NR_20.0_21280.50

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	7O7Z\|1\|A2 (rep)	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)	Electron microscopy	2.4	1770	2021-06-02
2	8SCB\|1\|9	Small subunit ribosomal RNA	18S_rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Terminating ribosome with SRI-41315	Electron microscopy	2.5	1692	2023-12-27
3	9RHU\|1\|A1	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence	Electron microscopy	2.65	1770	2026-01-21
4	9YPZ\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Vacant ribosome with P-site tRNA, substate 1, Structure Ia	Electron microscopy	2.9	1697	2025-12-24
5	9YQ1\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Vacant ribosome with P-site tRNA, substate 3, Structure Ic	Electron microscopy	2.9	1697	2025-12-17
6	9YQ0\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Vacant ribosome with P-site tRNA, substate 2, Structure Ib	Electron microscopy	2.9	1697	2025-12-17
7	7JQB\|1\|A	Small subunit ribosomal RNA	rRNA	Oryctolagus cuniculus	Eukarya	RF01960	SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex	Electron microscopy	2.7	1697	2020-12-02
8	9YPY\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Ribosome with accommodated A-site tRNA, Structure V	Electron microscopy	3	1697	2025-12-24
9	9YPW\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	GTPBP1GDPPhe-tRNA*ribosome in the post-GTP hydrolysis state, Structure IV	Electron microscopy	2.9	1697	2025-12-31
10	7UCK\|1\|9	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	80S translation initiation complex with ac4c(-1) mRNA and Harringtonine	Electron microscopy	2.8	1698	2022-06-01
11	8VVQ\|1\|ZA	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets	Electron microscopy	2.7	1716	2025-07-30
12	9QQA\|1\|A2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Ternary complex of translating ribosome, NAC and NMT1	Electron microscopy	2.8	1770	2025-07-16
13	9H6Y\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Late-stage 48S Initiation Complex (LS48S IC) guided by the trans-RNA	Electron microscopy	2.9	1741	2025-12-10
14	9YPG\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	GTPBP1GCPPhe-tRNA*ribosome in the GTPase activation-like state, Structure III	Electron microscopy	3	1697	2025-12-31
15	9BDL\|1\|A18S	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	80S ribosome with angiogenin	Electron microscopy	2.8	1691	2024-07-24
16	8P03\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	48S late-stage initiation complex with m6A mRNA	Electron microscopy	3.04	1743	2024-03-20
17	9YPO\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	GTPBP1GCPPhe-tRNA*ribosome in the open state, Structure IIa	Electron microscopy	3	1697	2025-12-17
18	9YPS\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	GTPBP1GCPPhe-tRNA*ribosome in the open state, Structure IIb	Electron microscopy	3	1697	2025-12-17
19	9YPV\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	GTPBP1GCPPhe-tRNA*ribosome in the open state, Structure IId	Electron microscopy	3	1697	2025-12-17
20	7NWI\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S	Electron microscopy	3.13	1719	2021-07-07
21	8P2K\|1\|A2	Small subunit ribosomal RNA	18s rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Ternary complex of translating ribosome, NAC and METAP1	Electron microscopy	2.9	1770	2023-07-19
22	9YPT\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	GTPBP1GCPPhe-tRNA*ribosome in the open state, Structure IIc	Electron microscopy	3.1	1697	2025-12-17
23	9H74\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA	Electron microscopy	2.9	1741	2025-12-10
24	8VVP\|1\|ZA	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Codon sampling state obtained from Anisomycin-treated mammalian ribosomes	Electron microscopy	2.9	1716	2025-07-30
25	6W2T\|1\|a	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the closed state (Class 2)	Electron microscopy	3.36	1697	2020-04-22
26	9BDN\|1\|A18S	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	80S ribosome with angiogenin and tRNAAla	Electron microscopy	3.1	1691	2024-07-24
27	9F1B\|1\|A2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E	Electron microscopy	3.01	1770	2024-08-21
