#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18B0X|1|a (rep)Large subunit ribosomal RNA23S rRNAEscherichia coli BBacteriaRF02541Translating 70S ribosome in the unrotated state (P and E, tRNAs)Electron microscopy1.552022-11-30
28CGK|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Lincomycin and Avilamycin bound to the 50S subunitElectron microscopy1.642023-07-19
38E30|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin A analog 3142Electron microscopy1.912023-06-28
48CEU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Retapamulin and Capreomycin bound to the 50S subunitElectron microscopy1.832023-07-26
58E3O|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to solithromycin and VM1Electron microscopy1.992023-06-28
68CAM|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Evernimicin bound to the 50S subunitElectron microscopy1.862023-07-26
78AYE|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome bound to thermorubin and fMet-tRNAElectron microscopy1.962023-03-01
87K00|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.982020-09-23
98CGD|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Clindamycin bound to the 50S subunitElectron microscopy1.982023-07-26
108CGJ|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Streptomycin bound to the 30S bodyElectron microscopy1.792023-07-26
118CGU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Gentamicin bound to the 30S bodyElectron microscopy1.892023-07-26

Release history

Release3.293
Date2023-07-26

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.0_83717.119NR_2.0_83717.1183.293(6) 7K00|1|a, 8AYE|1|a, 8B0X|1|a, 8CGK|1|a, 8E30|1|I, 8E3O|1|I(5) 8CAM|1|a, 8CEU|1|a, 8CGD|1|a, 8CGJ|1|a, 8CGU|1|a(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.0_83717.119NR_2.0_83717.1203.294(11) 7K00|1|a, 8AYE|1|a, 8B0X|1|a, 8CAM|1|a, 8CEU|1|a, 8CGD|1|a, 8CGJ|1|a, 8CGK|1|a, 8CGU|1|a, 8E30|1|I, 8E3O|1|I(0) (2) 8CGV|1|a, 8FTO|1|a

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18CEU|1|aRetapamulin and Capreomycin bound to the 50S subunitELECTRON MICROSCOPY1.832729
28CGD|1|aClindamycin bound to the 50S subunitELECTRON MICROSCOPY1.982724
38CAM|1|aEvernimicin bound to the 50S subunitELECTRON MICROSCOPY1.862669
48CGK|1|aLincomycin and Avilamycin bound to the 50S subunitELECTRON MICROSCOPY1.642678
58AYE|1|aE. coli 70S ribosome bound to thermorubin and fMet-tRNAELECTRON MICROSCOPY1.962731
67K00|1|aStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982729
78B0X|1|aTranslating 70S ribosome in the unrotated state (P and E, tRNAs)ELECTRON MICROSCOPY1.552724
88E30|1|IE. coli 50S ribosome bound to compound streptogramin A analog 3142ELECTRON MICROSCOPY1.912877
98E3O|1|IE. coli 50S ribosome bound to solithromycin and VM1ELECTRON MICROSCOPY1.992876
108CGU|1|aGentamicin bound to the 30S bodyELECTRON MICROSCOPY1.8928
118CGJ|1|aStreptomycin bound to the 30S bodyELECTRON MICROSCOPY1.7928

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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