Equivalence class DNA_2.5_21697.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2PKV|1|A+ 2PKV|1|B (rep) | 5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3' | D-(GGTATACC) ambient pressure | X-ray diffraction | 1.6 | 16 | 2007-07-24 | ||||
| 2 | 1PFE|1|A | 5'-D(*GP*CP*GP*TP*AP*CP*GP*C)-3' | Echinomycin-(gcgtacgc)2 complex | X-ray diffraction | 1.1 | 8 | 2004-06-08 | ||||
| 3 | 2HC7|1|A | 5'-D(*GP*(2ST)P*GP*TP*AP*CP*AP*C)-3' | 2'-selenium-T A-DNA [G(TSe)GTACAC] | X-ray diffraction | 1.4 | 8 | 2006-07-04 | ||||
| 4 | 3HG8|1|A | 5'-D(*GP*(UMS)P*GP*(US2)P*AP*CP*AP*C)-3' | synthetic construct | Crystal Structure of 5-SMe Derivatized DNA | X-ray diffraction | 1.38 | 8 | 2009-07-21 | |||
| 5 | 1Z7I|1|A | 5'-D(*GP*(UMS)P*GP*TP*AP*CP*AP*C)-3' | 2'-Me-Se Derivitation of A-DNA Octamer G(UMSe)GTACAC | X-ray diffraction | 1.28 | 8 | 2005-04-05 | ||||
| 6 | 1R3Z|1|A | 5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*C)-3' | Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers | X-ray diffraction | 1.7 | 8 | 2003-12-23 | ||||
| 7 | 3LTU|1|A | 5'-D(*GP*(UMS)P*GP*(T5S)P*AP*CP*AP*C)-3' | synthetic construct | 5-SeMe-dU containing DNA 8mer | X-ray diffraction | 1.4 | 8 | 2010-03-09 | |||
| 8 | 2PL4|1|A+ 2PL4|1|B | Synthetic DNA octamer | D-(GGTATACC) under 0.55 GPa hydrostatic pressure | X-ray diffraction | 1.65 | 16 | 2007-07-24 | ||||
| 9 | 3IKI|1|A | 5'-D(*GP*(UMS)P*GP*(US2)P*AP*CP*AP*C)-3' | 5-SMe-dU containing DNA octamer | X-ray diffraction | 1.38 | 8 | 2010-03-09 | ||||
| 10 | 3IFI|1|A | DNA (5'-D(*GP*TP*(XUG)P*TP*AP*CP*AP*C)-3') | 2'-SeMe-dG modified octamer DNA | X-ray diffraction | 1.2 | 8 | 2009-08-11 | ||||
| 11 | 3IJK|1|A | 5'-D(*GP*(UMS)P*GP*(T5O)P*AP*CP*AP*C)-3' | synthetic construct | 5-OMe modified DNA 8mer | X-ray diffraction | 1.3 | 8 | 2009-10-06 | |||
| 12 | 3GO3|1|A+ 3GO3|1|B | 5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3' | Interactions of an echinomycin-DNA complex with manganese(II) ions | X-ray diffraction | 1.1 | 16 | 2009-03-31 | ||||
| 13 | 1XVK|1|A | 5'-D(*GP*CP*GP*TP*AP*CP*GP*C)-3' | X-ray structure of an Echinomycin-(GCGTACGC)2 complex | X-ray diffraction | 1.26 | 8 | 2005-04-12 | ||||
| 14 | 2A7E|1|S | DNA (5'-D(*CP*CP*CP*TP*AP*GP*GP*G)-3') | On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- The Optimal Data Collection Wavelength | X-ray diffraction | 1.66 | 8 | 2005-07-19 | ||||
| 15 | 3LTR|1|A | 5'-D(*GP*(UMS)P*GP*(T5O)P*AP*CP*AP*C)-3' | 5-OMe-dU containing DNA 8mer | X-ray diffraction | 1.3 | 8 | 2010-03-09 | ||||
| 16 | 2PL8|1|A+ 2PL8|1|B | 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3' | D(GTATACC) under hydrostatic pressure of 1.04 GPa | X-ray diffraction | 1.65 | 16 | 2007-07-24 | ||||
| 17 | 2NSK|1|A | 5'-D(*GP*(UMS)P*GP*(T4S)P*AP*CP*AP*C)-3' | Doubled Modified Selenium DNA | X-ray diffraction | 1.5 | 8 | 2006-11-14 | ||||
| 18 | 1R41|1|A | 5'-D(*GP*CP*GP*CP*GP*(5CM)P*GP*(5CM))-3' | Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers | X-ray diffraction | 1.9 | 8 | 2003-12-23 | ||||
| 19 | 3KXT|1|B+ 3KXT|1|C | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Crystal structure of Sulfolobus Cren7-dsDNA complex | X-ray diffraction | 1.602 | 16 | 2010-06-09 | ||||
| 20 | 3HGD|1|A+ 3HGD|1|B | 5'-D(*GP*(UMS)P*GP*(US3)P*AP*CP*AP*C)-3' | Crystal Structure of 2-Se-Thymidine Derivatized DNA | X-ray diffraction | 1.57 | 16 | 2009-08-18 | ||||
| 21 | 2GPX|1|A | 5'-D(*GP*(UMS)P*GP*(BRU)P*AP*CP*AP*C)-3' | 2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC | X-ray diffraction | 1.6 | 8 | 2006-05-23 | ||||
| 22 | 1WTO|1|B+ 1WTO|1|C | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Hyperthermophile chromosomal protein SAC7D double mutant V26F/M29F in complex with DNA GCGATCGC | X-ray diffraction | 1.5 | 16 | 2005-02-22 | ||||
| 23 | 2ADW|1|A+ 2ADW|1|C | 5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3' | Crystal structure of Echinomycin-(ACGTACGT)2 solved by SAD | X-ray diffraction | 1.6 | 16 | 2006-03-28 | ||||
| 24 | 2ADW|1|E+ 2ADW|1|G | 5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3' | Crystal structure of Echinomycin-(ACGTACGT)2 solved by SAD | X-ray diffraction | 1.6 | 16 | 2006-03-28 | ||||
| 25 | 3K18|1|A | 5'-D(*GP*(UMS)P*GP*(TTI)P*AP*CP*AP*C)-3' | Tellurium modified DNA-8mer | X-ray diffraction | 1.5 | 8 | 2010-10-06 | ||||
| 26 | 2PLB|1|A+ 2PLB|1|B | 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3' | D(GTATACC) under hydrostatic pressure of 1.39 GPa | X-ray diffraction | 1.6 | 16 | 2007-07-24 | ||||
| 27 | 1WTQ|1|B+ 1WTQ|1|C | 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GTAATTAC | X-ray diffraction | 1.7 | 16 | 2005-02-22 | ||||
| 28 | 1WTV|1|B+ 1WTV|1|C | 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC | X-ray diffraction | 1.6 | 16 | 2005-02-22 | ||||
| 29 | 1XVN|1|A | 5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3' | echinomycin (ACGTACGT)2 complex | X-ray diffraction | 1.5 | 8 | 2005-04-12 | ||||
| 30 | 2H05|1|A | 5'-D(*GP*TP*GP*(BRU)P*AP*CP*AP*C)-3' | Br Derivitation of A-DNA Octamer GTG(Ubr)ACAC | X-ray diffraction | 1.8 | 8 | 2006-05-23 | ||||
| 31 | 3BM0|1|A | 5'-D(*GP*(2'-Se-U)P*GP*(5-Se-U)P*AP*CP*AP*C)-3' | Structure of DNA Octamer G(dUSe)G(5-SedU)ACAC | X-ray diffraction | 1.8 | 8 | 2008-06-10 | ||||
| 32 | 1XYI|1|B+ 1XYI|1|C | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Hyperthermophile chromosomal protein Sac7d double mutant Val26Ala/Met29Ala in complex with DNA GCGATCGC | X-ray diffraction | 1.45 | 16 | 2005-02-08 | ||||
| 33 | 1UE4|1|A | 5'-D(*GP*CP*GP*AP*AP*AP*GP*C)-3' | Crystal structure of d(GCGAAAGC) | X-ray diffraction | 1.65 | 8 | 2004-03-09 | ||||
| 34 | 3A4K|1|F+ 3A4K|1|J+ 3A4K|1|E+ 3A4K|1|I | DNA (5'-D(*GP*CP*CP*A)-3'), DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3') | Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolution | X-ray diffraction | 2.17 | 24 | 2009-10-20 | ||||
| 35 | 3A4K|1|H+ 3A4K|1|L+ 3A4K|1|G+ 3A4K|1|K | DNA (5'-D(*GP*CP*CP*A)-3'), DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3') | Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolution | X-ray diffraction | 2.17 | 24 | 2009-10-20 | ||||
| 36 | 2W42|1|P+ 2W42|1|Q | 5'-D(*GP*TP*CP*GP*AP*AP*TP*TP)-3', 5'-D(*TP*TP*CP*GP*AP*CP*GP*CP)-3' | Homo sapiens | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. | X-ray diffraction | 1.9 | 12 | 2008-12-09 | |||
| 37 | 2W42|1|R | 5'-D(*TP*TP*CP*GP*AP*CP*GP*CP)-3' | Homo sapiens | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. | X-ray diffraction | 1.9 | 0 | 2008-12-09 | |||
| 38 | 2W42|1|S | 5'-D(*GP*TP*CP*GP*AP*AP*TP*TP)-3' | Homo sapiens | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. | X-ray diffraction | 1.9 | 0 | 2008-12-09 | |||
| 39 | 3LWH|1|B+ 3LWH|1|C | DNA (5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3') | Crystal structure of Cren7-dsDNA complex | X-ray diffraction | 1.9 | 16 | 2010-05-26 | ||||
| 40 | 3LWI|1|C+ 3LWI|1|D | DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3') | Crystal structure of Cren7-dsDNA complex | X-ray diffraction | 2.3 | 16 | 2010-05-26 | ||||
| 41 | 3LWI|1|E+ 3LWI|1|F | DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3') | Crystal structure of Cren7-dsDNA complex | X-ray diffraction | 2.3 | 16 | 2010-05-26 | ||||
| 42 | 3GPL|1|X | 5'-D(*T*TP*TP*TP*TP*TP*TP*T)-3' | Crystal structure of the ternary complex of RecD2 with DNA and ADPNP | X-ray diffraction | 2.5 | 7 | 2009-06-16 | ||||
| 43 | 3GPL|1|Y | 5'-D(*T*TP*TP*TP*TP*TP*TP*T)-3' | Crystal structure of the ternary complex of RecD2 with DNA and ADPNP | X-ray diffraction | 2.5 | 7 | 2009-06-16 | ||||
| 44 | 3KHC|1|C | DNA (5'-D(P*TP*AP*(MG1)P*TP*GP*CP*CP*T)-3') | Crystal Structure of Escherichia coli AlkB in complex with ssDNA containing a 1-methylguanine lesion | X-ray diffraction | 2.2 | 0 | 2010-01-12 | ||||
| 45 | 3IJN|1|A | 5'-D(*GP*(UMS)P*GP*TP*AP*(5SE)P*AP*C)-3' | 5-SeMe-Cytidine modified DNA 8mer | X-ray diffraction | 1.8 | 8 | 2009-10-06 | ||||
| 46 | 2FJW|1|B+ 2FJW|1|G | 5'-D(*CP*TP*TP*GP*AP*AP*TP*G)-3', 5'-D(P*CP*AP*TP*TP*CP*AP*AP*G)-3' | d(CTTGAATGCATTCAAG) in complex with MMLV RT catalytic fragment | X-ray diffraction | 1.95 | 16 | 2006-06-27 | ||||
| 47 | 2O5C|1|C | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glucose pH 5.5 | X-ray diffraction | 2.35 | 7 | 2007-04-03 | ||||
| 48 | 2O5C|1|D | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glucose pH 5.5 | X-ray diffraction | 2.35 | 7 | 2007-04-03 | ||||
| 49 | 3C2J|1|A+ 3C2J|1|B | DNA (5'-D(*DAP*DAP*DCP*DCP*DGP*DGP*DTP*DT)-3') | Crystal structure analysis of trioxacarcin A covalently bound to d(AACCGGTT) | X-ray diffraction | 1.78 | 16 | 2008-06-03 | ||||
| 50 | 1QSL|1|B | 5'-D(*GP*CP*TP*TP*AP*CP*GP*C)-3' | KLENOW FRAGMENT COMPLEXED WITH SINGLE-STRANDED SUBSTRATE AND EUROPIUM (III) ION | X-ray diffraction | 2.2 | 4 | 1999-06-30 | ||||
| 51 | 1WTR|1|B+ 1WTR|1|C | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GCGATCGC | X-ray diffraction | 1.8 | 16 | 2005-02-22 | ||||
| 52 | 2O19|1|C | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomersae III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 5.5 | X-ray diffraction | 2.45 | 7 | 2007-04-03 | ||||
| 53 | 2O19|1|D | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomersae III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 5.5 | X-ray diffraction | 2.45 | 8 | 2007-04-03 | ||||
| 54 | 2R2T|1|B+ 2R2T|1|G | DNA (5'-D(*DAP*DTP*DTP*DTP*DAP*DGP*DTP*DT)-3'), DNA (5'-D(P*DAP*DAP*DCP*DTP*DAP*DAP*DAP*DT)-3') | d(ATTTAGTTAACTAAAT) complexed with MMLV RT catalytic fragment | X-ray diffraction | 2 | 16 | 2008-07-22 | ||||
| 55 | 1WTP|1|C+ 1WTP|1|D | 5'-D(*GP*CP*GP*AP*(BRU)P*CP*GP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GCGA(UBr)CGC | X-ray diffraction | 1.9 | 16 | 2005-02-22 | ||||
| 56 | 1WTP|1|E+ 1WTP|1|F | 5'-D(*GP*CP*GP*AP*(BRU)P*CP*GP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GCGA(UBr)CGC | X-ray diffraction | 1.9 | 16 | 2005-02-22 | ||||
| 57 | 1WTX|1|B+ 1WTX|1|C | 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant V26A in complex with DNA GTAATTAC | X-ray diffraction | 2.2 | 16 | 2005-02-22 | ||||
| 58 | 1L2B|1|C | 5'-D(*TP*GP*CP*GP*TP*CP*C*(AD2))-3' | MutM (Fpg) DNA End-Product Structure | X-ray diffraction | 2.4 | 0 | 2002-06-14 | ||||
| 59 | 1VAQ|1|A+ 1VAQ|1|B | 5'-D(*TP*TP*GP*GP*CP*CP*AP*A)-3' | synthetic construct | Crystal structure of the Mg2+-(chromomycin A3)2-d(TTGGCCAA)2 complex reveals GGCC binding specificity of the drug dimer chelated by metal ion | X-ray diffraction | 2 | 16 | 2004-06-22 | |||
| 60 | 1VAQ|1|C+ 1VAQ|1|D | 5'-D(*TP*TP*GP*GP*CP*CP*AP*A)-3' | synthetic construct | Crystal structure of the Mg2+-(chromomycin A3)2-d(TTGGCCAA)2 complex reveals GGCC binding specificity of the drug dimer chelated by metal ion | X-ray diffraction | 2 | 16 | 2004-06-22 | |||
| 61 | 2R2R|1|B+ 2R2R|1|G | DNA (5'-D(*DAP*DTP*DTP*DAP*DGP*DTP*DTP*DA)-3'), DNA (5'-D(P*DTP*DAP*DAP*DCP*DTP*DAP*DAP*DT)-3') | d(ATTAGTTATAACTAAT) complexed with MMLV RT catalytic fragment | X-ray diffraction | 2.1 | 16 | 2008-07-22 | ||||
| 62 | 2O59|1|C | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol pH 8.0 | X-ray diffraction | 2.5 | 7 | 2007-04-03 | ||||
| 63 | 2O59|1|D | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol pH 8.0 | X-ray diffraction | 2.5 | 8 | 2007-04-03 | ||||
| 64 | 1OUP|1|C+ 1OUP|1|D | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Crystal structure of the periplasmic endonuclease Vvn complexed with octamer double stranded DNA | X-ray diffraction | 2.3 | 16 | 2003-08-05 | ||||
| 65 | 1OUP|1|F+ 1OUP|1|E | 5'-D(*GP*CP*GP*AP*TP*C)-3', 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Crystal structure of the periplasmic endonuclease Vvn complexed with octamer double stranded DNA | X-ray diffraction | 2.3 | 0 | 2003-08-05 | ||||
| 66 | 2O5E|1|C | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glucose pH 7.0 | X-ray diffraction | 2.5 | 7 | 2007-04-03 | ||||
| 67 | 2O5E|1|D | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glucose pH 7.0 | X-ray diffraction | 2.5 | 7 | 2007-04-03 | ||||
| 68 | 3IGM|1|C+ 3IGM|1|D | 5'-D(*TP*GP*CP*AP*TP*GP*CP*A)-3' | A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA | X-ray diffraction | 2.2 | 15 | 2009-11-10 | ||||
| 69 | 3IGM|1|W+ 3IGM|1|X | 5'-D(*TP*GP*CP*AP*TP*GP*CP*A)-3' | A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA | X-ray diffraction | 2.2 | 16 | 2009-11-10 | ||||
| 70 | 3KQ8|1|A | 5'-D(*GP*(UMS)P*GP*(TTI)P*AP*CP*AP*C)-3' | 5-Te-uridine derivatized DNA-8mer | X-ray diffraction | 1.6 | 8 | 2010-11-17 | ||||
| 71 | 2R2U|1|G+ 2R2U|1|B | DNA (5'-D(*DAP*DTP*DTP*DTP*DAP*DGP*DT)-3'), DNA (5'-D(P*DTP*DAP*DCP*DTP*DAP*DAP*DAP*DT)-3') | Co(III)bleomycinB2 bithiazole/C-terminal tail domain bound to d(ATTTAGTTAACTAAAT) complexed with MMLV RT catalytic fragment | X-ray diffraction | 2.3 | 15 | 2008-07-22 | ||||
| 72 | 2O54|1|C | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 7.0 | X-ray diffraction | 2.5 | 7 | 2007-04-03 | ||||
| 73 | 2O54|1|D | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 7.0 | X-ray diffraction | 2.5 | 8 | 2007-04-03 | ||||
| 74 | 1UE3|1|A | 5'-D(*GP*CP*GP*AP*AP*AP*GP*C)-3' | Crystal structure of d(GCGAAAGC) containing hexaamminecobalt | X-ray diffraction | 2.15 | 8 | 2004-01-13 | ||||
| 75 | 1WTW|1|B+ 1WTW|1|C | 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | Hyperthermophile chromosomal protein SAC7D single mutant V26A in complex with DNA GCGATCGC | X-ray diffraction | 2.2 | 16 | 2005-02-22 | ||||
| 76 | 1PT3|1|C+ 1PT3|1|D | 5'-GCGATCGC-3' | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-ray diffraction | 2.5 | 16 | 2004-03-30 | ||||
| 77 | 1PT3|1|E+ 1PT3|1|F | 5'-GCGATCGC-3' | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-ray diffraction | 2.5 | 16 | 2004-03-30 | ||||
| 78 | 1PT3|1|G+ 1PT3|1|H | 5'-GCGATCGC-3' | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-ray diffraction | 2.5 | 16 | 2004-03-30 | ||||
| 79 | 1JMC|1|B | DNA (5'-D(*CP*CP*CP*CP*CP*CP*CP*C)-3') | SINGLE STRANDED DNA-BINDING DOMAIN OF HUMAN REPLICATION PROTEIN A BOUND TO SINGLE STRANDED DNA, RPA70 SUBUNIT, RESIDUES 183-420 | X-ray diffraction | 2.4 | 8 | 1997-10-16 | ||||
| 80 | 1V15|1|E+ 1V15|1|F | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-ray diffraction | 2.4 | 15 | 2004-06-23 | ||||
| 81 | 1V15|1|G+ 1V15|1|H | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-ray diffraction | 2.4 | 14 | 2004-06-23 | ||||
| 82 | 1V15|1|I+ 1V15|1|J | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-ray diffraction | 2.4 | 15 | 2004-06-23 | ||||
| 83 | 1V15|1|K+ 1V15|1|L | 5'-D(*GP*CP*GP*AP*TP*CP*GP*CP)-3' | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-ray diffraction | 2.4 | 14 | 2004-06-23 | ||||
| 84 | 284D|1|A+ 284D|1|B | DNA (5'-CD(*P*AP*TP*TP*CP*AP*TP*TP*C)-3') | THE BI-LOOP, A NEW GENERAL FOUR-STRANDED DNA MOTIF | X-ray diffraction | 1.1 | 16 | 1997-06-11 | ||||
| 85 | 454D|1|A+ 454D|1|B | 5'-D(*GP*(5IU)P*TP*GP*CP*AP*AP*C)-3' | INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3' | X-ray diffraction | 1.2 | 16 | 2000-02-21 | ||||
| 86 | 454D|1|C+ 454D|1|D | 5'-D(*GP*(5IU)P*TP*GP*CP*AP*AP*C)-3' | INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3' | X-ray diffraction | 1.2 | 16 | 2000-02-21 | ||||
| 87 | 454D|1|E+ 454D|1|F | 5'-D(*GP*(5IU)P*TP*GP*CP*AP*AP*C)-3' | INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3' | X-ray diffraction | 1.2 | 16 | 2000-02-21 | ||||
| 88 | 454D|1|G+ 454D|1|H | 5'-D(*GP*(5IU)P*TP*GP*CP*AP*AP*C)-3' | INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3' | X-ray diffraction | 1.2 | 16 | 2000-02-21 | ||||
| 89 | 454D|1|I+ 454D|1|J | 5'-D(*GP*(5IU)P*TP*GP*CP*AP*AP*C)-3' | INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3' | X-ray diffraction | 1.2 | 16 | 2000-02-21 | ||||
| 90 | 1D78|1|A | DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3') | HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION | X-ray diffraction | 1.4 | 8 | 1993-04-15 | ||||
| 91 | 2PLO|1|A+ 2PLO|1|B | 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3' | D-(GTATACC) low temperature (100K) | X-ray diffraction | 1.4 | 16 | 2008-05-27 | ||||
| 92 | 1D79|1|A | DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3') | HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION | X-ray diffraction | 1.45 | 8 | 1993-04-15 | ||||
| 93 | 1C8C|1|B+ 1C8C|1|C | 5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3' | CRYSTAL STRUCTURES OF THE CHROMOSOMAL PROTEINS SSO7D/SAC7D BOUND TO DNA CONTAINING T-G MISMATCHED BASE PAIRS | X-ray diffraction | 1.45 | 16 | 2001-05-04 | ||||
| 94 | 344D|1|A | DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*(BRU))-3') | DETERMINATION BY MAD-DM OF THE STRUCTURE OF THE DNA DUPLEX D(ACGTACG(5-BRU))2 AT 1.46A AND 100K | X-ray diffraction | 1.46 | 8 | 1997-09-26 | ||||
| 95 | 3FA1|1|A | 5'-D(*DGP*(UMS)P*DGP*(TTI)P*DAP*DCP*DAP*DC)-3' | Crystal Structure of Tellurium Derivatized DNA | X-ray diffraction | 1.5 | 8 | 2009-01-27 | ||||
| 96 | 2DLJ|1|A | 5'-D(*GP*(UMS)P*GP*(BRU)P*AP*CP*AP*C)-3' | 2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC | X-ray diffraction | 1.5 | 8 | 2006-05-23 | ||||
| 97 | 295D|1|A | DNA (5'-D(*AP*TP*GP*CP*GP*CP*AP*T)-3') | CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY | X-ray diffraction | 1.5 | 8 | 1996-12-04 | ||||
| 98 | 2H0N|1|A | 5'-(*(XGL)P*(XTL)P*(XGL)P*(XTL)P*(XAL)P*(XCL)P*(XAL)P*(XCL)-Phosphate)-3' | Structure of the fully modified left-handed cyclohexene nucleic acid sequence GTGTACAC | X-ray diffraction | 1.53 | 8 | 2007-04-24 | ||||
| 99 | 2H0N|1|B | 5'-(*(XGL)P*(XTL)P*(XGL)P*(XTL)P*(XAL)P*(XCL)P*(XAL)P*(XCL)-Phosphate)-3' | Structure of the fully modified left-handed cyclohexene nucleic acid sequence GTGTACAC | X-ray diffraction | 1.53 | 8 | 2007-04-24 | ||||
| 100 | 1JUX|1|A | 5'-D(*IP*TP*IP*TP*AP*CP*AP*C)-3' | 1.6A Resolution Crystal Structures of the DNA Octamers d(IUATATAC) and d(ITITACAC):Binding of Two Distamycin Drugs Side-by-Side | X-ray diffraction | 1.6 | 8 | 2004-01-27 | ||||
| 101 | 340D|1|A | DNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 1.6 | 8 | 1997-07-21 | ||||
| 102 | 2DZ7|1|A | DNA (5'-D(*DGP*DCP*DGP*DAP*DAP*DAP*DGP*DC)-3') | DNA Octaplex Formation with an I-Motif of A-Quartets: The Revised Crystal Structure of d(GCGAAAGC) | X-ray diffraction | 1.6 | 8 | 2007-08-14 | ||||
| 103 | 368D|1|A+ 368D|1|B | DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-ray diffraction | 1.6 | 16 | 1998-07-15 | ||||
| 104 | 306D|1|A | DNA (5'-D(*IP*CP*IP*TP*AP*CP*IP*C)-3') | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICITACIC) | X-ray diffraction | 1.6 | 8 | 1997-09-22 | ||||
| 105 | 481D|1|A | 5'-H(*(6HG)P*(6HT)P*(6HG)P*(6HT)P*(6HA)P*(6HC)P*(6HA)P*(6HC))-3' | CRYSTAL STRUCTURE OF A HEXITOL NUCLEIC ACID (HNA) DUPLEX AT 1.6A RESOLUTION | X-ray diffraction | 1.6 | 8 | 2002-04-27 | ||||
| 106 | 1AZP|1|B+ 1AZP|1|C | DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3') | HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX | X-ray diffraction | 1.6 | 16 | 1999-01-13 | ||||
| 107 | 1BF4|1|B+ 1BF4|1|C | DNA (5'-D(*GP*CP*GP*AP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*5IUP*CP*GP*C)-3') | CHROMOSOMAL DNA-BINDING PROTEIN SSO7D/D(GCGAACGC) COMPLEX | X-ray diffraction | 1.6 | 16 | 1999-11-10 | ||||
| 108 | 118D|1|A | DNA (5'-D(*GP*TP*GP*CP*GP*CP*AP*C)-3') | CRYSTAL AND MOLECULAR STRUCTURE OF D(GTGCGCAC): INVESTIGATION OF THE EFFECTS OF BASE SEQUENCE ON THE CONFORMATION OF OCTAMER DUPLEXES | X-ray diffraction | 1.64 | 8 | 1993-02-11 | ||||
| 109 | 370D|1|A+ 370D|1|B | DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') | synthetic construct | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-ray diffraction | 1.67 | 16 | 1998-07-15 | |||
| 110 | 1V3O|1|A | 5'-D(*GP*(C38)P*GP*AP*GP*AP*GP*C)-3' | Crystal structure of d(GCGAGAGC): the DNA quadruplex structure split from the octaplex | X-ray diffraction | 1.7 | 0 | 2004-06-08 | ||||
| 111 | 1UHY|1|A | 5'-D(*GP*(CBR)P*GP*AP*TP*AP*GP*C)-3' | Crystal structure of d(GCGATAGC): the base-intercalated duplex | X-ray diffraction | 1.7 | 8 | 2004-02-03 | ||||
| 112 | 115D|1|A+ 115D|1|B | DNA (5'-D(*GP*GP*(BRU)P*AP*(BRU)P*AP*CP*C)-3') | ORDERED WATER STRUCTURE IN AN A-DNA OCTAMER AT 1.7 ANGSTROMS RESOLUTION | X-ray diffraction | 1.7 | 16 | 1993-07-15 | ||||
| 113 | 2D94|1|A | DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*C)-3') | THE CONFORMATION OF THE DNA DOUBLE HELIX IN THE CRYSTAL IS DEPENDENT ON ITS ENVIRONMENT | X-ray diffraction | 1.7 | 8 | 1994-01-15 | ||||
| 114 | 1D90|1|A+ 1D90|1|B | DNA (5'-D(*GP*GP*IP*GP*CP*TP*CP*C)-3') | REFINED CRYSTAL STRUCTURE OF AN OCTANUCLEOTIDE DUPLEX WITH I.T MISMATCHED BASE PAIRS | X-ray diffraction | 1.7 | 16 | 1993-07-15 | ||||
| 115 | 1V3O|1|B | 5'-D(*GP*(C38)P*GP*AP*GP*AP*GP*C)-3' | Crystal structure of d(GCGAGAGC): the DNA quadruplex structure split from the octaplex | X-ray diffraction | 1.7 | 0 | 2004-06-08 | ||||
| 116 | 2H9S|1|A | 5'-D(*(XCT)P*(XGU)P*(XAD)P*(XAD)P*(XTH)P*(XTH)P*(XCT)P*(XGU))-3' | Crystal Structure of Homo-DNA and Nature's Choice of Pentose over Hexose in the Genetic System | X-ray diffraction | 1.75 | 0 | 2006-12-12 | ||||
| 117 | 341D|1|A | DNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 1.75 | 8 | 1997-07-21 | ||||
| 118 | 2H9S|1|B | 5'-D(*(XCT)P*(XGU)P*(XAD)P*(XAD)P*(XTH)P*(XTH)P*(XCT)P*(XGU))-3' | Crystal Structure of Homo-DNA and Nature's Choice of Pentose over Hexose in the Genetic System | X-ray diffraction | 1.75 | 0 | 2006-12-12 | ||||
| 119 | 3FSI|1|B+ 3FSI|1|G | 5'-D(*CP*TP*TP*AP*AP*TP*TP*C)-3', 5'-D(P*GP*AP*AP*TP*TP*AP*AP*G)-3' | Crystal structure of a trypanocidal 4,4'-Bis(imidazolinylamino)diphenylamine bound to DNA | X-ray diffraction | 1.75 | 16 | 2009-05-19 | ||||
| 120 | 9DNA|1|A | DNA (5'-D(*GP*CP*CP*CP*GP*GP*GP*C)-3') | CRYSTAL STRUCTURE ANALYSIS OF AN A-DNA FRAGMENT AT 1.8 ANGSTROMS RESOLUTION. D(GCCCGGGC) | X-ray diffraction | 1.8 | 8 | 1988-01-16 | ||||
| 121 | 1VJ4|1|A+ 1VJ4|1|B | 5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3' | SEQUENCE-DEPENDENT CONFORMATION OF AN A-DNA DOUBLE HELIX: THE CRYSTAL STRUCTURE OF THE OCTAMER D(G-G-T-A-T-A-C-C) | X-ray diffraction | 1.8 | 16 | 1989-01-11 | ||||
| 122 | 159D|1|A | DNA (5'-D(*IP*CP*IP*CP*IP*CP*IP*C)-3') | SIDE BY SIDE BINDING OF TWO DISTAMYCIN A DRUGS IN THE MINOR GROOVE OF AN ALTERNATING B-DNA DUPLEX | X-ray diffraction | 1.8 | 8 | 1995-02-07 | ||||
| 123 | 1V3N|1|A | 5'-D(*GP*(CBR)P*GP*AP*GP*AP*GP*C)-3' | Crystal structure of d(GCGAGAGC): the DNA quadruplex structure split from the octaplex | X-ray diffraction | 1.8 | 0 | 2004-06-08 | ||||
| 124 | 1V3N|1|B | 5'-D(*GP*(CBR)P*GP*AP*GP*AP*GP*C)-3' | Crystal structure of d(GCGAGAGC): the DNA quadruplex structure split from the octaplex | X-ray diffraction | 1.8 | 0 | 2004-06-08 | ||||
| 125 | 1ZTW|1|B+ 1ZTW|1|G | CTTAATTC, GAATTAAG | d(CTTAATTCGAATTAAG) complexed with Moloney Murine Leukemia Virus Reverse Transcriptase catalytic fragment | X-ray diffraction | 1.8 | 16 | 2005-08-30 | ||||
| 126 | 2FJX|1|B+ 2FJX|1|G | 5'-D(*CP*TP*TP*GP*AP*AP*TP*G)-3', 5'-D(P*CP*AP*TP*TP*CP*AP*AP*G)-3' | RT29 bound to D(CTTGAATGCATTCAAG) in complex with MMLV RT catalytic fragment | X-ray diffraction | 1.8 | 16 | 2006-06-27 | ||||
| 127 | 337D|1|A | DNA (5'-D(*GP*CP*GP*(5CM)P*GP*(5CM)P*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 1.85 | 8 | 1997-07-21 | ||||
| 128 | 345D|1|A | DNA (5'-D(*GP*(5CM)P*GP*CP*GP*CP*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 1.85 | 8 | 1997-08-29 | ||||
| 129 | 338D|1|A | DNA (5'-D(*GP*(5CM)P*GP*CP*GP*CP*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 1.85 | 8 | 1997-07-21 | ||||
| 130 | 1ZTT|1|B+ 1ZTT|1|G | 5'-D(*CP*TP*TP*AP*AP*TP*TP*C)-3', 5'-D(P*GP*AP*AP*TP*TP*AP*AP*G)-3' | Netropsin bound to d(CTTAATTCGAATTAAG) in complex with MMLV RT catalytic fragment | X-ray diffraction | 1.85 | 16 | 2005-08-30 | ||||
| 131 | 243D|1|A | DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3') | STRUCTURE OF THE DNA OCTANUCLEOTIDE D(ACGTACGT)2 | X-ray diffraction | 1.9 | 8 | 1996-02-26 | ||||
| 132 | 371D|1|A+ 371D|1|B | DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') | synthetic construct | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-ray diffraction | 1.9 | 16 | 1998-07-15 | |||
| 133 | 317D|1|A | DNA (5'-D(*CP*CP*CP*TP*AP*GP*GP*G)-3') | STRUCTURE OF D(CCTAGGG): COMPARISON WITH NINE ISOMORPHOUS OCTAMER SEQUENCES REVEALS FOUR DISTINCT PATTERNS OF SEQUENCE-DEPENDENT INTERMOLECULAR INTERACTIONS | X-ray diffraction | 1.9 | 8 | 1997-05-22 | ||||
| 134 | 369D|1|A+ 369D|1|B | DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3') | synthetic construct | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-ray diffraction | 1.9 | 16 | 1998-07-15 | |||
| 135 | 304D|1|A | DNA (5'-D(*IP*CP*AP*TP*AP*TP*IP*C)-3') | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE MONOCLINIC FORM | X-ray diffraction | 1.9 | 8 | 1997-09-25 | ||||
| 136 | 1ESG|1|C+ 1ESG|1|D | DNA (5'-D(*TP*GP*AP*AP*TP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*AP*TP*TP*CP*A)-3') | RESTRICTION ENDONUCLEASE BAMHI BOUND TO A NON-SPECIFIC DNA. | X-ray diffraction | 1.9 | 16 | 2000-05-31 | ||||
| 137 | 1AZQ|1|B+ 1AZQ|1|C | DNA (5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3') | HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX | X-ray diffraction | 1.94 | 16 | 1999-01-13 | ||||
| 138 | 2D95|1|A | DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*C)-3') | LOW-TEMPERATURE STUDY OF THE A-DNA FRAGMENT D(GGGCGCCC) | X-ray diffraction | 2 | 8 | 1994-01-15 | ||||
| 139 | 1UHX|1|A | 5'-D(*GP*(CBR)P*GP*AP*GP*AP*GP*C)-3' | Crystal structure of d(GCGAGAGC): the base-intercalated duplex | X-ray diffraction | 2 | 8 | 2004-02-03 | ||||
| 140 | 1DNS|1|A | DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3') | BASE ONLY BINDING OF SPERMINE IN THE DEEP GROOVE OF THE A-DNA OCTAMER D(GTGTACAC) | X-ray diffraction | 2 | 8 | 1990-04-15 | ||||
| 141 | 1VS2|1|A | 5'-D(*GP*CP*GP*TP*AP*CP*GP*C)-3' | Interactions of quinoxaline antibiotic and DNA: the molecular structure of a TRIOSTIN A-D(GCGTACGC) complex | X-ray diffraction | 2 | 8 | 2006-06-27 | ||||
| 142 | 1BNZ|1|B+ 1BNZ|1|C | 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3' | SSO7D HYPERTHERMOPHILE PROTEIN/DNA COMPLEX | X-ray diffraction | 2 | 16 | 1998-11-11 | ||||
| 143 | 2DNJ|1|B+ 2DNJ|1|C | 5'-D(*GP*CP*GP*AP*TP*C)-3', 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3' | DNASE I-INDUCED DNA CONFORMATION. 2 ANGSTROMS STRUCTURE OF A DNASE I-OCTAMER COMPLEX | X-ray diffraction | 2 | 14 | 1994-01-31 | ||||
| 144 | 1I7D|1|B | 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3' | NONCOVALENT COMPLEX OF E.COLI DNA TOPOISOMERASE III WITH AN 8-BASE SINGLE-STRANDED DNA OLIGONUCLEOTIDE | X-ray diffraction | 2.05 | 8 | 2001-06-29 | ||||
| 145 | 2FJV|1|B+ 2FJV|1|G | 5'-D(*CP*TP*TP*AP*AP*TP*TP*C)-3', 5'-D(P*GP*AP*AP*TP*TP*AP*AP*G)-3' | RT29 Bound to D(CTTAATTCGAATTAAG) in complex with MMLV RT Catalytic Fragment | X-ray diffraction | 2.05 | 16 | 2006-06-27 | ||||
| 146 | 346D|1|A | DNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*(5CM)P*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 2.1 | 8 | 1997-08-29 | ||||
| 147 | 189D|1|A | DNA (5'-D(*GP*GP*CP*CP*GP*GP*CP*C)-3') | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-ray diffraction | 2.1 | 8 | 1995-02-07 | ||||
| 148 | 342D|1|A | DNA (5'-D(*GP*(5CM)P*GP*(5CM)P*GP*(5CM)P*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 2.1 | 8 | 1997-07-21 | ||||
| 149 | 1D91|1|A+ 1D91|1|B | DNA (5'-D(*GP*GP*GP*GP*TP*CP*CP*C)-3') | G.T BASE PAIRS IN A DNA HELIX. THE CRYSTAL STRUCTURE OF D(G-G-G-G-T-C-C-C) | X-ray diffraction | 2.1 | 16 | 1993-07-15 | ||||
| 150 | 1D26|1|A | DNA (5'-D(*GP*CP*CP*CP*(G31)P*GP*GP*C)-3') | EFFECT OF A SINGLE 3'-METHYLENE PHOSPHONATE LINKAGE ON THE CONFORMATION OF AN A-DNA OCTAMER DOUBLE HELIX | X-ray diffraction | 2.12 | 8 | 1992-04-07 | ||||
| 151 | 1D93|1|A | DNA (5'-D(*CP*TP*CP*TP*AP*GP*AP*G)-3') | STRUCTURAL VARIATION IN D(CTCTAGAG). IMPLICATIONS FOR PROTEIN-DNA INTERACTIONS | X-ray diffraction | 2.15 | 8 | 1993-07-15 | ||||
| 152 | 305D|1|A | DNA (5'-D(*IP*CP*AP*TP*AP*TP*IP*C)-3') | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE TETRAGONAL FORM | X-ray diffraction | 2.17 | 8 | 1997-09-22 | ||||
| 153 | 197D|1|A+ 197D|1|B | DNA (5'-D(*GP*TP*AP*CP*GP*TP*AP*C)-3') | ORTHORHOMBIC CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GTACGTAC). COMPARISON WITH THE TETRAGONAL STRUCTURE | X-ray diffraction | 2.19 | 16 | 1995-02-07 | ||||
| 154 | 339D|1|A | DNA (5'-D(*GP*(5CM)P*GP*CP*GP*(5CM)P*GP*C)-3') | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-ray diffraction | 2.2 | 8 | 1997-07-21 | ||||
| 155 | 188D|1|A | DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*C)-3') | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-ray diffraction | 2.2 | 8 | 1995-02-07 | ||||
| 156 | 1CA5|1|B+ 1CA5|1|C | 5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3' | synthetic construct | INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA | X-ray diffraction | 2.2 | 16 | 2000-02-23 | |||
| 157 | 1A1V|1|B | DNA (5'-D(*UP*UP*UP*UP*UP*UP*UP*U)-3') | HEPATITIS C VIRUS NS3 HELICASE DOMAIN COMPLEXED WITH SINGLE STRANDED SDNA | X-ray diffraction | 2.2 | 7 | 1999-01-13 | ||||
| 158 | 1CA6|1|B+ 1CA6|1|C | 5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3' | synthetic construct | INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA | X-ray diffraction | 2.2 | 16 | 2000-02-23 | |||
| 159 | 1D7Z|1|A | 5'-H(*(6HG)P*(6HT)P*(6HG)P*(6HT)P*(6HA)P*(6HC)P*(6HA)P*(6HC))-3' | CRYSTAL STRUCTURE OF A HEXITOL NUCLEIC ACID (HNA) DUPLEX AT 2.2 A RESOLUTION | X-ray diffraction | 2.21 | 8 | 2002-06-28 | ||||
| 160 | 187D|1|A | DNA (5'-D(*CP*CP*CP*CP*GP*GP*GP*G)-3') | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-ray diffraction | 2.25 | 8 | 1995-02-07 | ||||
| 161 | 5ANA|1|A | DNA (5'-D(*GP*TP*AP*CP*GP*TP*AP*C)-3') | THE CRYSTAL STRUCTURE OF D(GTACGTAC) AT 2.25 ANGSTROMS RESOLUTION. ARE THE A-DNA'S ALWAYS UNWOUND APPROXIMATELY 10 DEGREES AT THE C-G STEPS | X-ray diffraction | 2.25 | 8 | 1990-04-15 | ||||
| 162 | 1D92|1|A+ 1D92|1|B | DNA (5'-D(*GP*GP*GP*GP*CP*TP*CP*C)-3') | REFINED CRYSTAL STRUCTURE OF AN OCTANUCLEOTIDE DUPLEX WITH G.T MISMATCHED BASE-PAIRS | X-ray diffraction | 2.25 | 16 | 1993-07-15 | ||||
| 163 | 1V3P|1|A | 5'-D(*GP*(C38)P*GP*AP*GP*AP*GP*C)-3' | Crystal structure of d(GCGAGAGC): the DNA octaplex structure with I-motif of G-quartet | X-ray diffraction | 2.3 | 0 | 2004-06-08 | ||||
| 164 | 1V3P|1|B | 5'-D(*GP*(C38)P*GP*AP*GP*AP*GP*C)-3' | Crystal structure of d(GCGAGAGC): the DNA octaplex structure with I-motif of G-quartet | X-ray diffraction | 2.3 | 0 | 2004-06-08 | ||||
| 165 | 1DNK|1|C+ 1DNK|1|B | DNA (5'-D(*GP*GP*TP*AP*TP*AP*C)-3'), DNA (5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3') | THE X-RAY STRUCTURE OF THE DNASE I-D(GGTATACC)2 COMPLEX AT 2.3 ANGSTROMS RESOLUTION | X-ray diffraction | 2.3 | 15 | 1994-01-31 | ||||
| 166 | 1QAJ|1|C+ 1QAJ|1|D | DNA (5'-D(*CP*AP*TP*GP*CP*AP*TP*G)-3') | CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN | X-ray diffraction | 2.3 | 16 | 2000-04-02 | ||||
| 167 | 1QAI|1|C+ 1QAI|1|D | DNA (5'-D(*CP*AP*TP*GP*CP*AP*TP*G)-3') | CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN | X-ray diffraction | 2.3 | 16 | 2000-03-20 | ||||
| 168 | 281D|1|A+ 281D|1|B | DNA (5'-D(*GP*GP*CP*AP*TP*GP*CP*C)-3') | CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GGCATGCC) | X-ray diffraction | 2.38 | 16 | 1996-09-16 | ||||
| 169 | 378D|1|A+ 378D|1|B | DNA (5'-D(*GP*TP*AP*TP*AP*TP*AP*C)-3') | STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA | X-ray diffraction | 2.4 | 16 | 1999-03-04 | ||||
| 170 | 28DN|1|A | DNA (5'-D(*GP*TP*AP*CP*GP*TP*AP*C)-3') | CRYSTAL STRUCTURE ANALYSIS OF AN A(DNA) OCTAMER D(GTACGTAC) | X-ray diffraction | 2.4 | 8 | 1991-07-15 | ||||
| 171 | 378D|1|C+ 378D|1|D | DNA (5'-D(*GP*TP*AP*TP*AP*TP*AP*C)-3') | STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA | X-ray diffraction | 2.4 | 16 | 1999-03-04 | ||||
| 172 | 250D|1|A+ 250D|1|B | DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3') | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-ray diffraction | 2.47 | 16 | 1996-04-19 | ||||
| 173 | 250D|1|C+ 250D|1|D | DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3') | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-ray diffraction | 2.47 | 16 | 1996-04-19 | ||||
| 174 | 250D|1|E+ 250D|1|F | DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3') | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-ray diffraction | 2.47 | 16 | 1996-04-19 | ||||
| 175 | 3ANA|1|A+ 3ANA|1|B | DNA (5'-D(*GP*GP*GP*AP*TP*CP*CP*C)-3') | THREE-DIMENSIONAL STRUCTURE OF D(GGGATCCC) IN THE CRYSTALLINE STATE | X-ray diffraction | 2.5 | 16 | 1989-01-09 | ||||
| 176 | 2ANA|1|A+ 2ANA|1|B | DNA (5'-D(*GP*GP*GP*GP*CP*CP*CP*C)-3') | THE CRYSTAL STRUCTURE OF D(G-G-G-G-C-C-C-C). A MODEL FOR POLY(DG).POLY(DC) | X-ray diffraction | 2.5 | 16 | 1985-08-05 | ||||
| 177 | 1D82|1|A | DNA (5'-D(*GP*TP*CP*TP*AP*GP*AP*C)-3') | CRYSTAL AND MOLECULAR STRUCTURE OF D(GTCTAGAC) | X-ray diffraction | 2.5 | 8 | 1992-10-15 | ||||
| 178 | 1QPS|1|N | 5'-D(*AP*AP*TP*TP*CP*GP*CP*GP*)-3' | THE CRYSTAL STRUCTURE OF A POST-REACTIVE COGNATE DNA-ECO RI COMPLEX AT 2.50 A IN THE PRESENCE OF MN2+ ION | X-ray diffraction | 2.5 | 0 | 1999-06-14 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs | NAKB NA annotation | NAKB protein annotation |
|---|---|---|---|---|---|---|---|---|
| 1 | 1A1V|1|B | HEPATITIS C VIRUS NS3 HELICASE DOMAIN COMPLEXED WITH SINGLE STRANDED SDNA | X-RAY DIFFRACTION | 2.2 | 7 | enzyme,helicase,hydrolase | ||
| 2 | 284D|1|A+ 284D|1|B | THE BI-LOOP, A NEW GENERAL FOUR-STRANDED DNA MOTIF | X-RAY DIFFRACTION | 1.1 | 16 | cyclic,feature,structure | ||
| 3 | 3KHC|1|C | Crystal Structure of Escherichia coli AlkB in complex with ssDNA containing a 1-methylguanine lesion | X-RAY DIFFRACTION | 2.2 | 0 | enzyme,oxidoreductase | ||
| 4 | 2O5C|1|D | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glucose pH 5.5 | X-RAY DIFFRACTION | 2.35 | 7 | enzyme,isomerase | ||
| 5 | 2O5C|1|C | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glucose pH 5.5 | X-RAY DIFFRACTION | 2.35 | 7 | enzyme,isomerase | ||
| 6 | 2O5E|1|C | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glucose pH 7.0 | X-RAY DIFFRACTION | 2.5 | 7 | enzyme,isomerase | ||
| 7 | 2O5E|1|D | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glucose pH 7.0 | X-RAY DIFFRACTION | 2.5 | 7 | enzyme,isomerase | ||
| 8 | 2O19|1|C | Structure of E. coli topoisomersae III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 5.5 | X-RAY DIFFRACTION | 2.45 | 7 | enzyme,isomerase | ||
| 9 | 2O54|1|C | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 7.0 | X-RAY DIFFRACTION | 2.5 | 7 | enzyme,isomerase | ||
| 10 | 2H0N|1|B | Structure of the fully modified left-handed cyclohexene nucleic acid sequence GTGTACAC | X-RAY DIFFRACTION | 1.53 | 8 | double helix,structure | ||
| 11 | 2H0N|1|A | Structure of the fully modified left-handed cyclohexene nucleic acid sequence GTGTACAC | X-RAY DIFFRACTION | 1.53 | 8 | double helix,structure | ||
| 12 | 1V15|1|E+ 1V15|1|F | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-RAY DIFFRACTION | 2.4 | 15 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 13 | 1V15|1|G+ 1V15|1|H | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-RAY DIFFRACTION | 2.4 | 14 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 14 | 1V15|1|I+ 1V15|1|J | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-RAY DIFFRACTION | 2.4 | 15 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 15 | 1V15|1|K+ 1V15|1|L | CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A) | X-RAY DIFFRACTION | 2.4 | 14 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 16 | 1I7D|1|B | NONCOVALENT COMPLEX OF E.COLI DNA TOPOISOMERASE III WITH AN 8-BASE SINGLE-STRANDED DNA OLIGONUCLEOTIDE | X-RAY DIFFRACTION | 2.05 | 8 | enzyme,isomerase | ||
| 17 | 2O19|1|D | Structure of E. coli topoisomersae III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 5.5 | X-RAY DIFFRACTION | 2.45 | 8 | enzyme,isomerase | ||
| 18 | 2O54|1|D | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 7.0 | X-RAY DIFFRACTION | 2.5 | 8 | enzyme,isomerase | ||
| 19 | 2O59|1|D | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol pH 8.0 | X-RAY DIFFRACTION | 2.5 | 8 | enzyme,isomerase | ||
| 20 | 2O59|1|C | Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol pH 8.0 | X-RAY DIFFRACTION | 2.5 | 7 | enzyme,isomerase | ||
| 21 | 1D7Z|1|A | CRYSTAL STRUCTURE OF A HEXITOL NUCLEIC ACID (HNA) DUPLEX AT 2.2 A RESOLUTION | X-RAY DIFFRACTION | 2.21 | 8 | double helix,structure | ||
| 22 | 368D|1|A+ 368D|1|B | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-RAY DIFFRACTION | 1.6 | 16 | double helix,structure | ||
| 23 | 197D|1|A+ 197D|1|B | ORTHORHOMBIC CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GTACGTAC). COMPARISON WITH THE TETRAGONAL STRUCTURE | X-RAY DIFFRACTION | 2.19 | 16 | double helix,structure | ||
| 24 | 1WTW|1|B+ 1WTW|1|C | Hyperthermophile chromosomal protein SAC7D single mutant V26A in complex with DNA GCGATCGC | X-RAY DIFFRACTION | 2.2 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 25 | 1CA6|1|B+ 1CA6|1|C | INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA | X-RAY DIFFRACTION | 2.2 | 16 | double helix,feature,mispair,structure | chromatin,nucleosome,structural | |
| 26 | 1C8C|1|B+ 1C8C|1|C | CRYSTAL STRUCTURES OF THE CHROMOSOMAL PROTEINS SSO7D/SAC7D BOUND TO DNA CONTAINING T-G MISMATCHED BASE PAIRS | X-RAY DIFFRACTION | 1.45 | 16 | double helix,feature,mispair,structure | chromatin,nucleosome,structural | |
| 27 | 1CA5|1|B+ 1CA5|1|C | INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA | X-RAY DIFFRACTION | 2.2 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 28 | 1WTR|1|B+ 1WTR|1|C | Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GCGATCGC | X-RAY DIFFRACTION | 1.8 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 29 | 1AZP|1|B+ 1AZP|1|C | HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX | X-RAY DIFFRACTION | 1.6 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 30 | 1WTP|1|C+ 1WTP|1|D | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GCGA(UBr)CGC | X-RAY DIFFRACTION | 1.9 | 16 | chromatin,nucleosome,structural | ||
| 31 | 1BF4|1|B+ 1BF4|1|C | CHROMOSOMAL DNA-BINDING PROTEIN SSO7D/D(GCGAACGC) COMPLEX | X-RAY DIFFRACTION | 1.6 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 32 | 1WTO|1|B+ 1WTO|1|C | Hyperthermophile chromosomal protein SAC7D double mutant V26F/M29F in complex with DNA GCGATCGC | X-RAY DIFFRACTION | 1.5 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 33 | 1WTP|1|E+ 1WTP|1|F | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GCGA(UBr)CGC | X-RAY DIFFRACTION | 1.9 | 16 | chromatin,nucleosome,structural | ||
| 34 | 3LWI|1|E+ 3LWI|1|F | Crystal structure of Cren7-dsDNA complex | X-RAY DIFFRACTION | 2.3 | 16 | B-form double helix,double helix,structure | chromatin,structural | |
| 35 | 3LWI|1|C+ 3LWI|1|D | Crystal structure of Cren7-dsDNA complex | X-RAY DIFFRACTION | 2.3 | 16 | B-form double helix,double helix,structure | chromatin,structural | |
| 36 | 3LWH|1|B+ 3LWH|1|C | Crystal structure of Cren7-dsDNA complex | X-RAY DIFFRACTION | 1.9 | 16 | B-form double helix,double helix,structure | chromatin,structural | |
| 37 | 3KXT|1|B+ 3KXT|1|C | Crystal structure of Sulfolobus Cren7-dsDNA complex | X-RAY DIFFRACTION | 1.602 | 16 | B-form double helix,double helix,structure | chromatin,structural | |
| 38 | 1WTV|1|B+ 1WTV|1|C | Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC | X-RAY DIFFRACTION | 1.6 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 39 | 1WTQ|1|B+ 1WTQ|1|C | Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GTAATTAC | X-RAY DIFFRACTION | 1.7 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 40 | 1WTX|1|B+ 1WTX|1|C | Hyperthermophile chromosomal protein SAC7D single mutant V26A in complex with DNA GTAATTAC | X-RAY DIFFRACTION | 2.2 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 41 | 1AZQ|1|B+ 1AZQ|1|C | HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX | X-RAY DIFFRACTION | 1.94 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 42 | 1BNZ|1|B+ 1BNZ|1|C | SSO7D HYPERTHERMOPHILE PROTEIN/DNA COMPLEX | X-RAY DIFFRACTION | 2 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 43 | 1XYI|1|B+ 1XYI|1|C | Hyperthermophile chromosomal protein Sac7d double mutant Val26Ala/Met29Ala in complex with DNA GCGATCGC | X-RAY DIFFRACTION | 1.45 | 16 | B-form double helix,double helix,structure | chromatin,nucleosome,structural | |
| 44 | 1QPS|1|N | THE CRYSTAL STRUCTURE OF A POST-REACTIVE COGNATE DNA-ECO RI COMPLEX AT 2.50 A IN THE PRESENCE OF MN2+ ION | X-RAY DIFFRACTION | 2.5 | 0 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 45 | 3IGM|1|W+ 3IGM|1|X | A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA | X-RAY DIFFRACTION | 2.2 | 16 | regulatory,transcription | ||
| 46 | 1L2B|1|C | MutM (Fpg) DNA End-Product Structure | X-RAY DIFFRACTION | 2.4 | 0 | enzyme,hydrolase | ||
| 47 | 2DNJ|1|B+ 2DNJ|1|C | DNASE I-INDUCED DNA CONFORMATION. 2 ANGSTROMS STRUCTURE OF A DNASE I-OCTAMER COMPLEX | X-RAY DIFFRACTION | 2 | 14 | double helix,structure | enzyme,hydrolase,nuclease | |
| 48 | 1OUP|1|F+ 1OUP|1|E | Crystal structure of the periplasmic endonuclease Vvn complexed with octamer double stranded DNA | X-RAY DIFFRACTION | 2.3 | 0 | double helix,structure | enzyme,hydrolase,nuclease | |
| 49 | 1D90|1|A+ 1D90|1|B | REFINED CRYSTAL STRUCTURE OF AN OCTANUCLEOTIDE DUPLEX WITH I.T MISMATCHED BASE PAIRS | X-RAY DIFFRACTION | 1.7 | 16 | double helix,structure | ||
| 50 | 281D|1|A+ 281D|1|B | CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GGCATGCC) | X-RAY DIFFRACTION | 2.38 | 16 | A-form double helix,double helix,structure | ||
| 51 | 1D92|1|A+ 1D92|1|B | REFINED CRYSTAL STRUCTURE OF AN OCTANUCLEOTIDE DUPLEX WITH G.T MISMATCHED BASE-PAIRS | X-RAY DIFFRACTION | 2.25 | 16 | double helix,feature,mispair,structure | ||
| 52 | 2ANA|1|A+ 2ANA|1|B | THE CRYSTAL STRUCTURE OF D(G-G-G-G-C-C-C-C). A MODEL FOR POLY(DG).POLY(DC) | X-RAY DIFFRACTION | 2.5 | 16 | A-form double helix,double helix,structure | ||
| 53 | 3ANA|1|A+ 3ANA|1|B | THREE-DIMENSIONAL STRUCTURE OF D(GGGATCCC) IN THE CRYSTALLINE STATE | X-RAY DIFFRACTION | 2.5 | 16 | A-form double helix,double helix,structure | ||
| 54 | 371D|1|A+ 371D|1|B | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-RAY DIFFRACTION | 1.9 | 16 | A-form double helix,double helix,structure | ||
| 55 | 369D|1|A+ 369D|1|B | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-RAY DIFFRACTION | 1.9 | 16 | A-form double helix,double helix,structure | ||
| 56 | 370D|1|A+ 370D|1|B | STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG) | X-RAY DIFFRACTION | 1.67 | 16 | A-form double helix,double helix,structure | ||
| 57 | 3HGD|1|A+ 3HGD|1|B | Crystal Structure of 2-Se-Thymidine Derivatized DNA | X-RAY DIFFRACTION | 1.57 | 16 | A-form double helix,double helix,structure | ||
| 58 | 1D78|1|A | HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION | X-RAY DIFFRACTION | 1.4 | 8 | A-form double helix,double helix,structure | ||
| 59 | 1D79|1|A | HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION | X-RAY DIFFRACTION | 1.45 | 8 | A-form double helix,double helix,structure | ||
| 60 | 2PLB|1|A+ 2PLB|1|B | D(GTATACC) under hydrostatic pressure of 1.39 GPa | X-RAY DIFFRACTION | 1.6 | 16 | A-form double helix,double helix,structure | ||
| 61 | 2PL8|1|A+ 2PL8|1|B | D(GTATACC) under hydrostatic pressure of 1.04 GPa | X-RAY DIFFRACTION | 1.65 | 16 | A-form double helix,double helix,structure | ||
| 62 | 2PL4|1|A+ 2PL4|1|B | D-(GGTATACC) under 0.55 GPa hydrostatic pressure | X-RAY DIFFRACTION | 1.65 | 16 | A-form double helix,double helix,structure | ||
| 63 | 2PLO|1|A+ 2PLO|1|B | D-(GTATACC) low temperature (100K) | X-RAY DIFFRACTION | 1.4 | 16 | A-form double helix,double helix,structure | ||
| 64 | 1VJ4|1|A+ 1VJ4|1|B | SEQUENCE-DEPENDENT CONFORMATION OF AN A-DNA DOUBLE HELIX: THE CRYSTAL STRUCTURE OF THE OCTAMER D(G-G-T-A-T-A-C-C) | X-RAY DIFFRACTION | 1.8 | 16 | A-form double helix,double helix,structure | ||
| 65 | 2PKV|1|A+ 2PKV|1|B | D-(GGTATACC) ambient pressure | X-RAY DIFFRACTION | 1.6 | 16 | A-form double helix,double helix,structure | ||
| 66 | 115D|1|A+ 115D|1|B | ORDERED WATER STRUCTURE IN AN A-DNA OCTAMER AT 1.7 ANGSTROMS RESOLUTION | X-RAY DIFFRACTION | 1.7 | 16 | A-form double helix,double helix,structure | ||
| 67 | 1D91|1|A+ 1D91|1|B | G.T BASE PAIRS IN A DNA HELIX. THE CRYSTAL STRUCTURE OF D(G-G-G-G-T-C-C-C) | X-RAY DIFFRACTION | 2.1 | 16 | A-form double helix,double helix,feature,mispair,structure | ||
| 68 | 2A7E|1|S | On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- The Optimal Data Collection Wavelength | X-RAY DIFFRACTION | 1.66 | 8 | double helix,structure | ||
| 69 | 317D|1|A | STRUCTURE OF D(CCTAGGG): COMPARISON WITH NINE ISOMORPHOUS OCTAMER SEQUENCES REVEALS FOUR DISTINCT PATTERNS OF SEQUENCE-DEPENDENT INTERMOLECULAR INTERACTIONS | X-RAY DIFFRACTION | 1.9 | 8 | A-form double helix,double helix,structure | ||
| 70 | 3IFI|1|A | 2'-SeMe-dG modified octamer DNA | X-RAY DIFFRACTION | 1.2 | 8 | double helix,structure | ||
| 71 | 2H05|1|A | Br Derivitation of A-DNA Octamer GTG(Ubr)ACAC | X-RAY DIFFRACTION | 1.8 | 8 | A-form double helix,double helix,structure | ||
| 72 | 1DNS|1|A | BASE ONLY BINDING OF SPERMINE IN THE DEEP GROOVE OF THE A-DNA OCTAMER D(GTGTACAC) | X-RAY DIFFRACTION | 2 | 8 | A-form double helix,double helix,structure | ||
| 73 | 295D|1|A | CRYSTAL AND SOLUTION STRUCTURES OF THE OLIGONUCLEOTIDE D(ATGCGCAT)2: A COMBINED X-RAY AND NMR STUDY | X-RAY DIFFRACTION | 1.5 | 8 | A-form double helix,double helix,structure | ||
| 74 | 189D|1|A | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-RAY DIFFRACTION | 2.1 | 8 | A-form double helix,double helix,structure | ||
| 75 | 1D93|1|A | STRUCTURAL VARIATION IN D(CTCTAGAG). IMPLICATIONS FOR PROTEIN-DNA INTERACTIONS | X-RAY DIFFRACTION | 2.15 | 8 | A-form double helix,double helix,structure | ||
| 76 | 243D|1|A | STRUCTURE OF THE DNA OCTANUCLEOTIDE D(ACGTACGT)2 | X-RAY DIFFRACTION | 1.9 | 8 | A-form double helix,double helix,structure | ||
| 77 | 344D|1|A | DETERMINATION BY MAD-DM OF THE STRUCTURE OF THE DNA DUPLEX D(ACGTACG(5-BRU))2 AT 1.46A AND 100K | X-RAY DIFFRACTION | 1.46 | 8 | A-form double helix,double helix,structure | ||
| 78 | 187D|1|A | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-RAY DIFFRACTION | 2.25 | 8 | A-form double helix,double helix,structure | ||
| 79 | 1R41|1|A | Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers | X-RAY DIFFRACTION | 1.9 | 8 | A-form double helix,double helix,structure | ||
| 80 | 338D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 1.85 | 8 | A-form double helix,double helix,structure | ||
| 81 | 345D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 1.85 | 8 | A-form double helix,double helix,structure | ||
| 82 | 340D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 1.6 | 8 | A-form double helix,double helix,structure | ||
| 83 | 1R3Z|1|A | Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers | X-RAY DIFFRACTION | 1.7 | 8 | A-form double helix,double helix,structure | ||
| 84 | 341D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 1.75 | 8 | A-form double helix,double helix,structure | ||
| 85 | 28DN|1|A | CRYSTAL STRUCTURE ANALYSIS OF AN A(DNA) OCTAMER D(GTACGTAC) | X-RAY DIFFRACTION | 2.4 | 8 | A-form double helix,double helix,structure | ||
| 86 | 5ANA|1|A | THE CRYSTAL STRUCTURE OF D(GTACGTAC) AT 2.25 ANGSTROMS RESOLUTION. ARE THE A-DNA'S ALWAYS UNWOUND APPROXIMATELY 10 DEGREES AT THE C-G STEPS | X-RAY DIFFRACTION | 2.25 | 8 | A-form double helix,double helix,structure | ||
| 87 | 1D82|1|A | CRYSTAL AND MOLECULAR STRUCTURE OF D(GTCTAGAC) | X-RAY DIFFRACTION | 2.5 | 8 | A-form double helix,double helix,structure | ||