28	6P4H\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 2)	Electron microscopy	3.2	1697	2019-09-18
29	7ZJX\|1\|S2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome programmed with SECIS and SBP2	Electron microscopy	3.1	1770	2022-09-07
30	6P4G\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 1)	Electron microscopy	3.1	1697	2019-09-18
31	8P09\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	48S late-stage initiation complex with non methylated mRNA	Electron microscopy	3.3	1741	2024-03-20
32	7TOR\|1\|A18S	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	Electron microscopy	2.9	1691	2022-05-25
33	7O81\|1\|A2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot	Electron microscopy	3.1	1770	2021-06-02
34	7SYS\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the delta dII IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(delta dII).	Electron microscopy	3.5	1697	2022-07-27
35	6W2S\|1\|A	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the open state (Class 1)	Electron microscopy	3.47	1697	2020-04-22
36	9NDP\|1\|K	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC	Electron microscopy	2.82	1698	2025-09-10
37	6MTC\|1\|9	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)	Electron microscopy	3.4	1698	2018-11-21
38	6MTD\|1\|9	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)	Electron microscopy	3.3	1698	2018-11-21
39	7UCJ\|1\|9	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian 80S translation initiation complex with mRNA and Harringtonine	Electron microscopy	3.1	1698	2022-06-01
40	9MR4\|1\|K	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	NAC: Ribosome nascent chain complex(Oxa1L)	Electron microscopy	2.65	1691	2025-08-20
41	6P5I\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1)	Electron microscopy	3.1	1697	2019-09-18
42	9F1D\|1\|A2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK	Electron microscopy	3.26	1770	2024-08-21
43	6P5N\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1	Electron microscopy	3.2	1697	2019-09-25
44	7SYW\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt)	Electron microscopy	3.7	1697	2022-07-13
45	5LZV\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.	Electron microscopy	3.35	1698	2016-11-30
46	6MTE\|1\|9	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)	Electron microscopy	3.4	1698	2018-11-21
47	9QQB\|1\|A2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Quaternary complex of a translating ribosome, NAC, NMT1, and NatA	Electron microscopy	3.43	1770	2025-07-16
48	7JQC\|1\|A	Small subunit ribosomal RNA	rRNA	Oryctolagus cuniculus	Eukarya	RF01960	SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex	Electron microscopy	3.3	1697	2020-12-02
49	8BHF\|1\|A3	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4	Electron microscopy	3.1	1697	2023-09-06
50	6YAL\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian 48S late-stage initiation complex with beta-globin mRNA	Electron microscopy	3	1744	2020-04-08
51	6MTB\|1\|9	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)	Electron microscopy	3.6	1698	2018-11-21
52	6P5K\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3)	Electron microscopy	3.1	1697	2019-09-18
53	7SYQ\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the wt IRES and 40S ribosome ternary complex, open conformation. Structure 11(wt)	Electron microscopy	3.8	1680	2022-07-27
54	5LZZ\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)	Electron microscopy	3.47	1698	2016-11-30
55	6D90\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.	Electron microscopy	3.2	1697	2018-06-06
56	5LZS\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B	Electron microscopy	3.31	1697	2016-11-30
57	6YAN\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian 48S late-stage translation initiation complex with histone 4 mRNA	Electron microscopy	3.48	1744	2020-04-08
58	6ZVK\|1\|K3	Small subunit ribosomal RNA	18S RIBOSOMAL RNA	Oryctolagus cuniculus	Eukarya	RF01960	The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism	Electron microscopy	3.49	1869	2020-12-23
59	8VVR\|1\|ZA	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes	Electron microscopy	3.1	1716	2025-07-30
60	7NWG\|1\|A2	Small subunit ribosomal RNA	18S Ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.	Electron microscopy	3.8	1740	2021-07-07
61	6HCF\|1\|A1	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon	Electron microscopy	3.9	1732	2018-10-17
62	7SYR\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt).	Electron microscopy	3.6	1697	2022-07-27
63	9F1C\|1\|A2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E	Electron microscopy	3.78	1770	2024-08-21
64	8VVS\|1\|ZA	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes	Electron microscopy	3.1	1716	2025-07-30
65	7SYX\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII)	Electron microscopy	3.7	1697	2022-07-13
66	5LZW\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.	Electron microscopy	3.53	1698	2016-11-30
67	5LZT\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.	Electron microscopy	3.65	1698	2016-11-30
68	7SYN\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 8(delta dII)	Electron microscopy	4	1697	2022-07-13
69	6R5Q\|1\|K	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of XBP1u-paused ribosome nascent chain complex (post-state)	Electron microscopy	3	1698	2019-07-10
70	7MDZ\|1\|9	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	80S rabbit ribosome stalled with benzamide-CHX	Electron microscopy	3.2	1697	2021-09-01
71	7SYV\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the wt IRES eIF5B-containing pre-48S initiation complex, open conformation. Structure 14(wt)	Electron microscopy	3.9	1680	2022-07-20
72	6D9J\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.	Electron microscopy	3.2	1697	2018-06-06
73	9BDP\|1\|A18S	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla	Electron microscopy	3.7	1691	2024-07-24
74	3JAH\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon	Electron microscopy	3.45	1719	2015-08-12
75	8VVT\|1\|ZA	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian ribosomes bound to Anisomycin in the rotated conformation	Electron microscopy	2.9	1698	2025-07-30
76	6R6P\|1\|K	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of XBP1u-paused ribosome nascent chain complex (rotated state)	Electron microscopy	3.1	1698	2019-07-10
77	8VFT\|1\|9	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Translating 80S rabbit ribosome stalled by emetine with eEF2	Electron microscopy	3.3	1698	2024-12-25
78	6GZ5\|1\|B1	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)	Electron microscopy	3.5	1708	2018-12-05
79	6GZ4\|1\|B1	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)	Electron microscopy	3.6	1708	2018-12-05
80	7SYK\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 5(delta dII)	Electron microscopy	4.2	1697	2022-07-13
81	5LZU\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the mammalian ribosomal termination complex with accommodated eRF1	Electron microscopy	3.75	1698	2016-11-30
82	7SYP\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the wt IRES and 40S ribosome binary complex, open conformation. Structure 10(wt)	Electron microscopy	4	1680	2022-07-27
83	3JAG\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon	Electron microscopy	3.65	1719	2015-08-12
84	6P5J\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2)	Electron microscopy	3.1	1697	2019-09-18
85	7SYU\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII)	Electron microscopy	4.6	1697	2022-07-13
86	8SUP\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the 48S translation initiation complex assembled on the encephalomyocarditis virus IRES	Electron microscopy	3.1	1697	2026-03-18
87	7SYG\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 1(delta dII)	Electron microscopy	4.3	1697	2022-07-13
88	6GZ3\|1\|B1	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)	Electron microscopy	3.6	1708	2018-12-05
89	5LZY\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.	Electron microscopy	3.99	1698	2016-11-30
90	7TOQ\|1\|A18S	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR	Electron microscopy	3.1	1690	2022-05-25
91	6YAM\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA	Electron microscopy	3.6	1743	2020-04-08
