#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14J7L|1|B (rep)RNA (5'-R(P*UP*UP*UP*UP*U)-3')synthetic constructCrystal structure of mouse DXO in complex with PRODUCT RNA AND two MAGNESIUM ionsX-ray diffraction1.82013-03-27
25W0M|1|JU5 single-stranded RNAsynthetic constructStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-ray diffraction2.32017-06-28
35BUD|1|ERNA (5'-R(P*UP*UP*UP*U)-3')Candida albicansCrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-ray diffraction1.992015-07-08
45W0M|1|IU5 single-stranded RNAsynthetic constructStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-ray diffraction2.32017-06-28
55W0M|1|HU5 single-stranded RNAsynthetic constructStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-ray diffraction2.32017-06-28
64J7M|1|BRNA (5'-R(P*UP*(U37)P*(U37)P*UP*U)-3')synthetic constructCrystal structure of mouse DXO in complex with substrate mimic RNA and calcium ionX-ray diffraction1.72013-03-27
75BUD|1|DRNA (5'-R(P*UP*UP*UP*U)-3')Candida albicansCrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-ray diffraction1.992015-07-08
86A4E|1|BRNA (5'-R(P*UP*UP*UP*UP*U)-3')synthetic constructTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-ray diffraction2.452019-03-13
96A4E|1|DRNA (5'-R(P*UP*UP*UP*UP*U)-3')synthetic constructTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-ray diffraction2.452019-03-13

Release history

Release3.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.318
Date2023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-17

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_17996.6NR_2.5_17996.53.283(9) 4J7L|1|B, 4J7M|1|B, 5BUD|1|D, 5BUD|1|E, 5W0M|1|H, 5W0M|1|I, 5W0M|1|J, 6A4E|1|B, 6A4E|1|D(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14J7M|1|BCrystal structure of mouse DXO in complex with substrate mimic RNA and calcium ionX-RAY DIFFRACTION1.73
24J7L|1|BCrystal structure of mouse DXO in complex with PRODUCT RNA AND two MAGNESIUM ionsX-RAY DIFFRACTION1.85
35BUD|1|ECrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-RAY DIFFRACTION1.995
45BUD|1|DCrystal structure of Candida albicans Rai1 in complex with pU5-Mn2+X-RAY DIFFRACTION1.994
55W0M|1|JStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.34
65W0M|1|IStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.34
75W0M|1|HStructure of human TUT7 catalytic module (CM) in complex with U5 RNAX-RAY DIFFRACTION2.34
86A4E|1|BTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-RAY DIFFRACTION2.452
96A4E|1|DTwo linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34HX-RAY DIFFRACTION2.452

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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