Equivalence class DNA_4.0_83900.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1KBU|1|C+ 1KBU|1|D (rep) | LOXP | CRE RECOMBINASE BOUND TO A LOXP HOLLIDAY JUNCTION | X-ray diffraction | 2.2 | 2002-06-07 | ||||
| 2 | 1PVP|1|C+ 1PVP|1|D | 34-MER | Punavirus P1 | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, ALSHG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 | X-ray diffraction | 2.35 | 2004-02-17 | |||
| 3 | 1PVR|1|C+ 1PVR|1|D | 34-MER | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE LOXP (WILDTYPE) RECOGNITION SITE | X-ray diffraction | 2.65 | 2004-02-17 | ||||
| 4 | 1PVQ|1|C+ 1PVQ|1|D | DNA 34-MER | Punavirus P1 | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 | X-ray diffraction | 2.75 | 2004-02-17 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length | NAKB NA annotation | NAKB protein annotation |
|---|---|---|---|---|---|---|---|---|
| 1 | 1PVR|1|C+ 1PVR|1|D | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE LOXP (WILDTYPE) RECOGNITION SITE | X-RAY DIFFRACTION | 2.65 | 34 | enzyme,recombinase | ||
| 2 | 1KBU|1|C+ 1KBU|1|D | CRE RECOMBINASE BOUND TO A LOXP HOLLIDAY JUNCTION | X-RAY DIFFRACTION | 2.2 | 34 | enzyme,recombinase | ||
| 3 | 1PVQ|1|C+ 1PVQ|1|D | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 | X-RAY DIFFRACTION | 2.75 | 34 | enzyme,recombinase | ||
| 4 | 1PVP|1|C+ 1PVP|1|D | BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, ALSHG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7 | X-RAY DIFFRACTION | 2.35 | 34 | enzyme,recombinase |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: