NA_annotationNAKB_protein_annotation
841S23|1|ACrystal Structure Analysis of the B-DNA Decamer CGCAATTGCGX-RAY DIFFRACTION1.610B-form double helix,double helix,structure
85473D|1|A+ 473D|1|BNI2+/GUANINE INTERACTIONS AND NETROPSIN/GUANINE STACKING IN D(CGTATATACG)2X-RAY DIFFRACTION1.5820B-form double helix,double helix,structure
861SA3|1|C+ 1SA3|1|DAn asymmetric complex of restriction endonuclease MspI on its palindromic DNA recognition siteX-RAY DIFFRACTION1.9518B-form double helix,double helix,structureenzyme,hydrolase,nuclease
871SA3|1|E+ 1SA3|1|FAn asymmetric complex of restriction endonuclease MspI on its palindromic DNA recognition siteX-RAY DIFFRACTION1.9518B-form double helix,double helix,structureenzyme,hydrolase,nuclease
881WD0|1|B+ 1WD0|1|CCrystal structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamersX-RAY DIFFRACTION1.920chromatin,nucleosome,structural
893PA0|1|BCrystal Structure of Chiral Gamma-PNA with Complementary DNA Strand: Insight Into the Stability and Specificity of Recognition an Conformational PreorganizationX-RAY DIFFRACTION1.60NAKB_NA_annotationNAKB_protein_annotation
903PA0|1|ACrystal Structure of Chiral Gamma-PNA with Complementary DNA Strand: Insight Into the Stability and Specificity of Recognition an Conformational PreorganizationX-RAY DIFFRACTION1.60NAKB_NA_annotationNAKB_protein_annotation
912BDP|1|T+ 2BDP|1|PCRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNAX-RAY DIFFRACTION1.819B-form double helix,double helix,structureenzyme,polymerase,transferase
923HPO|1|C+ 3HPO|1|BCrystal structure of fragment DNA polymerase I from Bacillus stearothermophilus Y714S mutant bound to G:T mismatchX-RAY DIFFRACTION1.7519B-form double helix,double helix,structureenzyme,polymerase,transferase
93318D|1|A+ 318D|1|BCRYSTAL STRUCTURES OF D(CCGGGCC(BR)5CGG)-HEXAGONAL FORMX-RAY DIFFRACTION220A-form double helix,double helix,structure
941M77|1|ANear Atomic Resolution Crystal Structure of an A-DNA Decamer d(CCCGATCGGG): Cobalt Hexammine Interactions with A-DNAX-RAY DIFFRACTION1.2510A-form double helix,double helix,structure
951ZF6|1|A+ 1ZF6|1|BTGG DUPLEX A-DNAX-RAY DIFFRACTION1.520A-form double helix,double helix,structure
961ZEY|1|A+ 1ZEY|1|BCGG A-DNAX-RAY DIFFRACTION1.720double helix,structure
971XUX|1|A+ 1XUX|1|BStructural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-RAY DIFFRACTION1.320A-form double helix,double helix,structure
981ZEX|1|A+ 1ZEX|1|BCCG A-DNAX-RAY DIFFRACTION1.6520A-form double helix,double helix,structure
991I5W|1|A+ 1I5W|1|BA-DNA DECAMER GCGTA(TLN)ACGCX-RAY DIFFRACTION1.420A-form double helix,double helix,structure
1003OZ4|1|A+ 3OZ4|1|BR-Methyl Carbocyclic LNAX-RAY DIFFRACTION1.5920A-form double helix,double helix,structure
1011Y84|1|A+ 1Y84|1|BCrystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(imidazolyl)ethyl] Thymidine (T*)X-RAY DIFFRACTION1.620A-form double helix,double helix,structure
1021KGK|1|A+ 1KGK|1|BDirect Observation of a Cytosine Analog that Forms Five Hydrogen Bonds to Guanosine; Guanyl G-ClampX-RAY DIFFRACTION120A-form double helix,double helix,structure
1031DPL|1|A+ 1DPL|1|BA-DNA DECAMER GCGTA(T23)TACGC WITH INCORPORATED 2'-METHOXY-3'-METHYLENEPHOSPHATE-THYMIDINEX-RAY DIFFRACTION0.8320A-form double helix,double helix,structure
1043EY2|1|A+ 3EY2|1|BA Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High ResolutionX-RAY DIFFRACTION1.0420A-form double helix,double helix,structure
