Equivalence class NR_2.0_56726.103 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8B0X|1|A (rep) | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli B | Bacteria | RF00177 | Translating 70S ribosome in the unrotated state (P and E, tRNAs) | Electron microscopy | 1.55 | 1500 | 2022-11-30 |
| 2 | 8AYE|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S ribosome bound to thermorubin and fMet-tRNA | Electron microscopy | 1.96 | 1519 | 2023-03-01 |
| 3 | 7K00|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | Electron microscopy | 1.98 | 1519 | 2020-09-23 |
| 4 | 8CGJ|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Streptomycin bound to the 30S body | Electron microscopy | 1.79 | 1130 | 2023-07-26 |
| 5 | 8CGU|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Gentamicin bound to the 30S body | Electron microscopy | 1.89 | 1047 | 2023-07-26 |
| 6 | 8CF1|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Tetracycline bound to the 30S head | Electron microscopy | 1.82 | 485 | 2023-07-26 |
| 7 | 8CGI|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli BW25113 | Bacteria | RF00177 | Pentacycline TP038 bound to the 30S head | Electron microscopy | 1.89 | 460 | 2023-07-26 |
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 8CGI|1|A | Pentacycline TP038 bound to the 30S head | ELECTRON MICROSCOPY | 1.89 | 460 | |
| 2 | 8CF1|1|A | Tetracycline bound to the 30S head | ELECTRON MICROSCOPY | 1.82 | 485 | |
| 3 | 8CGJ|1|A | Streptomycin bound to the 30S body | ELECTRON MICROSCOPY | 1.79 | 1130 | |
| 4 | 7K00|1|A | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | ELECTRON MICROSCOPY | 1.98 | 1519 | |
| 5 | 8CGU|1|A | Gentamicin bound to the 30S body | ELECTRON MICROSCOPY | 1.89 | 1047 | |
| 6 | 8AYE|1|A | E. coli 70S ribosome bound to thermorubin and fMet-tRNA | ELECTRON MICROSCOPY | 1.96 | 1519 | |
| 7 | 8B0X|1|A | Translating 70S ribosome in the unrotated state (P and E, tRNAs) | ELECTRON MICROSCOPY | 1.55 | 1500 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: