Equivalence class DNA_3.0_86315.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3IV5|1|C+ 3IV5|1|D (rep) | DNA (27-MER) | Crystal structure of Fis bound to 27 bp optimal binding sequence F1 | X-ray diffraction | 2.9 | 54 | 2010-04-28 | ||||
| 2 | 3JRH|1|C+ 3JRH|1|D | DNA (27-MER) | Crystal structure of Fis bound to 27 bp non consensus sequence DNA F21 | X-ray diffraction | 2.88 | 54 | 2010-04-28 | ||||
| 3 | 3JR9|1|C+ 3JR9|1|D | DNA (27-MER) | Crystal structure of Fis bound to 27 bp optimal binding sequence F2 | X-ray diffraction | 2.9 | 54 | 2010-04-28 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs | NAKB NA annotation | NAKB protein annotation |
|---|---|---|---|---|---|---|---|---|
| 1 | 3JRH|1|C+ 3JRH|1|D | Crystal structure of Fis bound to 27 bp non consensus sequence DNA F21 | X-RAY DIFFRACTION | 2.88 | 54 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription | |
| 2 | 3IV5|1|C+ 3IV5|1|D | Crystal structure of Fis bound to 27 bp optimal binding sequence F1 | X-RAY DIFFRACTION | 2.9 | 54 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription | |
| 3 | 3JR9|1|C+ 3JR9|1|D | Crystal structure of Fis bound to 27 bp optimal binding sequence F2 | X-RAY DIFFRACTION | 2.9 | 54 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),homeodomain,regulatory,transcription |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: