#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
19NO7|1|B (rep)5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolutionElectron microscopy2.131202025-06-18
28VTW|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolutionX-ray diffraction2.351202024-08-07
37RQB|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolutionX-ray diffraction2.451202022-01-26
49D0J|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with BT-33, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.51202024-11-20
59DFC|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.51202024-11-20
68VTW|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolutionX-ray diffraction2.351202024-08-07
79MTP|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolutionX-ray diffraction2.41202025-06-18
88FC6|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolutionX-ray diffraction2.351202023-07-26
98FC2|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolutionX-ray diffraction2.51202023-07-12
108G2A|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.451202023-12-27
118FC1|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.50A resolutionX-ray diffraction2.51202023-07-12
127RQB|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolutionX-ray diffraction2.451202022-01-26
138VTU|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.41202024-08-07
148FC6|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolutionX-ray diffraction2.351202023-07-26
158VTX|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.41202024-08-07
168FC2|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolutionX-ray diffraction2.51202023-07-12
178G2A|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.451202023-12-27
184Y4O|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-ray diffraction2.31202015-03-18
199DFC|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.51202024-11-20
204Y4O|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-ray diffraction2.31202015-03-18
217RQE|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolutionX-ray diffraction2.41202022-01-26
228VTU|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.41202024-08-07
238FC4|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolutionX-ray diffraction2.451202023-07-26
247RQ8|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.51202021-10-13
258VTX|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.41202024-08-07
269MTP|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolutionX-ray diffraction2.41202025-06-18
277RQC|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolutionX-ray diffraction2.51202022-01-26
287RQE|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolutionX-ray diffraction2.41202022-01-26
298CVK|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.51202022-10-19
306XHW|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.51202020-12-23
318FC1|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.50A resolutionX-ray diffraction2.51202023-07-12
327RQD|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolutionX-ray diffraction2.51202022-01-26
336XHV|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.41202020-12-23
349D0J|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with BT-33, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.51202024-11-20
358FC4|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolutionX-ray diffraction2.451202023-07-26
367RQC|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolutionX-ray diffraction2.51202022-01-26
378CVJ|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.41202022-10-19
388CVK|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.51202022-10-19
398CVL|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.31202022-10-19
407RQA|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolutionX-ray diffraction2.41202022-01-26
416XHV|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.41202020-12-23
427RQD|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolutionX-ray diffraction2.51202022-01-26
436XHW|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.51202020-12-23
444W2F|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.41202014-10-15
457RQ8|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.51202021-10-13
464Y4P|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.51202015-03-18
477RQA|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolutionX-ray diffraction2.41202022-01-26
488CVJ|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.41202022-10-19
498CVL|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.31202022-10-19
504W2F|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.41202014-10-15
514Y4P|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.51202015-03-18

Release history

Release4.0
Date2025-08-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
16XHV|1|2BCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.4120
26XHV|1|1BCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.4120
39MTP|1|1BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolutionX-RAY DIFFRACTION2.4120
49D0J|1|1BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with BT-33, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.5120
58VTX|1|1BCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.4120
68CVL|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.3120
78G2A|1|1BCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.45120
88VTU|1|1BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.4120
99DFC|1|1BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.5120
104W2F|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.4120
114Y4P|1|1BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.5120
127RQ8|1|1BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.5120
136XHW|1|1BCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.5120
148CVJ|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.4120
158CVK|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.5120
167RQC|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolutionX-RAY DIFFRACTION2.5120
178FC2|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolutionX-RAY DIFFRACTION2.5120
187RQE|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolutionX-RAY DIFFRACTION2.4120
197RQD|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolutionX-RAY DIFFRACTION2.5120
207RQB|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolutionX-RAY DIFFRACTION2.45120
218VTW|1|1BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolutionX-RAY DIFFRACTION2.35120
228FC6|1|1BCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolutionX-RAY DIFFRACTION2.35120
234Y4O|1|1BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.3120
248FC1|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.50A resolutionX-RAY DIFFRACTION2.5120
258FC4|1|1BCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolutionX-RAY DIFFRACTION2.45120
267RQA|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolutionX-RAY DIFFRACTION2.4120
277RQA|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolutionX-RAY DIFFRACTION2.4120
288FC2|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolutionX-RAY DIFFRACTION2.5120
298FC6|1|2BCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolutionX-RAY DIFFRACTION2.35120
307RQB|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolutionX-RAY DIFFRACTION2.45120
318VTW|1|2BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolutionX-RAY DIFFRACTION2.35120
324Y4O|1|2BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.3120
337RQC|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolutionX-RAY DIFFRACTION2.5120
347RQE|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolutionX-RAY DIFFRACTION2.4120
357RQD|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolutionX-RAY DIFFRACTION2.5120
368FC4|1|2BCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolutionX-RAY DIFFRACTION2.45120
378FC1|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.50A resolutionX-RAY DIFFRACTION2.5120
389MTP|1|2BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolutionX-RAY DIFFRACTION2.4120
394W2F|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.4120
409DFC|1|2BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.5120
418VTU|1|2BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.4120
428G2A|1|2BCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.45120
438VTX|1|2BCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.4120
449D0J|1|2BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with BT-33, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.5120
458CVL|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.3120
468CVK|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.5120
478CVJ|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.4120
486XHW|1|2BCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.5120
497RQ8|1|2BCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.5120
504Y4P|1|2BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.5120
519NO7|1|BCryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolutionELECTRON MICROSCOPY2.13120

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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