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Equivalence class NR_2.0_86909.2 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
17A9N|1|K+ 7A9N|1|L (rep)RNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.602162021-05-26
26ZRS|1|K+ 6ZRS|1|LRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.52162021-05-26
37A9O|1|K+ 7A9O|1|LRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.601162021-05-26
46ZR1|1|K+ 6ZR1|1|LRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.528162021-05-26
56ZQ9|1|K+ 6ZQ9|1|LRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.5162021-05-26
66ZPF|1|K+ 6ZPF|1|LRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.442162021-05-26
76ZWU|1|M+ 6ZWU|1|NRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.527162021-05-26
87A9T|1|K+ 7A9T|1|LRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.7162021-05-26
96ZW3|1|M+ 6ZW3|1|NRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.522162021-05-26
106ZX5|1|K+ 6ZX5|1|LRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.523162021-05-26
11439D|1|A+ 439D|1|BRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'X-ray diffraction1.6162001-09-14
127A9L|1|M+ 7A9L|1|NRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.98162021-05-26
136ZRL|1|M+ 6ZRL|1|NRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.53162021-05-26
146ZX8|1|K+ 6ZX8|1|LRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.981162021-05-26
157A9P|1|M+ 7A9P|1|NRNA (5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'), RNA (5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3')Thermus thermophilusRacemic compound of RNA duplexes.X-ray diffraction1.985162021-05-26

Release history

Release3.3783.3793.3803.3813.3823.383
Date2025-03-132025-03-192025-03-262025-04-022025-04-092025-04-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
17A9P|1|M+ 7A9P|1|NRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.98516
26ZWU|1|M+ 6ZWU|1|NRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.52716
37A9L|1|M+ 7A9L|1|NRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.9816
46ZW3|1|M+ 6ZW3|1|NRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.52216
56ZRL|1|M+ 6ZRL|1|NRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.5316
67A9O|1|K+ 7A9O|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.60116
76ZR1|1|K+ 6ZR1|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.52816
87A9T|1|K+ 7A9T|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.716
97A9N|1|K+ 7A9N|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.60216
106ZRS|1|K+ 6ZRS|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.5216
116ZPF|1|K+ 6ZPF|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.44216
126ZX5|1|K+ 6ZX5|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.52316
136ZQ9|1|K+ 6ZQ9|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.516
146ZX8|1|K+ 6ZX8|1|LRacemic compound of RNA duplexes.X-RAY DIFFRACTION1.98116
15439D|1|A+ 439D|1|B5'-R(*CP*UP*GP*GP*GP*CP*GP*G)-3', 5'-R(*CP*CP*GP*CP*CP*UP*GP*G)-3'X-RAY DIFFRACTION1.616

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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