1051R3G|1|A+ 1R3G|1|B1.16A X-ray structure of the synthetic DNA fragment with the incorporated 2'-O-[(2-Guanidinium)ethyl]-5-methyluridine residuesX-RAY DIFFRACTION1.1620A-form double helix,double helix,structure
1061I0G|1|A+ 1I0G|1|B1.45 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-FLUOROETHYL THYMINE IN PLACE OF T6, MEDIUM NA-SALTX-RAY DIFFRACTION1.4520A-form double helix,double helix,structure
107412D|1|A+ 412D|1|BDUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-METHYL-[TRI(OXYETHYL)] RIBONUCLEOSIDEX-RAY DIFFRACTION1.6520double helix,structure
1081MA8|1|A+ 1MA8|1|BA-DNA decamer GCGTA(UMS)ACGC with incorporated 2'-methylseleno-uridineX-RAY DIFFRACTION1.320A-form double helix,double helix,structure
1093OZ5|1|A+ 3OZ5|1|BS-Methyl Carbocyclic LNAX-RAY DIFFRACTION1.3620A-form double helix,double helix,structure
110410D|1|A+ 410D|1|BDUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-ETHOXYMETHYLENE RIBONUCLEOSIDEX-RAY DIFFRACTION1.620A-form double helix,double helix,structure
1113OZ3|1|A+ 3OZ3|1|BVinyl Carbocyclic LNAX-RAY DIFFRACTION1.5720A-form double helix,double helix,structure
1121YB9|1|A+ 1YB9|1|BCrystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(N,N-dimethylaminooxy)ethyl] Thymidine (T*)X-RAY DIFFRACTION1.6520A-form double helix,double helix,structure
1132AXB|1|A+ 2AXB|1|BCrystal Structure Analysis Of A 2-O-[2-(methoxy)ethyl]-2-thiothymidine Modified Oligodeoxynucleotide DuplexX-RAY DIFFRACTION1.6120A-form double helix,double helix,structure
1141XUW|1|A+ 1XUW|1|BStructural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-RAY DIFFRACTION1.2520A-form double helix,double helix,structure
1151YBC|1|A+ 1YBC|1|BCrystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(benzyloxy)ethyl] Thymidine (T*)X-RAY DIFFRACTION1.820A-form double helix,double helix,structure
1161Y8V|1|A+ 1Y8V|1|BCrystal structure of the A-DNA GCGTAT*CGC with a 2'-O-propyl Thymidine (T*)X-RAY DIFFRACTION1.520A-form double helix,double helix,structure
117411D|1|A+ 411D|1|BDUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-METHOXYETHYL RIBONUCLEOSIDEX-RAY DIFFRACTION1.9320A-form double helix,double helix,structure
1181I0M|1|A+ 1I0M|1|B1.05 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-FLUOROETHYL THYMINE IN PLACE OF T6, HIGH RB-SALTX-RAY DIFFRACTION1.0520A-form double helix,double helix,structure
1191I0O|1|A+ 1I0O|1|B1.6 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-3'-METHYLENEPHOSPHONATE THYMINE IN PLACE OF T6, HIGH K-SALTX-RAY DIFFRACTION220A-form double helix,double helix,structure
1201I0J|1|A+ 1I0J|1|B1.06 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-3'-METHYLENEPHOSPHONATE (T23) THYMINE IN PLACE OF T6, HIGH CS-SALTX-RAY DIFFRACTION1.0620A-form double helix,double helix,structure
1211I0N|1|A+ 1I0N|1|B1.3 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)] THYMINE IN PLACE OF T6, MEDIUM RB-SALTX-RAY DIFFRACTION1.320A-form double helix,double helix,structure
1221I0P|1|A+ 1I0P|1|B1.3 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)], MEDIUM K-SALTX-RAY DIFFRACTION1.320A-form double helix,double helix,structure
1231I0K|1|A+ 1I0K|1|B1.05 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)] THYMINE IN PLACE OF T6, MEDIUM CS-SALTX-RAY DIFFRACTION1.0520A-form double helix,double helix,structure
1241I0Q|1|A+ 1I0Q|1|B1.3 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-METHYL-[TRI(OXYETHYL)] THYMINE IN PLACE OF T6, MEDIUM NA-SALTX-RAY DIFFRACTION1.320A-form double helix,double helix,structure
1251Y8L|1|A+ 1Y8L|1|BCrystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(trifluoro)ethyl] Thymidine (T*)X-RAY DIFFRACTION1.520A-form double helix,double helix,structure
1261Y7F|1|A+ 1Y7F|1|BCrystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-[hydroxy(methyleneamino)oxy]ethyl] Thymidine (T*)X-RAY DIFFRACTION1.620A-form double helix,double helix,structure
1271I0F|1|A+ 1I0F|1|B1.6 A STRUCTURE OF THE A-DECAMER GCGTATACGC WITH A SINGLE 2'-O-AMINOOXYETHYL THYMINE IN PLACE OF T6, BA-FORMX-RAY DIFFRACTION1.620A-form double helix,double helix,structure
1281Y86|1|A+ 1Y86|1|BCrystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(fluoro)ethyl] Thymidine (T*)X-RAY DIFFRACTION1.720A-form double helix,double helix,structure
1291NZG|1|A+ 1NZG|1|BCrystal structure of A-DNA decamer GCGTA(3ME)ACGC, with a modified 5-methyluridineX-RAY DIFFRACTION1.620A-form double helix,double helix,structure
1301MLX|1|A+ 1MLX|1|BCrystal Structure Analysis of a 2'-O-[2-(Methylthio)-ethyl]-Modified Oligodeoxynucleotide DuplexX-RAY DIFFRACTION1.2520A-form double helix,double helix,structure
1311Y9S|1|A+ 1Y9S|1|BCrystal structure of the A-DNA GCGTAT*CGC with a 2'-O-propargyl Thymidine (T*)X-RAY DIFFRACTION1.5520A-form double helix,double helix,structure
1321Y9F|1|A+ 1Y9F|1|BCrystal structure of the A-DNA GCGTAT*CGC with a 2'-O-allyl Thymidine (T*)X-RAY DIFFRACTION1.620A-form double helix,double helix,structure
1331XUX|1|C+ 1XUX|1|DStructural rationalization of a large difference in RNA affinity despite a small difference in chemistry between two 2'-O-modified nucleic acid analogsX-RAY DIFFRACTION1.320A-form double helix,double helix,structure
1341PWF|1|A+ 1PWF|1|BOne Sugar Pucker Fits All: Pairing Versatility Despite Conformational Uniformity in TNAX-RAY DIFFRACTION1.1620double helix,structure
135440D|1|A+ 440D|1|BHIGH RESOLUTION A-DNA CRYSTAL STRYCTURES OF D(AGGGGCCCCT): AN A-DNA MODEL OF POLY(DG).POLY(DC)X-RAY DIFFRACTION1.120A-form double helix,double helix,structure
136160D|1|A+ 160D|1|BHIGH RESOLUTION CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCCGGCCGGG): NOVEL INTERMOLECULAR BASE-PAIRED G*(G.C) TRIPLETSX-RAY DIFFRACTION1.6520A-form double helix,double helix,structure
137221D|1|A+ 221D|1|BINFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-RAY DIFFRACTION1.920A-form double helix,double helix,structure
138240D|1|A+ 240D|1|BEFFECT OF END BASE STEPS ON DNA FORM: CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCGGGCCCGG)X-RAY DIFFRACTION220A-form double helix,double helix,structure
139213D|1|A+ 213D|1|BCRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCIGGCCM5CGG) AT 1.6 ANGSTROMS SHOWING THE UNEXPECTED WOBBLE I.M5C BASE PAIRX-RAY DIFFRACTION1.620A-form double helix,double helix,structure
140137D|1|A+ 137D|1|BA-DNA DECAMER D(GCGGGCCCGC)-ORTHORHOMBIC CRYSTAL FORMX-RAY DIFFRACTION1.720A-form double helix,double helix,structure
141414D|1|C+ 414D|1|D5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3'X-RAY DIFFRACTION1.920double helix,structure
142414D|1|A+ 414D|1|B5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3'X-RAY DIFFRACTION1.920double helix,structure
143395D|1|ACRYSTAL STRUCTURES OF TWO ISOMORPHOUS A-DNA DECAMERS D(GTACGCGTAC) AND D(GGCCGCGGCC)X-RAY DIFFRACTION1.910A-form double helix,double helix,structure
144260D|1|ACRYSTAL STRUCTURE OF THE SELF-COMPLEMENTARY 5'-PURINE START DECAMER D(GCACGCGTGC) IN THE A-DNA CONFORMATION-PART IIX-RAY DIFFRACTION1.910A-form double helix,double helix,structure
1453IFF|1|A+ 3IFF|1|B2'-SeMe-A modified DNA decamerX-RAY DIFFRACTION1.7520double helix,structure
1462B1B|1|A+ 2B1B|1|B5'-D(*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3' Zif268 binding siteX-RAY DIFFRACTION1.920A-form double helix,double helix,structure
147396D|1|ACRYSTAL STRUCTURES OF TWO ISOMOPHOUS A-DNA DECAMERS D(GTACGCGTAC) AND D(GGCCGCGGCC)X-RAY DIFFRACTION1.810A-form double helix,double helix,structure
148348D|1|AX-RAY CRYSTAL STRUCTURES OF THE DECAMER DGACCGCGGTC: LOW SALT CONCENTRATIONX-RAY DIFFRACTION1.710A-form double helix,double helix,structure
149349D|1|AX-RAY CRYSTAL STRUCTURES OF THE DECAMER DGACCGCGGTC: HIGH SALT CONCENTRATIONX-RAY DIFFRACTION1.910A-form double helix,double helix,structure
150327D|1|ACRYSTAL STRUCTURES OF D(GM5CGM5CGCGCGC)X-RAY DIFFRACTION1.9410A-form double helix,double helix,structure
1511DNZ|1|AA-DNA DECAMER ACCGGCCGGT WITH MAGNESIUM BINDING SITESX-RAY DIFFRACTION1.610A-form double helix,double helix,structure
152212D|1|AINFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-RAY DIFFRACTION1.910A-form double helix,double helix,structure
1531D13|1|AMOLECULAR STRUCTURE OF AN A-DNA DECAMER D(ACCGGCCGGT)X-RAY DIFFRACTION210A-form double helix,double helix,structure
154138D|1|AA-DNA DECAMER D(GCGGGCCCGC)-HEXAGONAL CRYSTAL FORMX-RAY DIFFRACTION1.810A-form double helix,double helix,structure
155220D|1|AINFLUENCE OF COUNTER-IONS ON THE CRYSTAL STRUCTURES OF DNA DECAMERS: BINDING OF [CO(NH3)6]3+ AND BA2+ TO A-DNAX-RAY DIFFRACTION210A-form double helix,double helix,structure
1561ZFA|1|A+ 1ZFA|1|BGGA Duplex A-DNAX-RAY DIFFRACTION1.5620A-form double helix,double helix,structure
157383D|1|A+ 383D|1|BHydration and recognition of methylated CPG steps in DNAX-RAY DIFFRACTION1.720A-form double helix,double helix,structure
1581ZF8|1|A+ 1ZF8|1|BGGT Duplex A-DNAX-RAY DIFFRACTION1.4820A-form double helix,double helix,structure
1591ZF1|1|A+ 1ZF1|1|BCCC A-DNAX-RAY DIFFRACTION1.3520A-form double helix,double helix,structure
1602FIJ|1|A+ 2FIJ|1|BCrystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-aU-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and Arabino-Uridine (aU)X-RAY DIFFRACTION1.1920double helix,structure
1612FIL|1|C+ 2FIL|1|DCrystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-faT-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and 2'-Fluoroarabino-Thymidine (faT)X-RAY DIFFRACTION1.6920double helix,structure
1622FIL|1|A+ 2FIL|1|BCrystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-faT-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and 2'-Fluoroarabino-Thymidine (faT)X-RAY DIFFRACTION1.6920double helix,structure
1631ZF9|1|A+ 1ZF9|1|BGGG Duplex A-DNAX-RAY DIFFRACTION1.3820A-form double helix,double helix,structure
164441D|1|AHIGH RESOLUTION A-DNA CRYSTAL STRYCTURES OF D(AGGGGCCCCT): AN A-DNA MODEL OF POLY(DG).POLY(DC)X-RAY DIFFRACTION1.510double helix,structure
165238D|1|ACRYSTAL STRUCTURE OF THE DNA DECAMER D(AGG(BR)CATGCCT): COMPARISON WITH D(AGGCATGCCT) AND IMPLICATIONS FOR COBALT HEXAMMINE BINDING TO DNAX-RAY DIFFRACTION210A-form double helix,double helix,structure
166232D|1|ATHE HIGH RESOLUTION CRYSTAL STRUCTURE OF THE DNA DECAMER D(AGGCATGCCT)X-RAY DIFFRACTION1.310A-form double helix,double helix,structure
1671L6B|1|A+ 1L6B|1|BCRYSTAL STRUCTURE ANALYSIS OF THE ALL DNA HOLLIDAY JUNCTION STRUCTURE OF CCGGTACM5CGGX-RAY DIFFRACTION1.520Holliday junction,structure
1681NQS|1|A+ 1NQS|1|BStructural Characterisation of the Holliday Junction formed by the sequence d(TCGGTACCGA) at 1.97 AX-RAY DIFFRACTION1.9720Holliday junction,structure
1691NVY|1|A+ 1NVY|1|BStrontium bound to the Holliday junction sequence d(TCGGTACCGA)4X-RAY DIFFRACTION1.520Holliday junction,structure
1701M6G|1|A+ 1M6G|1|BStructural Characterisation of the Holliday Junction TCGGTACCGAX-RAY DIFFRACTION1.65220Holliday junction,structure
1711ZF3|1|A+ 1ZF3|1|BATC Four-stranded DNA Holliday JunctionX-RAY DIFFRACTION1.8420Holliday junction,structure
1721ZF4|1|A+ 1ZF4|1|BATC Four-stranded DNA Holliday JunctionX-RAY DIFFRACTION1.6520Holliday junction,structure
1732ORF|1|A+ 2ORF|1|BDirecting Macromolecular Conformation Through Halogen BondsX-RAY DIFFRACTION1.8520Holliday junction,structure
1742ORG|1|A+ 2ORG|1|BDirecting Macromolecular Conformation Through Halogen BondsX-RAY DIFFRACTION220Holliday junction,structure
1751ZEZ|1|A+ 1ZEZ|1|BACC Holliday JunctionX-RAY DIFFRACTION220Holliday junction,structure
1761NT8|1|A+ 1NT8|1|BStructural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 2.00 AX-RAY DIFFRACTION220Holliday junction,structure
1771NVN|1|A+ 1NVN|1|BStructural Characterisation of the Holliday junction formed by the sequence CCGGTACCGG at 1.8 AX-RAY DIFFRACTION1.820Holliday junction,structure
1781P4Y|1|A+ 1P4Y|1|BEffect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-RAY DIFFRACTION1.720Holliday junction,structure
1792ORH|1|A+ 2ORH|1|BDirecting Macromolecular Conformation Through Halogen BondsX-RAY DIFFRACTION1.920Holliday junction,structure
1803PBX|1|A+ 3PBX|1|BStrontium bound to the sequence d(CCGGCGCCGG)X-RAY DIFFRACTION1.87920Holliday junction,structure
1811ZF2|1|A+ 1ZF2|1|BFour-stranded DNA Holliday Junction (CCC)X-RAY DIFFRACTION1.9520Holliday junction,structure
1823IGT|1|A+ 3IGT|1|B+ 3IGT|1|C+ 3IGT|1|DA rare nucleotide base tautomer in the structure of an asymmetric DNA junctionX-RAY DIFFRACTION1.940Holliday junction,structure
1831P54|1|A+ 1P54|1|BEffect of Sequence on the Conformational Geometry of DNA Holliday JunctionsX-RAY DIFFRACTION1.920Holliday junction,structure
1842GWA|1|A+ 2GWA|1|BCrystal Structure of a Complex Formed Between the DNA Holliday Junction and a Bis-Acridine Molecule.X-RAY DIFFRACTION1.7520Holliday junction,structure
1852B2B|1|A+ 2B2B|1|BStructural distortions in psoralen cross-linked DNAX-RAY DIFFRACTION1.520Holliday junction,structure
1861XJV|1|BCrystal structure of human POT1 bound to telomeric single-stranded DNA (TTAGGGTTAG)X-RAY DIFFRACTION1.7310chromatin,structural,telomere
1872FR4|1|MStructure of Fab DNA-1 complexed with a stem-loop DNA ligandX-RAY DIFFRACTION1.9510antibody,immune system,regulatory
1882FR4|1|NStructure of Fab DNA-1 complexed with a stem-loop DNA ligandX-RAY DIFFRACTION1.9510antibody,immune system,regulatory

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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