Equivalence class NR_20.0_29032.3 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7B3D|1|T+ 7B3D|1|P (rep) | RNA (5'-R(P*CP*UP*AP*CP*GP*CP*AP*GP*UP*G)-3'), RNA (5'-R(P*UP*GP*CP*AP*CP*UP*GP*CP*GP*UP*AP*G)-3') | Severe acute respiratory syndrome coronavirus 2 | Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with AMP at position -4 (structure 3) | Electron microscopy | 2.8 | 22 | 2020-12-23 | |||
| 2 | 7B3B|1|T+ 7B3B|1|P | DNA/RNA (5'-R(P*CP*UP*AP*CP*GP*CP*G)-D(P*(RMP))-R(P*UP*G)-3'), RNA (5'-R(P*UP*GP*CP*AP*UP*CP*GP*CP*GP*UP*AP*G)-3') | Severe acute respiratory syndrome coronavirus 2 | Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with Remdesivir at position -3 (structure 1) | Electron microscopy | 3.1 | 22 | 2020-12-23 | |||
| 3 | 7OYG|1|H+ 7OYG|1|G | RNA (5'-R(P*CP*UP*AP*CP*GP*CP*AP*GP*UP*G)-3'), RNA (5'-R(P*UP*GP*CP*AP*CP*UP*GP*CP*GP*UP*AP*G)-3') | Severe acute respiratory syndrome coronavirus 2 | Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase | Electron microscopy | 5.5 | 22 | 2021-08-25 | |||
| 4 | 7OYG|1|T+ 7OYG|1|P | RNA (5'-R(P*CP*UP*AP*CP*GP*CP*AP*GP*UP*G)-3'), RNA (5'-R(P*UP*GP*CP*AP*CP*UP*GP*CP*GP*UP*AP*G)-3') | Severe acute respiratory syndrome coronavirus 2 | Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase | Electron microscopy | 5.5 | 22 | 2021-08-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 7OYG|1|T+ 7OYG|1|P | Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase | ELECTRON MICROSCOPY | 5.5 | 22 | |
| 2 | 7B3D|1|T+ 7B3D|1|P | Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with AMP at position -4 (structure 3) | ELECTRON MICROSCOPY | 2.8 | 22 | |
| 3 | 7OYG|1|H+ 7OYG|1|G | Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase | ELECTRON MICROSCOPY | 5.5 | 22 | |
| 4 | 7B3B|1|T+ 7B3B|1|P | Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with Remdesivir at position -3 (structure 1) | ELECTRON MICROSCOPY | 3.1 | 22 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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