Equivalence class NR_20.0_05063.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8UQL|1|7+ 8UQL|1|5+ 8UQL|1|6 (rep) | mRNA with 24 nt long spacer, NT DNA, T DNA | synthetic construct | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome | Electron microscopy | 3.2 | 104 | 2024-05-29 | |||
| 2 | 8UR0|1|7+ 8UR0|1|5+ 8UR0|1|6 | mRNA with 24 nt long spacer, NT DNA ops, T DNA ops | synthetic construct | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome | Electron microscopy | 3.4 | 107 | 2024-05-29 | |||
| 3 | 8UQP|1|7+ 8UQP|1|5+ 8UQP|1|6 | mRNA with 24 nt long spacer, NT DNA ops, T DNA ops | synthetic construct | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome | Electron microscopy | 3.8 | 107 | 2024-05-29 | |||
| 4 | 8UQM|1|7+ 8UQM|1|5+ 8UQM|1|6 | mRNA with 24 nt long spacer, NT DNA, T DNA | synthetic construct | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome | Electron microscopy | 5.3 | 104 | 2024-05-29 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 8UQL|1|7+ 8UQL|1|5+ 8UQL|1|6 | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome | ELECTRON MICROSCOPY | 3.2 | 104 | |
| 2 | 8UR0|1|7+ 8UR0|1|5+ 8UR0|1|6 | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome | ELECTRON MICROSCOPY | 3.4 | 107 | |
| 3 | 8UQP|1|7+ 8UQP|1|5+ 8UQP|1|6 | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome | ELECTRON MICROSCOPY | 3.8 | 107 | |
| 4 | 8UQM|1|7+ 8UQM|1|5+ 8UQM|1|6 | Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome | ELECTRON MICROSCOPY | 5.3 | 104 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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