Equivalence class NR_2.5_08417.6 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8RWG|1|A (rep) | Large subunit ribosomal RNA | 23S ribosomal RNA | Pseudomonas aeruginosa PAO1 | Bacteria | RF02541 | PAO1 wild-type ribosome, R, reference map | Electron microscopy | 2.46 | 2805 | 2025-02-12 |
| 2 | 9Q42|1|A | Large subunit ribosomal RNA | 23S rRNA | Pseudomonas aeruginosa PAO1 | Bacteria | RF02541 | Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk 'in' conformation) | Electron microscopy | 2.29 | 2837 | 2026-08-26 |
| 3 | 9Q40|1|A | Large subunit ribosomal RNA | 23S rRNA | Pseudomonas aeruginosa PAO1 | Bacteria | RF02541 | Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk in 'mid' conformation) | Electron microscopy | 2.29 | 2837 | 2026-08-26 |
| 4 | 9Q43|1|A | Large subunit ribosomal RNA | 23S rRNA | Pseudomonas aeruginosa PAO1 | Bacteria | RF02541 | Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk in 'out' conformation) | Electron microscopy | 2.29 | 2837 | 2026-08-26 |
| 5 | 9Q44|1|A | Large subunit ribosomal RNA | 23S rRNA | Pseudomonas aeruginosa PAO1 | Bacteria | RF02541 | Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk in 'out' conformation and missing uL1 and tRNA) | Electron microscopy | 2.29 | 2837 | 2026-08-26 |
Release history
| Release | 4.54 |
|---|---|
| Date | 2026-08-26 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9Q44|1|A | Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk in 'out' conformation and missing uL1 and tRNA) | ELECTRON MICROSCOPY | 2.29 | 2837 | |
| 2 | 8RWG|1|A | PAO1 wild-type ribosome, R, reference map | ELECTRON MICROSCOPY | 2.46 | 2805 | |
| 3 | 9Q43|1|A | Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk in 'out' conformation) | ELECTRON MICROSCOPY | 2.29 | 2837 | |
| 4 | 9Q40|1|A | Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk in 'mid' conformation) | ELECTRON MICROSCOPY | 2.29 | 2837 | |
| 5 | 9Q42|1|A | Pseudomonas aeruginosa 50S ribosome bound to RsfS (L1 stalk 'in' conformation) | ELECTRON MICROSCOPY | 2.29 | 2837 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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