#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18B0X|1|b (rep)5S ribosomal RNA5S rRNAEscherichia coli BBacteriaRF00001Translating 70S ribosome in the unrotated state (P and E, tRNAs)Electron microscopy1.552022-11-30
28CEU|1|b5S ribosomal RNA5S rRNAEscherichia coli BW25113BacteriaRF00001Retapamulin and Capreomycin bound to the 50S subunitElectron microscopy1.832023-07-26
38FTO|1|b5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001E. coli 70S ribosome with an improved MS2 tag inserted in H98Electron microscopy1.852023-08-02
48AYE|1|b5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001E. coli 70S ribosome bound to thermorubin and fMet-tRNAElectron microscopy1.962023-03-01
57K00|1|b5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.982020-09-23
68CGD|1|b5S ribosomal RNA5S rRNAEscherichia coli BW25113BacteriaRF00001Clindamycin bound to the 50S subunitElectron microscopy1.982023-07-26
78QOA|1|b5S ribosomal RNA5S rRNAEscherichia coli BW25113BacteriaRF00001Structure of SecM-stalled Escherichia coli 70S ribosomeElectron microscopy22024-03-20
88E30|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound streptogramin A analog 3142Electron microscopy1.912023-06-28
98E3O|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to solithromycin and VM1Electron microscopy1.992023-06-28
108CGV|1|b5S ribosomal RNA5S rRNAEscherichia coli BW25113BacteriaRF00001Tiamulin bound to the 50S subunitElectron microscopy1.662023-08-02
118CGK|1|b5S ribosomal RNA5S rRNAEscherichia coli BW25113BacteriaRF00001Lincomycin and Avilamycin bound to the 50S subunitElectron microscopy1.642023-07-19
128CAM|1|b5S ribosomal RNA5S rRNAEscherichia coli BW25113BacteriaRF00001Evernimicin bound to the 50S subunitElectron microscopy1.862023-07-26

Release history

Release3.3373.338
Date2024-05-292024-06-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18QOA|1|bStructure of SecM-stalled Escherichia coli 70S ribosomeELECTRON MICROSCOPY2119
28B0X|1|bTranslating 70S ribosome in the unrotated state (P and E, tRNAs)ELECTRON MICROSCOPY1.55119
38FTO|1|bE. coli 70S ribosome with an improved MS2 tag inserted in H98ELECTRON MICROSCOPY1.85119
47K00|1|bStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.98119
58AYE|1|bE. coli 70S ribosome bound to thermorubin and fMet-tRNAELECTRON MICROSCOPY1.96119
68CGV|1|bTiamulin bound to the 50S subunitELECTRON MICROSCOPY1.6656
78CEU|1|bRetapamulin and Capreomycin bound to the 50S subunitELECTRON MICROSCOPY1.83119
88CGD|1|bClindamycin bound to the 50S subunitELECTRON MICROSCOPY1.98119
98CAM|1|bEvernimicin bound to the 50S subunitELECTRON MICROSCOPY1.8634
108CGK|1|bLincomycin and Avilamycin bound to the 50S subunitELECTRON MICROSCOPY1.6439
118E30|1|JE. coli 50S ribosome bound to compound streptogramin A analog 3142ELECTRON MICROSCOPY1.91118
128E3O|1|JE. coli 50S ribosome bound to solithromycin and VM1ELECTRON MICROSCOPY1.99118

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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