| 88 | 118D|1|A | CRYSTAL AND MOLECULAR STRUCTURE OF D(GTGCGCAC): INVESTIGATION OF THE EFFECTS OF BASE SEQUENCE ON THE CONFORMATION OF OCTAMER DUPLEXES | X-RAY DIFFRACTION | 1.64 | 8 | A-form double helix,double helix,structure | ||
| 89 | 188D|1|A | HYDRATION PATTERNS AND INTERMOLECULAR INTERACTIONS IN A-DNA CRYSTAL STRUCTURES. IMPLICATIONS FOR DNA RECOGNITION | X-RAY DIFFRACTION | 2.2 | 8 | A-form double helix,double helix,structure | ||
| 90 | 2D95|1|A | LOW-TEMPERATURE STUDY OF THE A-DNA FRAGMENT D(GGGCGCCC) | X-RAY DIFFRACTION | 2 | 8 | A-form double helix,double helix,structure | ||
| 91 | 1D26|1|A | EFFECT OF A SINGLE 3'-METHYLENE PHOSPHONATE LINKAGE ON THE CONFORMATION OF AN A-DNA OCTAMER DOUBLE HELIX | X-RAY DIFFRACTION | 2.12 | 8 | A-form double helix,double helix,structure | ||
| 92 | 9DNA|1|A | CRYSTAL STRUCTURE ANALYSIS OF AN A-DNA FRAGMENT AT 1.8 ANGSTROMS RESOLUTION. D(GCCCGGGC) | X-RAY DIFFRACTION | 1.8 | 8 | A-form double helix,double helix,structure | ||
| 93 | 346D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 2.1 | 8 | A-form double helix,double helix,structure | ||
| 94 | 342D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 2.1 | 8 | A-form double helix,double helix,structure | ||
| 95 | 339D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 2.2 | 8 | A-form double helix,double helix,structure | ||
| 96 | 337D|1|A | STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA | X-RAY DIFFRACTION | 1.85 | 8 | A-form double helix,double helix,structure | ||
| 97 | 2D94|1|A | THE CONFORMATION OF THE DNA DOUBLE HELIX IN THE CRYSTAL IS DEPENDENT ON ITS ENVIRONMENT | X-RAY DIFFRACTION | 1.7 | 8 | A-form double helix,double helix,structure | ||
| 98 | 3IJK|1|A | 5-OMe modified DNA 8mer | X-RAY DIFFRACTION | 1.3 | 8 | A-form double helix,double helix,structure | ||
| 99 | 3LTR|1|A | 5-OMe-dU containing DNA 8mer | X-RAY DIFFRACTION | 1.3 | 8 | A-form double helix,double helix,structure | ||
| 100 | 3LTU|1|A | 5-SeMe-dU containing DNA 8mer | X-RAY DIFFRACTION | 1.4 | 8 | A-form double helix,double helix,structure | ||
| 101 | 3HG8|1|A | Crystal Structure of 5-SMe Derivatized DNA | X-RAY DIFFRACTION | 1.38 | 8 | A-form double helix,double helix,structure | ||
| 102 | 3IKI|1|A | 5-SMe-dU containing DNA octamer | X-RAY DIFFRACTION | 1.38 | 8 | A-form double helix,double helix,structure | ||
| 103 | 3K18|1|A | Tellurium modified DNA-8mer | X-RAY DIFFRACTION | 1.5 | 8 | A-form double helix,double helix,structure | ||
| 104 | 3IJN|1|A | 5-SeMe-Cytidine modified DNA 8mer | X-RAY DIFFRACTION | 1.8 | 8 | A-form double helix,double helix,structure | ||
| 105 | 3FA1|1|A | Crystal Structure of Tellurium Derivatized DNA | X-RAY DIFFRACTION | 1.5 | 8 | A-form double helix,double helix,structure | ||
| 106 | 2NSK|1|A | Doubled Modified Selenium DNA | X-RAY DIFFRACTION | 1.5 | 8 | A-form double helix,double helix,structure | ||
| 107 | 3BM0|1|A | Structure of DNA Octamer G(dUSe)G(5-SedU)ACAC | X-RAY DIFFRACTION | 1.8 | 8 | A-form double helix,double helix,structure | ||
| 108 | 2GPX|1|A | 2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC | X-RAY DIFFRACTION | 1.6 | 8 | A-form double helix,double helix,structure | ||
| 109 | 1Z7I|1|A | 2'-Me-Se Derivitation of A-DNA Octamer G(UMSe)GTACAC | X-RAY DIFFRACTION | 1.28 | 8 | A-form double helix,double helix,structure | ||
| 110 | 2HC7|1|A | 2'-selenium-T A-DNA [G(TSe)GTACAC] | X-RAY DIFFRACTION | 1.4 | 8 | A-form double helix,double helix,structure | ||
| 111 | 2DLJ|1|A | 2'-Me-Se and Br Derivitation of A-DNA Octamer G(UMS)G(BRU)ACAC | X-RAY DIFFRACTION | 1.5 | 8 | A-form double helix,double helix,structure | ||
| 112 | 3KQ8|1|A | 5-Te-uridine derivatized DNA-8mer | X-RAY DIFFRACTION | 1.6 | 8 | A-form double helix,double helix,structure | ||
| 113 | 1OUP|1|C+ 1OUP|1|D | Crystal structure of the periplasmic endonuclease Vvn complexed with octamer double stranded DNA | X-RAY DIFFRACTION | 2.3 | 16 | double helix,structure | enzyme,hydrolase,nuclease | |
| 114 | 1PT3|1|C+ 1PT3|1|D | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-RAY DIFFRACTION | 2.5 | 16 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 115 | 1PT3|1|E+ 1PT3|1|F | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-RAY DIFFRACTION | 2.5 | 16 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 116 | 1PT3|1|G+ 1PT3|1|H | Crystal structures of nuclease-ColE7 complexed with octamer DNA | X-RAY DIFFRACTION | 2.5 | 16 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 117 | 3FSI|1|B+ 3FSI|1|G | Crystal structure of a trypanocidal 4,4'-Bis(imidazolinylamino)diphenylamine bound to DNA | X-RAY DIFFRACTION | 1.75 | 16 | B-form double helix,double helix,structure | enzyme,polymerase,transferase | |
| 118 | 1DNK|1|C+ 1DNK|1|B | THE X-RAY STRUCTURE OF THE DNASE I-D(GGTATACC)2 COMPLEX AT 2.3 ANGSTROMS RESOLUTION | X-RAY DIFFRACTION | 2.3 | 15 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 119 | 1ESG|1|C+ 1ESG|1|D | RESTRICTION ENDONUCLEASE BAMHI BOUND TO A NON-SPECIFIC DNA. | X-RAY DIFFRACTION | 1.9 | 16 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 120 | 2FJV|1|B+ 2FJV|1|G | RT29 Bound to D(CTTAATTCGAATTAAG) in complex with MMLV RT Catalytic Fragment | X-RAY DIFFRACTION | 2.05 | 16 | B-form double helix,double helix,structure | enzyme,polymerase,transferase | |
| 121 | 1ZTW|1|B+ 1ZTW|1|G | d(CTTAATTCGAATTAAG) complexed with Moloney Murine Leukemia Virus Reverse Transcriptase catalytic fragment | X-RAY DIFFRACTION | 1.8 | 16 | B-form double helix,double helix,structure | enzyme,polymerase,transferase | |
| 122 | 1QAI|1|C+ 1QAI|1|D | CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN | X-RAY DIFFRACTION | 2.3 | 16 | B-form double helix,double helix,structure | enzyme,polymerase,transferase | |
| 123 | 2R2R|1|B+ 2R2R|1|G | d(ATTAGTTATAACTAAT) complexed with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 2.1 | 16 | B-form double helix,double helix,structure | enzyme,polymerase,transferase | |
| 124 | 2FJX|1|B+ 2FJX|1|G | RT29 bound to D(CTTGAATGCATTCAAG) in complex with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 1.8 | 16 | B-form double helix,double helix,structure | enzyme,polymerase,transferase | |
| 125 | 2FJW|1|B+ 2FJW|1|G | d(CTTGAATGCATTCAAG) in complex with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 1.95 | 16 | B-form double helix,double helix,structure | enzyme,polymerase,transferase | |
| 126 | 2R2T|1|B+ 2R2T|1|G | d(ATTTAGTTAACTAAAT) complexed with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 2 | 16 | B-form double helix,double helix,structure | enzyme,polymerase,transferase | |
| 127 | 1ZTT|1|B+ 1ZTT|1|G | Netropsin bound to d(CTTAATTCGAATTAAG) in complex with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 1.85 | 16 | B-form double helix,double helix,structure | enzyme,polymerase,transferase | |
| 128 | 378D|1|C+ 378D|1|D | STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA | X-RAY DIFFRACTION | 2.4 | 16 | B-form double helix,double helix,structure | ||
| 129 | 378D|1|A+ 378D|1|B | STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA | X-RAY DIFFRACTION | 2.4 | 16 | B-form double helix,double helix,structure | ||
| 130 | 305D|1|A | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE TETRAGONAL FORM | X-RAY DIFFRACTION | 2.17 | 8 | double helix,structure | ||
| 131 | 159D|1|A | SIDE BY SIDE BINDING OF TWO DISTAMYCIN A DRUGS IN THE MINOR GROOVE OF AN ALTERNATING B-DNA DUPLEX | X-RAY DIFFRACTION | 1.8 | 8 | B-form double helix,double helix,structure | ||
| 132 | 306D|1|A | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICITACIC) | X-RAY DIFFRACTION | 1.6 | 8 | B-form double helix,double helix,structure | ||
| 133 | 304D|1|A | SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE MONOCLINIC FORM | X-RAY DIFFRACTION | 1.9 | 8 | B-form double helix,double helix,structure | ||
| 134 | 1JUX|1|A | 1.6A Resolution Crystal Structures of the DNA Octamers d(IUATATAC) and d(ITITACAC):Binding of Two Distamycin Drugs Side-by-Side | X-RAY DIFFRACTION | 1.6 | 8 | B-form double helix,double helix,structure | ||
| 135 | 250D|1|C+ 250D|1|D | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-RAY DIFFRACTION | 2.47 | 16 | B-form double helix,double helix,structure | ||
| 136 | 250D|1|A+ 250D|1|B | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-RAY DIFFRACTION | 2.47 | 16 | B-form double helix,double helix,structure | ||
| 137 | 250D|1|E+ 250D|1|F | STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXES | X-RAY DIFFRACTION | 2.47 | 16 | B-form double helix,double helix,structure | ||
| 138 | 1QAJ|1|C+ 1QAJ|1|D | CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN | X-RAY DIFFRACTION | 2.3 | 16 | B-form double helix,double helix,structure | enzyme,polymerase,transferase | |
| 139 | 2R2U|1|G+ 2R2U|1|B | Co(III)bleomycinB2 bithiazole/C-terminal tail domain bound to d(ATTTAGTTAACTAAAT) complexed with MMLV RT catalytic fragment | X-RAY DIFFRACTION | 2.3 | 15 | enzyme,polymerase,transferase | ||
| 140 | 3IGM|1|C+ 3IGM|1|D | A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA | X-RAY DIFFRACTION | 2.2 | 15 | regulatory,transcription | ||
| 141 | 454D|1|G+ 454D|1|H | INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3' | X-RAY DIFFRACTION | 1.2 | 16 | B-form double helix,double helix,structure | ||
| 142 | 454D|1|E+ 454D|1|F | INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3' | X-RAY DIFFRACTION | 1.2 | 16 | B-form double helix,double helix,structure | ||
| 143 | 454D|1|A+ 454D|1|B | INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3' | X-RAY DIFFRACTION | 1.2 | 16 | B-form double helix,double helix,structure | ||
| 144 | 454D|1|C+ 454D|1|D | INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3' | X-RAY DIFFRACTION | 1.2 | 16 | B-form double helix,double helix,structure | ||
| 145 | 454D|1|I+ 454D|1|J | INTERCALATION AND MAJOR GROOVE RECOGNITION IN THE 1.2 A RESOLUTION CRYSTAL STRUCTURE OF RH[ME2TRIEN]PHI BOUND TO 5'-G(5IU)TGCAAC-3' | X-RAY DIFFRACTION | 1.2 | 16 | B-form double helix,double helix,structure | ||
| 146 | 3A4K|1|F+ 3A4K|1|J+ 3A4K|1|E+ 3A4K|1|I | Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolution | X-RAY DIFFRACTION | 2.17 | 24 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 147 | 3A4K|1|H+ 3A4K|1|L+ 3A4K|1|G+ 3A4K|1|K | Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolution | X-RAY DIFFRACTION | 2.17 | 24 | B-form double helix,double helix,structure | enzyme,hydrolase,nuclease | |
| 148 | 1QSL|1|B | KLENOW FRAGMENT COMPLEXED WITH SINGLE-STRANDED SUBSTRATE AND EUROPIUM (III) ION | X-RAY DIFFRACTION | 2.2 | 4 | enzyme,polymerase,transferase | ||
| 149 | 481D|1|A | CRYSTAL STRUCTURE OF A HEXITOL NUCLEIC ACID (HNA) DUPLEX AT 1.6A RESOLUTION | X-RAY DIFFRACTION | 1.6 | 8 | A-form double helix,double helix,structure | ||
| 150 | 1VAQ|1|A+ 1VAQ|1|B | Crystal structure of the Mg2+-(chromomycin A3)2-d(TTGGCCAA)2 complex reveals GGCC binding specificity of the drug dimer chelated by metal ion | X-RAY DIFFRACTION | 2 | 16 | double helix,structure | ||
| 151 | 1VAQ|1|C+ 1VAQ|1|D | Crystal structure of the Mg2+-(chromomycin A3)2-d(TTGGCCAA)2 complex reveals GGCC binding specificity of the drug dimer chelated by metal ion | X-RAY DIFFRACTION | 2 | 16 | double helix,structure | ||
| 152 | 3C2J|1|A+ 3C2J|1|B | Crystal structure analysis of trioxacarcin A covalently bound to d(AACCGGTT) | X-RAY DIFFRACTION | 1.78 | 16 | B-form double helix,double helix,structure | ||
| 153 | 2W42|1|R | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. | X-RAY DIFFRACTION | 1.9 | 0 | B-form double helix,double helix,structure | gene silencing,regulatory | |
| 154 | 2W42|1|P+ 2W42|1|Q | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. | X-RAY DIFFRACTION | 1.9 | 12 | B-form double helix,double helix,structure | gene silencing,regulatory | |
| 155 | 3GPL|1|X | Crystal structure of the ternary complex of RecD2 with DNA and ADPNP | X-RAY DIFFRACTION | 2.5 | 7 | enzyme,helicase,hydrolase | ||
| 156 | 3GPL|1|Y | Crystal structure of the ternary complex of RecD2 with DNA and ADPNP | X-RAY DIFFRACTION | 2.5 | 7 | enzyme,helicase,hydrolase | ||
| 157 | 2W42|1|S | THE STRUCTURE OF A PIWI PROTEIN FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH A 16NT DNA DUPLEX. | X-RAY DIFFRACTION | 1.9 | 0 | B-form double helix,double helix,structure | gene silencing,regulatory | |
| 158 | 2ADW|1|A+ 2ADW|1|C | Crystal structure of Echinomycin-(ACGTACGT)2 solved by SAD | X-RAY DIFFRACTION | 1.6 | 16 | double helix,structure | ||
| 159 | 2ADW|1|E+ 2ADW|1|G | Crystal structure of Echinomycin-(ACGTACGT)2 solved by SAD | X-RAY DIFFRACTION | 1.6 | 16 | double helix,structure | ||
| 160 | 1XVN|1|A | echinomycin (ACGTACGT)2 complex | X-RAY DIFFRACTION | 1.5 | 8 | double helix,structure | ||
| 161 | 3GO3|1|A+ 3GO3|1|B | Interactions of an echinomycin-DNA complex with manganese(II) ions | X-RAY DIFFRACTION | 1.1 | 16 | double helix,structure | ||
| 162 | 1VS2|1|A | Interactions of quinoxaline antibiotic and DNA: the molecular structure of a TRIOSTIN A-D(GCGTACGC) complex | X-RAY DIFFRACTION | 2 | 8 | double helix,structure | ||
| 163 | 1PFE|1|A | Echinomycin-(gcgtacgc)2 complex | X-RAY DIFFRACTION | 1.1 | 8 | double helix,structure | ||
| 164 | 1XVK|1|A | X-ray structure of an Echinomycin-(GCGTACGC)2 complex | X-RAY DIFFRACTION | 1.26 | 8 | double helix,structure | ||
| 165 | 1V3O|1|A | Crystal structure of d(GCGAGAGC): the DNA quadruplex structure split from the octaplex | X-RAY DIFFRACTION | 1.7 | 0 | I-motif,parallel helix,structure | ||
| 166 | 1V3N|1|A | Crystal structure of d(GCGAGAGC): the DNA quadruplex structure split from the octaplex | X-RAY DIFFRACTION | 1.8 | 0 | I-motif,parallel helix,structure | ||
| 167 | 1UHX|1|A | Crystal structure of d(GCGAGAGC): the base-intercalated duplex | X-RAY DIFFRACTION | 2 | 8 | NAKB_NA_annotation | NAKB_protein_annotation | |
| 168 | 1UE3|1|A | Crystal structure of d(GCGAAAGC) containing hexaamminecobalt | X-RAY DIFFRACTION | 2.15 | 8 | NAKB_NA_annotation | NAKB_protein_annotation | |
| 169 | 2DZ7|1|A | DNA Octaplex Formation with an I-Motif of A-Quartets: The Revised Crystal Structure of d(GCGAAAGC) | X-RAY DIFFRACTION | 1.6 | 8 | I-motif,parallel helix,quadruplex,structure | ||
| 170 | 1UE4|1|A | Crystal structure of d(GCGAAAGC) | X-RAY DIFFRACTION | 1.65 | 8 | NAKB_NA_annotation | NAKB_protein_annotation | |
| 171 | 1UHY|1|A | Crystal structure of d(GCGATAGC): the base-intercalated duplex | X-RAY DIFFRACTION | 1.7 | 8 | NAKB_NA_annotation | NAKB_protein_annotation | |
| 172 | 1V3N|1|B | Crystal structure of d(GCGAGAGC): the DNA quadruplex structure split from the octaplex | X-RAY DIFFRACTION | 1.8 | 0 | I-motif,parallel helix,structure | ||
| 173 | 1V3O|1|B | Crystal structure of d(GCGAGAGC): the DNA quadruplex structure split from the octaplex | X-RAY DIFFRACTION | 1.7 | 0 | I-motif,parallel helix,structure | ||
| 174 | 1V3P|1|A | Crystal structure of d(GCGAGAGC): the DNA octaplex structure with I-motif of G-quartet | X-RAY DIFFRACTION | 2.3 | 0 | I-motif,parallel helix,quadruplex,structure | ||
| 175 | 1V3P|1|B | Crystal structure of d(GCGAGAGC): the DNA octaplex structure with I-motif of G-quartet | X-RAY DIFFRACTION | 2.3 | 0 | I-motif,parallel helix,quadruplex,structure | ||
| 176 | 1JMC|1|B | SINGLE STRANDED DNA-BINDING DOMAIN OF HUMAN REPLICATION PROTEIN A BOUND TO SINGLE STRANDED DNA, RPA70 SUBUNIT, RESIDUES 183-420 | X-RAY DIFFRACTION | 2.4 | 8 | regulatory,transcription | ||
| 177 | 2H9S|1|A | Crystal Structure of Homo-DNA and Nature's Choice of Pentose over Hexose in the Genetic System | X-RAY DIFFRACTION | 1.75 | 0 | NAKB_NA_annotation | NAKB_protein_annotation | |
| 178 | 2H9S|1|B | Crystal Structure of Homo-DNA and Nature's Choice of Pentose over Hexose in the Genetic System | X-RAY DIFFRACTION | 1.75 | 0 | NAKB_NA_annotation | NAKB_protein_annotation |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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