92	3JAI\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon	Electron microscopy	3.65	1719	2015-08-12
93	7SYL\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the HCV IRES bound to the 40S ribosomal subunit, closed conformation. Structure 6(delta dII)	Electron microscopy	4.5	1697	2022-07-13
94	9C8K\|1\|1+ 9C8K\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA, RHDV Reinitiation stimulating element RNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome	Electron microscopy	3.1	1735	2025-02-19
95	8VVV\|1\|9	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian ribosomes bound to Anisomycin in the nonrotated conformation	Electron microscopy	3.1	1697	2025-07-30
96	7SYT\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the wt IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(wt)	Electron microscopy	4.4	1697	2022-07-13
97	6R6G\|1\|K	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of XBP1u-paused ribosome nascent chain complex with SRP.	Electron microscopy	3.7	1698	2019-07-10
98	9UZK\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	EMCV IRES captured on mammalian 40S with initiator tRNA	Electron microscopy	4.6	1744	2026-05-27
99	7SYM\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 7(delta dII)	Electron microscopy	4.8	1697	2022-07-13
100	7SYJ\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 4(delta dII)	Electron microscopy	4.8	1697	2022-07-13
101	7SYI\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 3(delta dII)	Electron microscopy	4.5	1697	2022-07-13
102	7NWH\|1\|9	Small subunit ribosomal RNA	18S Ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.	Electron microscopy	4.1	1698	2021-07-07
103	9UZM\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	40S ribosome without initiation factors	Electron microscopy	4.5	1744	2026-05-27
104	7SYO\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the HCV IRES bound to the 40S ribosomal subunit, head open. Structure 9(delta dII)	Electron microscopy	4.6	1697	2022-07-27
105	7A01\|1\|K3	Small subunit ribosomal RNA	18S RIBOSOMAL RNA	Oryctolagus cuniculus	Eukarya	RF01960	The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism	Electron microscopy	3.6	1801	2020-12-30
106	5FLX\|1\|1	Small subunit ribosomal RNA	18S RRNA	Oryctolagus cuniculus	Eukarya	RF01960	Mammalian 40S HCV-IRES complex	Electron microscopy	3.9	1708	2015-12-23
107	6HCJ\|1\|A2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs	Electron microscopy	3.8	1740	2018-10-17
108	9UZL\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	EMCV IRES captured on mammalian 40S ribosome with initiator tRNA and eIF2	Electron microscopy	5.01	1744	2026-05-27
109	6R7Q\|1\|K	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of XBP1u-paused ribosome nascent chain complex with Sec61.	Electron microscopy	3.9	1698	2019-07-10
110	7SYH\|1\|2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 2(delta dII)	Electron microscopy	4.6	1697	2022-07-13
111	9OGY\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Megrivirus E 3' internal ribosome entry site (IRES) RNA core region bound to rabbit ribosome	Electron microscopy	3.28	1680	2026-01-14
112	5K0Y\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face	Electron microscopy	5.8	1776	2016-07-13
113	5LZX\|1\|9	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.	Electron microscopy	3.67	1698	2016-11-30
114	8VVU\|1\|ZA	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA	Electron microscopy	3.8	1716	2025-07-30
115	6HCQ\|1\|A2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the rabbit collided di-ribosome (collided monosome)	Electron microscopy	6.5	1740	2018-10-17
116	9CPA\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of a Mammalian DHX29-bound 43S Pre-initiation Complex	Electron microscopy	6	1863	2025-07-23
117	6HCM\|1\|A1	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the rabbit collided di-ribosome (stalled monosome)	Electron microscopy	6.8	1732	2018-10-17
118	4KZY\|1\|i	Small subunit ribosomal RNA	18S Ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.	X-ray diffraction	7.01	1840	2013-07-24
119	4KZZ\|1\|i	Small subunit ribosomal RNA	18S Ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A	X-ray diffraction	7.03	1797	2013-07-24
120	4KZX\|1\|i	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 40S ribosomal subunit in complex with eIF1.	X-ray diffraction	7.81	1797	2013-07-24
121	4UJE\|1\|B1	Small subunit ribosomal RNA	18S Ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement	Electron microscopy	6.9	1742	2014-07-16
122	4D5L\|1\|1	Small subunit ribosomal RNA	18S RRNA 2	Oryctolagus cuniculus	Eukarya	RF01960	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state	Electron microscopy	9	1742	2015-02-04
123	4D61\|1\|1	Small subunit ribosomal RNA	18S RRNA	Oryctolagus cuniculus	Eukarya	RF01960	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state	Electron microscopy	9	1742	2015-03-04
124	4UJC\|1\|C1	Small subunit ribosomal RNA	18S RIBOSOMAL RNA	Oryctolagus cuniculus	Eukarya	RF01960	mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state	Electron microscopy	9.5	1742	2014-07-30
125	3JAJ\|1\|S2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the engaged state of the mammalian SRP-ribosome complex	Electron microscopy	3.75	1742	2015-08-05
126	4UJD\|1\|C1	Small subunit ribosomal RNA	18S Ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state	Electron microscopy	8.9	1742	2014-07-30
127	3JAN\|1\|S2	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the scanning state of the mammalian SRP-ribosome complex	Electron microscopy	3.75	1742	2015-08-05
128	7O7Y\|1\|A2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution)	Electron microscopy	2.2	1770	2021-06-02
129	7ZJW\|1\|S2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome as it decodes the Sec-UGA codon	Electron microscopy	2.8	1770	2022-10-19
130	7O80\|1\|A2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site	Electron microscopy	2.9	1770	2021-06-02
131	6SGC\|1\|A1	Small subunit ribosomal RNA	18S ribosomal RNA	Oryctolagus cuniculus	Eukarya	RF01960	Rabbit 80S ribosome stalled on a poly(A) tail	Electron microscopy	2.8	1697	2019-12-04
132	8BTK\|1\|A2	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Structure of the TRAP complex with the Sec translocon and a translating ribosome	Electron microscopy	3.5	1770	2023-05-24
133	7OYD\|1\|9	Small subunit ribosomal RNA	18S rRNA	Oryctolagus cuniculus	Eukarya	RF01960	Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b	Electron microscopy	2.3	1698	2022-07-20

Release history

Release	4.41
Date	2026-05-27

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	4UJD\|1\|C1	mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state	ELECTRON MICROSCOPY	8.9	1742
2	4UJC\|1\|C1	mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state	ELECTRON MICROSCOPY	9.5	1742
3	4D61\|1\|1	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state	ELECTRON MICROSCOPY	9	1742
4	4D5L\|1\|1	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state	ELECTRON MICROSCOPY	9	1742
5	4UJE\|1\|B1	Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement	ELECTRON MICROSCOPY	6.9	1742
6	5K0Y\|1\|A	m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face	ELECTRON MICROSCOPY	5.8	1776
7	4KZX\|1\|i	Rabbit 40S ribosomal subunit in complex with eIF1.	X-RAY DIFFRACTION	7.81	1797
8	4KZY\|1\|i	Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.	X-RAY DIFFRACTION	7.01	1840
9	4KZZ\|1\|i	Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A	X-RAY DIFFRACTION	7.03	1797
10	3JAJ\|1\|S2	Structure of the engaged state of the mammalian SRP-ribosome complex	ELECTRON MICROSCOPY	3.75	1742
11	3JAN\|1\|S2	Structure of the scanning state of the mammalian SRP-ribosome complex	ELECTRON MICROSCOPY	3.75	1742
12	3JAH\|1\|9	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon	ELECTRON MICROSCOPY	3.45	1719
13	3JAG\|1\|9	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codon	ELECTRON MICROSCOPY	3.65	1719
14	3JAI\|1\|9	Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon	ELECTRON MICROSCOPY	3.65	1719
15	8SCB\|1\|9	Terminating ribosome with SRI-41315	ELECTRON MICROSCOPY	2.5	1692
16	6ZVK\|1\|K3	The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism	ELECTRON MICROSCOPY	3.49	1869
17	7A01\|1\|K3	The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism	ELECTRON MICROSCOPY	3.6	1801
18	9UZM\|1\|2	40S ribosome without initiation factors	ELECTRON MICROSCOPY	4.5	1744
19	9CPA\|1\|2	Structure of a Mammalian DHX29-bound 43S Pre-initiation Complex	ELECTRON MICROSCOPY	6	1863
20	8P03\|1\|2	48S late-stage initiation complex with m6A mRNA	ELECTRON MICROSCOPY	3.04	1743
21	8P09\|1\|2	48S late-stage initiation complex with non methylated mRNA	ELECTRON MICROSCOPY	3.3	1741
22	6YAM\|1\|2	Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA	ELECTRON MICROSCOPY	3.6	1743
23	6YAL\|1\|2	Mammalian 48S late-stage initiation complex with beta-globin mRNA	ELECTRON MICROSCOPY	3	1744
24	9UZK\|1\|2	EMCV IRES captured on mammalian 40S with initiator tRNA	ELECTRON MICROSCOPY	4.6	1744
25	9UZL\|1\|2	EMCV IRES captured on mammalian 40S ribosome with initiator tRNA and eIF2	ELECTRON MICROSCOPY	5.01	1744
26	6YAN\|1\|2	Mammalian 48S late-stage translation initiation complex with histone 4 mRNA	ELECTRON MICROSCOPY	3.48	1744
27	9H74\|1\|2	Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA	ELECTRON MICROSCOPY	2.9	1741
28	9H6Y\|1\|2	Late-stage 48S Initiation Complex (LS48S IC) guided by the trans-RNA	ELECTRON MICROSCOPY	2.9	1741
29	7NWI\|1\|9	Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S	ELECTRON MICROSCOPY	3.13	1719
30	7NWH\|1\|9	Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.	ELECTRON MICROSCOPY	4.1	1698
31	7NWG\|1\|A2	Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.	ELECTRON MICROSCOPY	3.8	1740
32	6HCJ\|1\|A2	Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs	ELECTRON MICROSCOPY	3.8	1740
33	6HCQ\|1\|A2	Structure of the rabbit collided di-ribosome (collided monosome)	ELECTRON MICROSCOPY	6.5	1740
34	6HCM\|1\|A1	Structure of the rabbit collided di-ribosome (stalled monosome)	ELECTRON MICROSCOPY	6.8	1732
35	6HCF\|1\|A1	Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon	ELECTRON MICROSCOPY	3.9	1732
36	6D90\|1\|2	Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.	ELECTRON MICROSCOPY	3.2	1697
37	7SYU\|1\|2	Structure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII)	ELECTRON MICROSCOPY	4.6	1697
38	7SYT\|1\|2	Structure of the wt IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(wt)	ELECTRON MICROSCOPY	4.4	1697
39	7SYS\|1\|2	Structure of the delta dII IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(delta dII).	ELECTRON MICROSCOPY	3.5	1697
40	7SYR\|1\|2	Structure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt).	ELECTRON MICROSCOPY	3.6	1697
41	7SYW\|1\|2	Structure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt)	ELECTRON MICROSCOPY	3.7	1697
42	7SYX\|1\|2	Structure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII)	ELECTRON MICROSCOPY	3.7	1697
43	6P5N\|1\|2	Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1	ELECTRON MICROSCOPY	3.2	1697
44	9YQ0\|1\|9	Vacant ribosome with P-site tRNA, substate 2, Structure Ib	ELECTRON MICROSCOPY	2.9	1697
45	9YPZ\|1\|9	Vacant ribosome with P-site tRNA, substate 1, Structure Ia	ELECTRON MICROSCOPY	2.9	1697
46	9YQ1\|1\|9	Vacant ribosome with P-site tRNA, substate 3, Structure Ic	ELECTRON MICROSCOPY	2.9	1697
47	7MDZ\|1\|9	80S rabbit ribosome stalled with benzamide-CHX	ELECTRON MICROSCOPY	3.2	1697
48	6SGC\|1\|A1	Rabbit 80S ribosome stalled on a poly(A) tail	ELECTRON MICROSCOPY	2.8	1697
49	5LZY\|1\|9	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.	ELECTRON MICROSCOPY	3.99	1698
50	5LZZ\|1\|9	Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)	ELECTRON MICROSCOPY	3.47	1698
51	5LZX\|1\|9	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.	ELECTRON MICROSCOPY	3.67	1698
52	5LZW\|1\|9	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.	ELECTRON MICROSCOPY	3.53	1698
53	5LZU\|1\|9	Structure of the mammalian ribosomal termination complex with accommodated eRF1	ELECTRON MICROSCOPY	3.75	1698
54	5LZV\|1\|9	Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.	ELECTRON MICROSCOPY	3.35	1698
55	5LZT\|1\|9	Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.	ELECTRON MICROSCOPY	3.65	1698
56	5LZS\|1\|9	Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B	ELECTRON MICROSCOPY	3.31	1697
57	9YPY\|1\|9	Ribosome with accommodated A-site tRNA, Structure V	ELECTRON MICROSCOPY	3	1697
