Equivalence class DNA_4.0_41875.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2ISZ|1|E+ 2ISZ|1|F (rep) | mbtA/mbtB operator strand 1, mbtA/mbtB operator strand 2 | Crystal structure of a two-domain IdeR-DNA complex crystal form I | X-ray diffraction | 2.403 | 2007-02-13 | ||||
| 2 | 1U8R|1|E+ 1U8R|1|F | mbtA operator DNA, mbtB operator DNA | Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions | X-ray diffraction | 2.75 | 2004-10-05 | ||||
| 3 | 1U8R|1|K+ 1U8R|1|L | mbtA operator DNA, mbtB operator DNA | Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions | X-ray diffraction | 2.75 | 2004-10-05 | ||||
| 4 | 2IT0|1|E+ 2IT0|1|F | mbtA/mbtB operator strand 1, mbtA/mbtB operator strand 2 | Crystal structure of a two-domain IdeR-DNA complex crystal form II | X-ray diffraction | 2.6 | 2007-02-13 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length | NAKB NA annotation | NAKB protein annotation |
|---|---|---|---|---|---|---|---|---|
| 1 | 1U8R|1|E+ 1U8R|1|F | Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions | X-RAY DIFFRACTION | 2.75 | 33 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead | |
| 2 | 1U8R|1|K+ 1U8R|1|L | Crystal Structure of an IdeR-DNA Complex Reveals a Conformational Change in Activated IdeR for Base-specific Interactions | X-RAY DIFFRACTION | 2.75 | 33 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead | |
| 3 | 2IT0|1|E+ 2IT0|1|F | Crystal structure of a two-domain IdeR-DNA complex crystal form II | X-RAY DIFFRACTION | 2.6 | 33 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead | |
| 4 | 2ISZ|1|E+ 2ISZ|1|F | Crystal structure of a two-domain IdeR-DNA complex crystal form I | X-RAY DIFFRACTION | 2.403 | 33 | B-form double helix,double helix,structure | DNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: