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Equivalence class NR_2.0_54592.2 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
1464D|1|A+ 464D|1|B (rep)RNA (5'-R(*GP*GP*GP*GP*CP*(IU)P*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIXX-ray diffraction1.23141999-08-16
2464D|1|C+ 464D|1|DRNA (5'-R(*GP*GP*GP*GP*CP*(IU)P*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIXX-ray diffraction1.23141999-08-16
3466D|1|C+ 466D|1|DRNA (5'-R(*GP*GP*GP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIXX-ray diffraction1.16141999-08-16
4466D|1|A+ 466D|1|BRNA (5'-R(*GP*GP*GP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIXX-ray diffraction1.16141999-08-16
54U34|1|A+ 4U34|1|BRNA (5'-R(*GP*GP*AP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*(SUR)P*CP*C-3')synthetic constructCrystal Structures of RNA Duplexes Containing 2-thio-UridineX-ray diffraction1.35142014-08-13
64U35|1|A+ 4U35|1|BRNA (5'-R(*GP*GP*UP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*(SUR)P*CP*C-3')synthetic constructCrystal Structures of RNA Duplexes Containing 2-thio-UridineX-ray diffraction1.55142014-08-13
74U37|1|A+ 4U37|1|BRNA (5'-R(*GP*GP*AP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')synthetic constructNative 7mer-RNA duplexX-ray diffraction1.55142014-08-13
84U38|1|A+ 4U38|1|BRNA (5'-R(*GP*GP*UP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')synthetic constructRNA duplex containing UU mispairX-ray diffraction1.8142014-08-13
94U38|1|C+ 4U38|1|DRNA (5'-R(*GP*GP*UP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')synthetic constructRNA duplex containing UU mispairX-ray diffraction1.8142014-08-13
104U38|1|E+ 4U38|1|FRNA (5'-R(*GP*GP*UP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')synthetic constructRNA duplex containing UU mispairX-ray diffraction1.8142014-08-13
114U38|1|G+ 4U38|1|HRNA (5'-R(*GP*GP*UP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')synthetic constructRNA duplex containing UU mispairX-ray diffraction1.8142014-08-13
12434D|1|C+ 434D|1|DRNA (5'-R(*GP*GP*GP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')5'-R(*UP*AP*GP*CP*UP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3'X-ray diffraction1.16141999-06-14
13434D|1|A+ 434D|1|BRNA (5'-R(*GP*GP*GP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')5'-R(*UP*AP*GP*CP*UP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3'X-ray diffraction1.16141999-06-14

Release history

Release3.3783.3793.3803.3813.382
Date2025-03-132025-03-192025-03-262025-04-022025-04-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
14U35|1|A+ 4U35|1|BCrystal Structures of RNA Duplexes Containing 2-thio-UridineX-RAY DIFFRACTION1.5514
2466D|1|A+ 466D|1|BDISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIXX-RAY DIFFRACTION1.1614
3434D|1|A+ 434D|1|B5'-R(*UP*AP*GP*CP*UP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3'X-RAY DIFFRACTION1.1614
4464D|1|A+ 464D|1|BDISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIXX-RAY DIFFRACTION1.2314
54U38|1|E+ 4U38|1|FRNA duplex containing UU mispairX-RAY DIFFRACTION1.814
64U37|1|A+ 4U37|1|BNative 7mer-RNA duplexX-RAY DIFFRACTION1.5514
74U34|1|A+ 4U34|1|BCrystal Structures of RNA Duplexes Containing 2-thio-UridineX-RAY DIFFRACTION1.3514
84U38|1|G+ 4U38|1|HRNA duplex containing UU mispairX-RAY DIFFRACTION1.814
94U38|1|A+ 4U38|1|BRNA duplex containing UU mispairX-RAY DIFFRACTION1.814
104U38|1|C+ 4U38|1|DRNA duplex containing UU mispairX-RAY DIFFRACTION1.814
11466D|1|C+ 466D|1|DDISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIXX-RAY DIFFRACTION1.1614
12434D|1|C+ 434D|1|D5'-R(*UP*AP*GP*CP*UP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3'X-RAY DIFFRACTION1.1614
13464D|1|C+ 464D|1|DDISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIXX-RAY DIFFRACTION1.2314

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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