58	9YPG\|1\|9	GTPBP1GCPPhe-tRNA*ribosome in the GTPase activation-like state, Structure III	ELECTRON MICROSCOPY	3	1697
59	9YPO\|1\|9	GTPBP1GCPPhe-tRNA*ribosome in the open state, Structure IIa	ELECTRON MICROSCOPY	3	1697
60	9YPS\|1\|9	GTPBP1GCPPhe-tRNA*ribosome in the open state, Structure IIb	ELECTRON MICROSCOPY	3	1697
61	9YPW\|1\|9	GTPBP1GDPPhe-tRNA*ribosome in the post-GTP hydrolysis state, Structure IV	ELECTRON MICROSCOPY	2.9	1697
62	9YPT\|1\|9	GTPBP1GCPPhe-tRNA*ribosome in the open state, Structure IIc	ELECTRON MICROSCOPY	3.1	1697
63	9YPV\|1\|9	GTPBP1GCPPhe-tRNA*ribosome in the open state, Structure IId	ELECTRON MICROSCOPY	3	1697
64	9BDN\|1\|A18S	80S ribosome with angiogenin and tRNAAla	ELECTRON MICROSCOPY	3.1	1691
65	9BDL\|1\|A18S	80S ribosome with angiogenin	ELECTRON MICROSCOPY	2.8	1691
66	9BDP\|1\|A18S	80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla	ELECTRON MICROSCOPY	3.7	1691
67	7TOR\|1\|A18S	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	ELECTRON MICROSCOPY	2.9	1691
68	8BHF\|1\|A3	Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4	ELECTRON MICROSCOPY	3.1	1697
69	6MTB\|1\|9	Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)	ELECTRON MICROSCOPY	3.6	1698
70	6MTC\|1\|9	Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)	ELECTRON MICROSCOPY	3.4	1698
71	6R7Q\|1\|K	Structure of XBP1u-paused ribosome nascent chain complex with Sec61.	ELECTRON MICROSCOPY	3.9	1698
72	6R5Q\|1\|K	Structure of XBP1u-paused ribosome nascent chain complex (post-state)	ELECTRON MICROSCOPY	3	1698
73	6R6G\|1\|K	Structure of XBP1u-paused ribosome nascent chain complex with SRP.	ELECTRON MICROSCOPY	3.7	1698
74	9NDP\|1\|K	Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC	ELECTRON MICROSCOPY	2.82	1698
75	9MR4\|1\|K	NAC: Ribosome nascent chain complex(Oxa1L)	ELECTRON MICROSCOPY	2.65	1691
76	7UCJ\|1\|9	Mammalian 80S translation initiation complex with mRNA and Harringtonine	ELECTRON MICROSCOPY	3.1	1698
77	7UCK\|1\|9	80S translation initiation complex with ac4c(-1) mRNA and Harringtonine	ELECTRON MICROSCOPY	2.8	1698
78	7TOQ\|1\|A18S	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR	ELECTRON MICROSCOPY	3.1	1690
79	6R6P\|1\|K	Structure of XBP1u-paused ribosome nascent chain complex (rotated state)	ELECTRON MICROSCOPY	3.1	1698
80	8VVU\|1\|ZA	Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA	ELECTRON MICROSCOPY	3.8	1716
81	8VVR\|1\|ZA	Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes	ELECTRON MICROSCOPY	3.1	1716
82	8VVS\|1\|ZA	Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes	ELECTRON MICROSCOPY	3.1	1716
83	8VVP\|1\|ZA	Codon sampling state obtained from Anisomycin-treated mammalian ribosomes	ELECTRON MICROSCOPY	2.9	1716
84	8VVQ\|1\|ZA	Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets	ELECTRON MICROSCOPY	2.7	1716
85	9RHU\|1\|A1	Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence	ELECTRON MICROSCOPY	2.65	1770
86	7O80\|1\|A2	Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site	ELECTRON MICROSCOPY	2.9	1770
87	7O7Z\|1\|A2	Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)	ELECTRON MICROSCOPY	2.4	1770
88	7O7Y\|1\|A2	Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution)	ELECTRON MICROSCOPY	2.2	1770
89	8BTK\|1\|A2	Structure of the TRAP complex with the Sec translocon and a translating ribosome	ELECTRON MICROSCOPY	3.5	1770
90	8P2K\|1\|A2	Ternary complex of translating ribosome, NAC and METAP1	ELECTRON MICROSCOPY	2.9	1770
91	9F1B\|1\|A2	Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E	ELECTRON MICROSCOPY	3.01	1770
92	9F1D\|1\|A2	Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK	ELECTRON MICROSCOPY	3.26	1770
93	9F1C\|1\|A2	Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E	ELECTRON MICROSCOPY	3.78	1770
94	9QQB\|1\|A2	Quaternary complex of a translating ribosome, NAC, NMT1, and NatA	ELECTRON MICROSCOPY	3.43	1770
95	9QQA\|1\|A2	Ternary complex of translating ribosome, NAC and NMT1	ELECTRON MICROSCOPY	2.8	1770
96	7ZJW\|1\|S2	Rabbit 80S ribosome as it decodes the Sec-UGA codon	ELECTRON MICROSCOPY	2.8	1770
97	7O81\|1\|A2	Rabbit 80S ribosome colliding in another ribosome stalled by the SARS-CoV-2 pseudoknot	ELECTRON MICROSCOPY	3.1	1770
98	8SUP\|1\|2	Structure of the 48S translation initiation complex assembled on the encephalomyocarditis virus IRES	ELECTRON MICROSCOPY	3.1	1697
99	6GZ5\|1\|B1	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)	ELECTRON MICROSCOPY	3.5	1708
100	7JQB\|1\|A	SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex	ELECTRON MICROSCOPY	2.7	1697
101	7JQC\|1\|A	SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex	ELECTRON MICROSCOPY	3.3	1697
102	7SYI\|1\|2	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 3(delta dII)	ELECTRON MICROSCOPY	4.5	1697
103	7SYH\|1\|2	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 2(delta dII)	ELECTRON MICROSCOPY	4.6	1697
104	7SYJ\|1\|2	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 4(delta dII)	ELECTRON MICROSCOPY	4.8	1697
105	7SYG\|1\|2	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 1(delta dII)	ELECTRON MICROSCOPY	4.3	1697
106	7SYK\|1\|2	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 5(delta dII)	ELECTRON MICROSCOPY	4.2	1697
107	7SYL\|1\|2	Structure of the HCV IRES bound to the 40S ribosomal subunit, closed conformation. Structure 6(delta dII)	ELECTRON MICROSCOPY	4.5	1697
108	7ZJX\|1\|S2	Rabbit 80S ribosome programmed with SECIS and SBP2	ELECTRON MICROSCOPY	3.1	1770
109	6P4H\|1\|2	Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 2)	ELECTRON MICROSCOPY	3.2	1697
110	6P4G\|1\|2	Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 1)	ELECTRON MICROSCOPY	3.1	1697
111	6P5K\|1\|2	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3)	ELECTRON MICROSCOPY	3.1	1697
112	6P5I\|1\|2	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1)	ELECTRON MICROSCOPY	3.1	1697
113	6P5J\|1\|2	Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2)	ELECTRON MICROSCOPY	3.1	1697
114	7OYD\|1\|9	Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b	ELECTRON MICROSCOPY	2.3	1698
115	6MTE\|1\|9	Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)	ELECTRON MICROSCOPY	3.4	1698
116	8VVT\|1\|ZA	Mammalian ribosomes bound to Anisomycin in the rotated conformation	ELECTRON MICROSCOPY	2.9	1698
117	8VFT\|1\|9	Translating 80S rabbit ribosome stalled by emetine with eEF2	ELECTRON MICROSCOPY	3.3	1698
118	6MTD\|1\|9	Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)	ELECTRON MICROSCOPY	3.3	1698
119	8VVV\|1\|9	Mammalian ribosomes bound to Anisomycin in the nonrotated conformation	ELECTRON MICROSCOPY	3.1	1697
120	6D9J\|1\|2	Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.	ELECTRON MICROSCOPY	3.2	1697
121	6W2S\|1\|A	Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the open state (Class 1)	ELECTRON MICROSCOPY	3.47	1697
122	7SYM\|1\|2	Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 7(delta dII)	ELECTRON MICROSCOPY	4.8	1697
123	7SYN\|1\|2	Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 8(delta dII)	ELECTRON MICROSCOPY	4	1697
124	9OGY\|1\|2	Megrivirus E 3' internal ribosome entry site (IRES) RNA core region bound to rabbit ribosome	ELECTRON MICROSCOPY	3.28	1680
125	7SYP\|1\|2	Structure of the wt IRES and 40S ribosome binary complex, open conformation. Structure 10(wt)	ELECTRON MICROSCOPY	4	1680
126	7SYQ\|1\|2	Structure of the wt IRES and 40S ribosome ternary complex, open conformation. Structure 11(wt)	ELECTRON MICROSCOPY	3.8	1680
127	7SYV\|1\|2	Structure of the wt IRES eIF5B-containing pre-48S initiation complex, open conformation. Structure 14(wt)	ELECTRON MICROSCOPY	3.9	1680
128	7SYO\|1\|2	Structure of the HCV IRES bound to the 40S ribosomal subunit, head open. Structure 9(delta dII)	ELECTRON MICROSCOPY	4.6	1697
129	6W2T\|1\|a	Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the closed state (Class 2)	ELECTRON MICROSCOPY	3.36	1697
130	9C8K\|1\|1+ 9C8K\|1\|2	Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome	ELECTRON MICROSCOPY	3.1	1735
131	5FLX\|1\|1	Mammalian 40S HCV-IRES complex	ELECTRON MICROSCOPY	3.9	1708
132	6GZ3\|1\|B1	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)	ELECTRON MICROSCOPY	3.6	1708
133	6GZ4\|1\|B1	tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)	ELECTRON MICROSCOPY	3.6	1708

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_20.0_21280.50 Current

Release history

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