NR_2.5_65795.78

Members (45)
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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	8VTW\|1\|1a (rep)	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution	X-ray diffraction	2.35	2024-08-07
2	8VTW\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution	X-ray diffraction	2.35	2024-08-07
3	4Y4O\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-ray diffraction	2.3	2015-03-18
4	7RQB\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution	X-ray diffraction	2.45	2022-01-26
5	8FC6\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolution	X-ray diffraction	2.35	2023-07-26
6	4Y4O\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-ray diffraction	2.3	2015-03-18
7	8FC2\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolution	X-ray diffraction	2.5	2023-07-12
8	8FC6\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolution	X-ray diffraction	2.35	2023-07-26
9	8FC2\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolution	X-ray diffraction	2.5	2023-07-12
10	7RQB\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution	X-ray diffraction	2.45	2022-01-26
11	8FC1\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.50A resolution	X-ray diffraction	2.5	2023-07-12
12	8VTU\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-ray diffraction	2.4	2024-08-07
13	8G2A\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution	X-ray diffraction	2.45	2023-12-27
14	8G2A\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution	X-ray diffraction	2.45	2023-12-27
15	8VTU\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-ray diffraction	2.4	2024-08-07
16	7RQE\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolution	X-ray diffraction	2.4	2022-01-26
17	8VTX\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-ray diffraction	2.4	2024-08-07
18	8FC1\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.50A resolution	X-ray diffraction	2.5	2023-07-12
19	7RQ8\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-ray diffraction	2.5	2021-10-13
20	7RQE\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolution	X-ray diffraction	2.4	2022-01-26
21	8VTX\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-ray diffraction	2.4	2024-08-07
22	7RQC\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution	X-ray diffraction	2.5	2022-01-26
23	6XHW\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-ray diffraction	2.5	2020-12-23
24	8FC4\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolution	X-ray diffraction	2.45	2023-07-26
25	2VQE\|1\|A	Small subunit ribosomal RNA	16S RRNA	Thermus thermophilus	Bacteria	RF00177	Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding	X-ray diffraction	2.5	2008-04-29
26	7RQC\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution	X-ray diffraction	2.5	2022-01-26
27	6XHV\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-ray diffraction	2.4	2020-12-23
28	7RQ8\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-ray diffraction	2.5	2021-10-13
29	8CVK\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution	X-ray diffraction	2.5	2022-10-19
30	7RQD\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolution	X-ray diffraction	2.5	2022-01-26
31	8FC4\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolution	X-ray diffraction	2.45	2023-07-26
32	6XHV\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-ray diffraction	2.4	2020-12-23
33	6XHW\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-ray diffraction	2.5	2020-12-23
34	7RQD\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolution	X-ray diffraction	2.5	2022-01-26
35	4Y4P\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
36	4W2F\|1\|AA	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
37	8CVK\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution	X-ray diffraction	2.5	2022-10-19
38	8CVJ\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-ray diffraction	2.4	2022-10-19
39	7RQA\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolution	X-ray diffraction	2.4	2022-01-26
40	7RQA\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolution	X-ray diffraction	2.4	2022-01-26
41	8CVL\|1\|1a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution	X-ray diffraction	2.3	2022-10-19
42	4W2F\|1\|CA	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
43	4Y4P\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
44	8CVJ\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-ray diffraction	2.4	2022-10-19
45	8CVL\|1\|2a	Small subunit ribosomal RNA	16S Ribosomal RNA	Thermus thermophilus HB8	Bacteria	RF00177	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution	X-ray diffraction	2.3	2022-10-19

Release history

Release	3.347	3.348	3.349	3.350	3.351	3.352	3.353	3.354	3.355	3.356	3.357	3.358	3.359	3.360
Date	2024-08-07	2024-08-14	2024-08-21	2024-08-28	2024-09-04	2024-09-11	2024-09-18	2024-09-25	2024-10-02	2024-10-09	2024-10-16	2024-10-23	2024-10-30	2024-11-06

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	Length
1	7RQA\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolution	X-RAY DIFFRACTION	2.4	1488
2	4Y4O\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-RAY DIFFRACTION	2.3	1488
3	8FC1\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.50A resolution	X-RAY DIFFRACTION	2.5	1488
4	8FC4\|1\|1a	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolution	X-RAY DIFFRACTION	2.45	1488
5	8FC6\|1\|1a	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolution	X-RAY DIFFRACTION	2.35	1488
6	8VTW\|1\|1a	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution	X-RAY DIFFRACTION	2.35	1521
7	7RQB\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution	X-RAY DIFFRACTION	2.45	1488
8	7RQC\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution	X-RAY DIFFRACTION	2.5	1488
9	7RQD\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolution	X-RAY DIFFRACTION	2.5	1488
10	7RQE\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolution	X-RAY DIFFRACTION	2.4	1488
11	8FC2\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolution	X-RAY DIFFRACTION	2.5	1488
12	4W2F\|1\|AA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	1497
13	4Y4P\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	1488
14	7RQ8\|1\|1a	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	1488
15	6XHW\|1\|1a	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	1488
16	8CVJ\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-RAY DIFFRACTION	2.4	1488
17	8CVK\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution	X-RAY DIFFRACTION	2.5	1488
18	8VTU\|1\|1a	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-RAY DIFFRACTION	2.4	1521
19	8G2A\|1\|1a	Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution	X-RAY DIFFRACTION	2.45	1488
20	8VTX\|1\|1a	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-RAY DIFFRACTION	2.4	1521
21	8CVL\|1\|1a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution	X-RAY DIFFRACTION	2.3	1488
22	6XHV\|1\|1a	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-RAY DIFFRACTION	2.4	1488
23	6XHV\|1\|2a	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-RAY DIFFRACTION	2.4	1491
24	8CVL\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution	X-RAY DIFFRACTION	2.3	1491
25	8VTX\|1\|2a	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with macrolone MCX-128, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-RAY DIFFRACTION	2.4	1521
26	8G2A\|1\|2a	Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution	X-RAY DIFFRACTION	2.45	1491
27	8VTU\|1\|2a	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-RAY DIFFRACTION	2.4	1521
28	8CVK\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution	X-RAY DIFFRACTION	2.5	1491
29	8CVJ\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution	X-RAY DIFFRACTION	2.4	1491
30	6XHW\|1\|2a	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	1491
31	4W2F\|1\|CA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	1503
32	4Y4P\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	1491
33	7RQ8\|1\|2a	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	1491
34	7RQA\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolution	X-RAY DIFFRACTION	2.4	1492
35	8FC1\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.50A resolution	X-RAY DIFFRACTION	2.5	1492
36	8FC4\|1\|2a	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolution	X-RAY DIFFRACTION	2.45	1492
37	8FC6\|1\|2a	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolution	X-RAY DIFFRACTION	2.35	1492
38	4Y4O\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-RAY DIFFRACTION	2.3	1492
39	8VTW\|1\|2a	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution	X-RAY DIFFRACTION	2.35	1521
40	7RQB\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution	X-RAY DIFFRACTION	2.45	1492
41	7RQE\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolution	X-RAY DIFFRACTION	2.4	1492
42	7RQD\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolution	X-RAY DIFFRACTION	2.5	1492
43	8FC2\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolution	X-RAY DIFFRACTION	2.5	1492
44	7RQC\|1\|2a	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution	X-RAY DIFFRACTION	2.5	1492
45	2VQE\|1\|A	Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding	X-RAY DIFFRACTION	2.5	1513

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_2.5_65795.78 Obsolete

Release history

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