RNA 3D Hub //

Equivalence class NR_2.5_48488.1 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
13OL9|1|N+ 3OL9|1|O+ 3OL9|1|P (rep)RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.25382010-12-22
23OL9|1|J+ 3OL9|1|K+ 3OL9|1|LRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3'), RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.25382010-12-22
33OL9|1|F+ 3OL9|1|GRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.25332010-12-22
43OL9|1|B+ 3OL9|1|CRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C))-3')Poliovirus polymerase elongation complex with 3'-deoxy-CTPX-ray diffraction2.25332010-12-22
53OLB|1|N+ 3OLB|1|ORNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.41332010-12-22
63OLB|1|J+ 3OLB|1|KRNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.41332010-12-22
73OLB|1|F+ 3OLB|1|GRNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.41322010-12-22
83OLB|1|B+ 3OLB|1|CRNA (5'-R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-ray diffraction2.41322010-12-22
93OL6|1|B+ 3OL6|1|CRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.5322010-12-22
103OL6|1|F+ 3OL6|1|GRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.5322010-12-22
113OL6|1|N+ 3OL6|1|ORNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.5332010-12-22
123OL6|1|J+ 3OL6|1|KRNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*GP*AP*AP*A)-3'), RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')Poliovirus polymerase elongation complexX-ray diffraction2.5332010-12-22

Release history

Release3.3783.3793.3803.3813.3823.3833.3843.3853.3863.3873.3883.389
Date2025-03-132025-03-192025-03-262025-04-022025-04-092025-04-162025-04-232025-04-302025-05-072025-05-142025-05-212025-05-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
13OLB|1|B+ 3OLB|1|CPoliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4132
23OLB|1|F+ 3OLB|1|GPoliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4132
33OLB|1|J+ 3OLB|1|KPoliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4133
43OLB|1|N+ 3OLB|1|OPoliovirus polymerase elongation complex with 2',3'-dideoxy-ctpX-RAY DIFFRACTION2.4133
53OL9|1|J+ 3OL9|1|K+ 3OL9|1|LPoliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2538
63OL9|1|N+ 3OL9|1|O+ 3OL9|1|PPoliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2538
73OL9|1|B+ 3OL9|1|CPoliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2533
83OL9|1|F+ 3OL9|1|GPoliovirus polymerase elongation complex with 3'-deoxy-CTPX-RAY DIFFRACTION2.2533
93OL6|1|F+ 3OL6|1|GPoliovirus polymerase elongation complexX-RAY DIFFRACTION2.532
103OL6|1|B+ 3OL6|1|CPoliovirus polymerase elongation complexX-RAY DIFFRACTION2.532
113OL6|1|J+ 3OL6|1|KPoliovirus polymerase elongation complexX-RAY DIFFRACTION2.533
123OL6|1|N+ 3OL6|1|OPoliovirus polymerase elongation complexX-RAY DIFFRACTION2.533

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0334 s