Equivalence class NR_20.0_18489.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6ELZ|1|6 (rep) | Internal transcribed spacer 2 | Saccharomyces cerevisiae | State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes | Electron microscopy | 3.3 | 2017-12-27 | |||
| 2 | 6C0F|1|6 | ITS2 | Saccharomyces cerevisiae | Yeast nucleolar pre-60S ribosomal subunit (state 2) | Electron microscopy | 3.7 | 2018-03-14 | |||
| 3 | 3JCT|1|6 | ITS2-1 miscRNA | Saccharomyces cerevisiae | Cryo-em structure of eukaryotic pre-60S ribosomal subunits | Electron microscopy | 3.08 | 2016-06-01 | |||
| 4 | 6EM1|1|6 | 5.8S ribosomal RNA | Saccharomyces cerevisiae | State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | Electron microscopy | 3.6 | 2017-12-27 | |||
| 5 | 6CB1|1|6 | ITS2 | Saccharomyces cerevisiae | Yeast nucleolar pre-60S ribosomal subunit (state 3) | Electron microscopy | 4.6 | 2018-03-14 |
Parents
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 6CB1|1|6 | Yeast nucleolar pre-60S ribosomal subunit (state 3) | ELECTRON MICROSCOPY | 4.6 | 87 | |
| 2 | 6C0F|1|6 | Yeast nucleolar pre-60S ribosomal subunit (state 2) | ELECTRON MICROSCOPY | 3.7 | 87 | |
| 3 | 3JCT|1|6 | Cryo-em structure of eukaryotic pre-60S ribosomal subunits | ELECTRON MICROSCOPY | 3.08 | 65 | |
| 4 | 6EM1|1|6 | State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | ELECTRON MICROSCOPY | 3.6 | 65 | |
| 5 | 6ELZ|1|6 | State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes | ELECTRON MICROSCOPY | 3.3 | 65 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: