#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18PFQ|1|A (rep)Chains: A,Bsynthetic constructRNA structure with 1-methylpseudoridine, P1 space groupX-ray diffraction1.012024-01-31
26XUS|1|ARNA dodecamer with a 6-hydrazino-2-aminopurine modified basesynthetic constructRNA dodecamer with a 6-hydrazino-2-aminopurine modified baseX-ray diffraction1.12021-02-03
38PFQ|1|BChains: A,Bsynthetic constructRNA structure with 1-methylpseudoridine, P1 space groupX-ray diffraction1.012024-01-31
42Q1R|1|ARNA (5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*AP*GP*CP*G)-3')Crystal Structure Analysis of the RNA Dodecamer CGCGAAUUAGCG, with a G-A mismatch.X-ray diffraction1.122007-10-30
56XUR|1|ARNA dodecamer with a 6-hydrazino-2-aminopurine modified basechemical production metagenomeRNA dodecamer with a 6-hydrazino-2-aminopurine modified baseX-ray diffraction1.12020-02-19
68PFK|1|ARNA (12-mer)synthetic constructRNA structure with 1-methylpseudoridine, C2 space groupX-ray diffraction1.3212024-01-31

Release history

Release3.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.338
Date2024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16XUS|1|ARNA dodecamer with a 6-hydrazino-2-aminopurine modified baseX-RAY DIFFRACTION1.112
26XUR|1|ARNA dodecamer with a 6-hydrazino-2-aminopurine modified baseX-RAY DIFFRACTION1.111
32Q1R|1|ACrystal Structure Analysis of the RNA Dodecamer CGCGAAUUAGCG, with a G-A mismatch.X-RAY DIFFRACTION1.1212
48PFK|1|ARNA structure with 1-methylpseudoridine, C2 space groupX-RAY DIFFRACTION1.32111
58PFQ|1|ARNA structure with 1-methylpseudoridine, P1 space groupX-RAY DIFFRACTION1.0111
68PFQ|1|BRNA structure with 1-methylpseudoridine, P1 space groupX-RAY DIFFRACTION1.0111

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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