Equivalence class NR_20.0_30486.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8FVY|1|g (rep) | Transfer RNA | tRNA | Giardia intestinalis assemblage A | Eukarya | RF00005 | 40S subunit of the Giardia lamblia 80S ribosome | Electron microscopy | 2.94 | 2024-01-24 |
| 2 | 8G4S|1|g | Transfer RNA | E-site tRNA | Giardia intestinalis assemblage A | Eukarya | RF00005 | 40S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs. | Electron microscopy | 3.14 | 2024-01-31 |
| 3 | 6OKK|1|g | Transfer RNA | E-site tRNA | Plasmodium falciparum | Eukarya | RF00005 | Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit | Electron microscopy | 3.3 | 2019-05-22 |
| 4 | 3J7A|1|7 | Transfer RNA | tRNA | Plasmodium falciparum | Eukarya | RF00005 | Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit | Electron microscopy | 3.2 | 2014-07-16 |
| 5 | 3JBP|1|7 | Transfer RNA | E-tRNA | Plasmodium falciparum | Eukarya | RF00005 | Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA | Electron microscopy | 6.7 | 2015-10-14 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 8G4S|1|g | 40S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs. | ELECTRON MICROSCOPY | 3.14 | 74 | |
| 2 | 8FVY|1|g | 40S subunit of the Giardia lamblia 80S ribosome | ELECTRON MICROSCOPY | 2.94 | 74 | |
| 3 | 3J7A|1|7 | Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit | ELECTRON MICROSCOPY | 3.2 | 74 | |
| 4 | 6OKK|1|g | Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit | ELECTRON MICROSCOPY | 3.3 | 74 | |
| 5 | 3JBP|1|7 | Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA | ELECTRON MICROSCOPY | 6.7 | 74 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: