Equivalence class NR_20.0_34961.4 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6N7R|1|R (rep) | U1 spliceosomal RNA | ACT1 pre-mRNA, U1 snRNA | Saccharomyces cerevisiae | Eukarya | RF00488 | Saccharomyces cerevisiae spliceosomal E complex (ACT1) | Electron microscopy | 3.2 | 2019-09-18 |
| 2 | 6N7P|1|R | U1 spliceosomal RNA | U1 snRNA, UBC4 pre-mRNA | Saccharomyces cerevisiae | Eukarya | RF00488 | S. cerevisiae spliceosomal E complex (UBC4) | Electron microscopy | 3.6 | 2019-09-18 |
| 3 | 7OQC|1|1 | U1 spliceosomal RNA | ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A),ACT1 pre-mRNA (delta BS-A), U1 snRNA | Saccharomyces cerevisiae | Eukarya | RF00488 | The U1 part of Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1) | Electron microscopy | 4.1 | 2021-08-11 |
| 4 | 5ZWN|1|P | U1 spliceosomal RNA | pre-mRNA, U1 snRNA | Saccharomyces cerevisiae | Eukarya | RF00488 | Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.3 angstrom (Part II: U1 snRNP region) | Electron microscopy | 3.4 | 2018-08-29 |
| 5 | 8W2O|1|R | U1 spliceosomal RNA | U1 snRNA | Saccharomyces cerevisiae S288C | Eukarya | RF00488 | Yeast U1 snRNP with humanized U1C Zinc-Finger domain | Electron microscopy | 3.49 | 2024-05-15 |
| 6 | 6N7X|1|R | U1 spliceosomal RNA | U1 snRNA | Saccharomyces cerevisiae | Eukarya | RF00488 | S. cerevisiae U1 snRNP | Electron microscopy | 3.6 | 2019-07-24 |
| 7 | 7OQE|1|1 | U1 spliceosomal RNA | ACT1 pre-mRNA (delta BS-A), U1 snRNA | Saccharomyces cerevisiae | Eukarya | RF00488 | Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1) | Electron microscopy | 5.9 | 2021-08-11 |
Release history
| Release | 3.335 | 3.336 | 3.337 | 3.338 | 3.339 | 3.340 | 3.341 | 3.342 | 3.343 | 3.344 | 3.345 | 3.346 | 3.347 | 3.348 | 3.349 | 3.350 | 3.351 | 3.352 | 3.353 | 3.354 | 3.355 | 3.356 | 3.357 | 3.358 | 3.359 | 3.360 | 3.361 | 3.362 | 3.363 | 3.364 | 3.365 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-05-15 | 2024-05-22 | 2024-05-29 | 2024-06-05 | 2024-06-12 | 2024-06-19 | 2024-06-26 | 2024-07-03 | 2024-07-10 | 2024-07-17 | 2024-07-25 | 2024-07-31 | 2024-08-07 | 2024-08-14 | 2024-08-21 | 2024-08-28 | 2024-09-04 | 2024-09-11 | 2024-09-18 | 2024-09-25 | 2024-10-02 | 2024-10-09 | 2024-10-16 | 2024-10-23 | 2024-10-30 | 2024-11-06 | 2024-11-13 | 2024-11-20 | 2024-11-27 | 2024-12-04 | 2024-12-11 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 7OQE|1|1 | Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1) | ELECTRON MICROSCOPY | 5.9 | 558 | |
| 2 | 7OQC|1|1 | The U1 part of Saccharomyces cerevisiae spliceosomal pre-A complex (delta BS-A ACT1) | ELECTRON MICROSCOPY | 4.1 | 558 | |
| 3 | 6N7P|1|R | S. cerevisiae spliceosomal E complex (UBC4) | ELECTRON MICROSCOPY | 3.6 | 558 | |
| 4 | 8W2O|1|R | Yeast U1 snRNP with humanized U1C Zinc-Finger domain | ELECTRON MICROSCOPY | 3.49 | 327 | |
| 5 | 6N7R|1|R | Saccharomyces cerevisiae spliceosomal E complex (ACT1) | ELECTRON MICROSCOPY | 3.2 | 558 | |
| 6 | 6N7X|1|R | S. cerevisiae U1 snRNP | ELECTRON MICROSCOPY | 3.6 | 308 | |
| 7 | 5ZWN|1|P | Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.3 angstrom (Part II: U1 snRNP region) | ELECTRON MICROSCOPY | 3.4 | 480 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: