Equivalence class NR_2.5_01073.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5NWQ|1|A (rep) | Guanidine-III riboswitch | Guanidine III riboswitch | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch with guanidine. | X-ray diffraction | 1.91 | 41 | 2017-10-18 |
| 2 | 5NY8|1|A | Guanidine-III riboswitch | RNA (41-MER) | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch with aminoguanidine | X-ray diffraction | 2.04 | 41 | 2017-10-18 |
| 3 | 5NZD|1|A | Guanidine-III riboswitch | guanidine III riboswitch | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch in space group P212121. | X-ray diffraction | 2.01 | 41 | 2017-10-18 |
| 4 | 5NZD|1|B | Guanidine-III riboswitch | guanidine III riboswitch | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch in space group P212121. | X-ray diffraction | 2.01 | 41 | 2017-10-18 |
| 5 | 5NWQ|1|B | Guanidine-III riboswitch | Guanidine III riboswitch | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch with guanidine. | X-ray diffraction | 1.91 | 41 | 2017-10-18 |
| 6 | 5O62|1|A | Guanidine-III riboswitch | RNA (41-MER) | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch with 1-Ethylguanidine. | X-ray diffraction | 2.12 | 41 | 2017-10-18 |
| 7 | 5NZ3|1|A | Guanidine-III riboswitch | RNA (41-MER) | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch with methylguanidine | X-ray diffraction | 2.06 | 41 | 2017-10-18 |
| 8 | 5O69|1|A | Guanidine-III riboswitch | RNA (41-MER) | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch with agmatine. | X-ray diffraction | 2.32 | 41 | 2017-10-18 |
| 9 | 5NY8|1|B | Guanidine-III riboswitch | RNA (41-MER) | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch with aminoguanidine | X-ray diffraction | 2.04 | 41 | 2017-10-18 |
| 10 | 5NZ3|1|B | Guanidine-III riboswitch | RNA (41-MER) | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch with methylguanidine | X-ray diffraction | 2.06 | 41 | 2017-10-18 |
| 11 | 5O62|1|B | Guanidine-III riboswitch | RNA (41-MER) | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch with 1-Ethylguanidine. | X-ray diffraction | 2.12 | 33 | 2017-10-18 |
| 12 | 5O69|1|B | Guanidine-III riboswitch | RNA (37-MER) | Thermobifida fusca | Bacteria | RF01763 | The structure of the thermobifida fusca guanidine III riboswitch with agmatine. | X-ray diffraction | 2.32 | 37 | 2017-10-18 |
Release history
| Release | 3.378 | 3.379 | 3.380 | 3.381 | 3.382 | 3.383 | 3.384 | 3.385 | 3.386 | 3.387 | 3.388 | 3.389 | 3.390 | 3.391 | 3.392 | 3.393 | 3.394 | 3.395 | 3.396 | 3.397 | 3.398 | 3.399 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-03-13 | 2025-03-19 | 2025-03-26 | 2025-04-02 | 2025-04-09 | 2025-04-16 | 2025-04-23 | 2025-04-30 | 2025-05-07 | 2025-05-14 | 2025-05-21 | 2025-05-28 | 2025-06-04 | 2025-06-11 | 2025-06-18 | 2025-06-25 | 2025-07-02 | 2025-07-09 | 2025-07-16 | 2025-07-23 | 2025-07-30 | 2025-08-06 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 5O62|1|A | The structure of the thermobifida fusca guanidine III riboswitch with 1-Ethylguanidine. | X-RAY DIFFRACTION | 2.12 | 41 | |
| 2 | 5O69|1|A | The structure of the thermobifida fusca guanidine III riboswitch with agmatine. | X-RAY DIFFRACTION | 2.32 | 41 | |
| 3 | 5NWQ|1|A | The structure of the thermobifida fusca guanidine III riboswitch with guanidine. | X-RAY DIFFRACTION | 1.91 | 41 | |
| 4 | 5NY8|1|A | The structure of the thermobifida fusca guanidine III riboswitch with aminoguanidine | X-RAY DIFFRACTION | 2.04 | 41 | |
| 5 | 5NZ3|1|A | The structure of the thermobifida fusca guanidine III riboswitch with methylguanidine | X-RAY DIFFRACTION | 2.06 | 41 | |
| 6 | 5NZD|1|B | The structure of the thermobifida fusca guanidine III riboswitch in space group P212121. | X-RAY DIFFRACTION | 2.01 | 41 | |
| 7 | 5O69|1|B | The structure of the thermobifida fusca guanidine III riboswitch with agmatine. | X-RAY DIFFRACTION | 2.32 | 37 | |
| 8 | 5NY8|1|B | The structure of the thermobifida fusca guanidine III riboswitch with aminoguanidine | X-RAY DIFFRACTION | 2.04 | 41 | |
| 9 | 5NWQ|1|B | The structure of the thermobifida fusca guanidine III riboswitch with guanidine. | X-RAY DIFFRACTION | 1.91 | 41 | |
| 10 | 5O62|1|B | The structure of the thermobifida fusca guanidine III riboswitch with 1-Ethylguanidine. | X-RAY DIFFRACTION | 2.12 | 33 | |
| 11 | 5NZ3|1|B | The structure of the thermobifida fusca guanidine III riboswitch with methylguanidine | X-RAY DIFFRACTION | 2.06 | 41 | |
| 12 | 5NZD|1|A | The structure of the thermobifida fusca guanidine III riboswitch in space group P212121. | X-RAY DIFFRACTION | 2.01 | 41 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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