Equivalence class NR_20.0_05326.2 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7KJT|1|A (rep) | Transfer RNA | RNA (70-MER) | Methanocaldococcus jannaschii | Archaea | RF00005 | KEOPS tRNA modifying sub-complex of archaeal Cgi121 and tRNA | X-ray diffraction | 3.34 | 70 | 2020-12-02 |
| 2 | 7KJU|1|A | Transfer RNA | RNA (75-MER) | Methanocaldococcus jannaschii | Archaea | RF00005 | Cgi121-tRNA complex | X-ray diffraction | 3.102 | 75 | 2020-12-02 |
| 3 | 8UP5|1|T | Transfer RNA | tRNA | Methanocaldococcus jannaschii | Archaea | RF00005 | Structure of the KEOPS complex (Cgi121/Bud32/Kae1/Pcc1) bound to tRNA in its native-like conformation. | Electron microscopy | 3.56 | 73 | 2024-12-18 |
| 4 | 9D85|1|T | Transfer RNA | tRNA | Methanocaldococcus jannaschii | Archaea | RF00005 | Structure of the KEOPS complex (Cgi121/Bud32/Kae1/Pcc1) bound to tRNA in a distorted tRNA conformation | Electron microscopy | 3.59 | 65 | 2024-12-18 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9D85|1|T | Structure of the KEOPS complex (Cgi121/Bud32/Kae1/Pcc1) bound to tRNA in a distorted tRNA conformation | ELECTRON MICROSCOPY | 3.59 | 65 | |
| 2 | 8UP5|1|T | Structure of the KEOPS complex (Cgi121/Bud32/Kae1/Pcc1) bound to tRNA in its native-like conformation. | ELECTRON MICROSCOPY | 3.56 | 73 | |
| 3 | 7KJU|1|A | Cgi121-tRNA complex | X-RAY DIFFRACTION | 3.102 | 75 | |
| 4 | 7KJT|1|A | KEOPS tRNA modifying sub-complex of archaeal Cgi121 and tRNA | X-RAY DIFFRACTION | 3.34 | 70 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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