#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17UOO|1|3 (rep)5S ribosomal RNA5S rRNASaccharomyces cerevisiae BY4741EukaryaRF00001Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation stateElectron microscopy2.342023-03-15
27V08|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiae BY4741EukaryaRF00001Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strainElectron microscopy2.362023-03-15
37ZW0|1|LC5S ribosomal RNA5S ribosomal RNA (RDN5-1)Saccharomyces cerevisiae W303EukaryaRF00001FAP-80S Complex - Rotated stateElectron microscopy2.42022-10-05
48AGX|1|h5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast RQC complex in state with the RING domain of Ltn1 in the IN positionElectron microscopy2.42023-03-08
57TOP|1|A5S5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.42022-05-25
67UQB|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiae BY4741EukaryaRF00001Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4Electron microscopy2.432023-03-15
77UQZ|1|35S ribosomal RNA5S rRNASaccharomyces cerevisiae BY4741EukaryaRF00001Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strainElectron microscopy2.442023-03-15
87ZUX|1|45S ribosomal RNA5S ribosomal RNASaccharomyces cerevisiaeEukaryaRF00001Collided ribosome in a disome unit from S. cerevisiaeElectron microscopy2.52023-02-22
98AAF|1|h5S ribosomal RNA5S rRNASaccharomyces cerevisiaeEukaryaRF00001Yeast RQC complex in state GElectron microscopy2.52023-03-08

Release history

Release3.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.298
Date2023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_18586.57NR_2.5_18586.563.287(9) 7TOP|1|A5S, 7UOO|1|3, 7UQB|1|3, 7UQZ|1|3, 7V08|1|3, 7ZUX|1|4, 7ZW0|1|LC, 8AAF|1|h, 8AGX|1|h(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_18586.57NR_2.5_18586.583.299(9) 7TOP|1|A5S, 7UOO|1|3, 7UQB|1|3, 7UQZ|1|3, 7V08|1|3, 7ZUX|1|4, 7ZW0|1|LC, 8AAF|1|h, 8AGX|1|h(0) (3) 8EVP|1|A3, 8EVT|1|A3, 8EWC|1|A3

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17ZUX|1|4Collided ribosome in a disome unit from S. cerevisiaeELECTRON MICROSCOPY2.5121
27ZW0|1|LCFAP-80S Complex - Rotated stateELECTRON MICROSCOPY2.4121
38AGX|1|hYeast RQC complex in state with the RING domain of Ltn1 in the IN positionELECTRON MICROSCOPY2.4121
48AAF|1|hYeast RQC complex in state GELECTRON MICROSCOPY2.5121
57TOP|1|A5SYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.4121
67UQB|1|3Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4ELECTRON MICROSCOPY2.43120
77UOO|1|3Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation stateELECTRON MICROSCOPY2.34120
87UQZ|1|3Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strainELECTRON MICROSCOPY2.44120
97V08|1|3Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strainELECTRON MICROSCOPY2.36120

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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