RNA 3D Hub //

Equivalence class NR_20.0_35542.68 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
15L4O|1|A (rep)Transfer RNAtRNA (76-MER)Escherichia coliBacteriaRF00005Structure of an E.coli initiator tRNAfMet A1-U72 variantX-ray diffraction2.8762017-03-01
25HCQ|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
34V6G|1|CCTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.5772014-07-09
44WQ1|1|2KTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.1772015-06-10
55IBB|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.96772016-05-25
66CAE|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-04-18
74WQR|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.15772015-06-10
85HCQ|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
94V5F|1|CVTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.6772014-07-09
105IB7|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.99772016-05-25
114V8D|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction3772014-07-09
125HCR|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
134Z8C|1|1xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.9762015-05-20
145J4B|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762016-04-27
154WQ1|1|2LTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.1772015-06-10
165EL7|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.15772016-01-27
174WSD|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.95772015-06-10
184V8D|1|ACTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction3772014-07-09
195IBB|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.96762016-05-25
205J4B|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762016-04-27
214Z8C|1|2xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.9762015-05-20
224WSD|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.95772015-06-10
236CAE|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-04-18
244WT1|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.05772015-06-10
254WQR|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.15772015-06-10
265J4C|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8762016-04-27
274WPO|1|BXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.8762015-01-28
285W4K|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762017-08-30
294V6G|1|ACTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.5772014-07-09
301VY4|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.6762014-08-20
316OF1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-ray diffraction2.8762019-04-17
325DFE|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.1772016-10-12
336QNQ|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.5772019-06-19
344W2H|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.7762014-10-15
355HCR|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-04-06
365EL7|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.15772016-01-27
374LNT|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.94772014-08-06
385HD1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.7762016-04-06
395HCP|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.89762016-04-06
406OF1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-ray diffraction2.8762019-04-17
415HAU|1|1wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3762016-04-06
425J4C|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.8762016-04-27
434W2I|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.7762014-10-15
445WIS|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762018-02-14
455IB7|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.99772016-05-25
465EL6|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.1772016-01-27
474WT1|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.05772015-06-10
485IB8|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-ray diffraction3.13772016-05-25
494W2G|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.55762014-10-15
504LNT|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.94772014-08-06
516ND5|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.6762019-03-20
524V7M|1|AXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.45772014-07-09
534W2H|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.7762014-10-15
544YZV|1|XVTransfer RNAmessenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.1772015-10-21
555W4K|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762017-08-30
564V5F|1|AVTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.6772014-07-09
575DFE|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.1772016-10-12
584WRA|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.05772015-06-10
594WRA|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.05772015-06-10
605EL6|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.1772016-01-27
615HAU|1|2wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3762016-04-06
625E7K|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.2772016-01-27
634V9S|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.1762014-07-09
645IB8|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-ray diffraction3.13772016-05-25
654Y4P|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.5762015-03-18
664W2G|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.55762014-10-15
674WR6|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.05772015-06-10
686O97|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-ray diffraction2.75762019-04-17
694WR6|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.05772015-06-10
703CW5|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.1772008-09-02
715EL4|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.15772016-01-27
725HCP|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.89762016-04-06
734W4G|1|XVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.3772015-10-21
745DOY|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.6762015-12-30
754ZER|1|1xTransfer RNAmRNA, tRNA metEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.1762015-05-20
765WIT|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-02-14
775EL5|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.15772016-01-27
786QNQ|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.5772019-06-19
795HD1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.7762016-04-06
804V9S|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.1762014-07-09
814W2I|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.7762014-10-15
826ND5|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.6762019-03-20
835E7K|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.2772016-01-27
841VY7|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.8762014-08-20
854Z3S|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.65762015-06-03
864YZV|1|QVTransfer RNAmessenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.1772015-10-21
871VY4|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.6762014-08-20
884W2F|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.4762014-10-15
894V8Q|1|BVTransfer RNAE-SITE or P-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.1772014-07-09
901VY5|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.55762014-08-20
914V51|1|CVTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.8772014-07-09
924WPO|1|DXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.8762015-01-28
934ZSN|1|XVTransfer RNAmessenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF0000570S-wild-type HigB toxin complex bound to a AAA lysine codonX-ray diffraction3.6772016-09-07
944YPB|1|XVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.4772015-10-21
954W4G|1|QVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.3772015-10-21
964V9R|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction3762014-07-09
974V9R|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction3762014-07-09
984WZO|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.3772015-06-10
995EL4|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.15762016-01-27
1004W2F|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.4762014-10-15
1015WIS|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.7762018-02-14
1024V8E|1|DCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.3772014-07-09
1034WRO|1|2KTransfer RNARNA (30-MER), tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.05772015-06-10
1044V51|1|AVTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.8772014-07-09
1054V5C|1|AVTransfer RNAMRNA, P-SITE TRNA FMETEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.3772014-07-09
1066ND6|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.85762019-02-20
1076O97|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-ray diffraction2.75762019-04-17
1084Y4P|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.5762015-03-18
1091VY6|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.9762014-08-20
1104Z3S|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.65762015-06-03
1114ZER|1|2xTransfer RNAmRNA, tRNA metEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.1762015-05-20
1126UO1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.95762019-11-27
1136UO1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.95762019-11-27
1144ZSN|1|QVTransfer RNAmessenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF0000570S-wild-type HigB toxin complex bound to a AAA lysine codonX-ray diffraction3.6772016-09-07
1151VY6|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.9762014-08-20
1164WQY|1|BXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.8762015-01-28
1175DOY|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.6762015-12-30
1184V8F|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.3772014-07-09
1194WRO|1|2LTransfer RNARNA (30-MER), tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.05772015-06-10
1205WIT|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6762018-02-14
1214V5C|1|CVTransfer RNAMRNA, P-SITE TRNA FMETEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.3772014-07-09
1225F8K|1|1xTransfer RNAmRNA, tRNAiMetEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-02-03
1234V87|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.1772014-07-09
1244WZO|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.3772015-06-10
1254TUC|1|QVTransfer RNAA-site ASL-SufJ, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.6772015-05-13
1266ND6|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.85762019-02-20
1274YPB|1|QVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.4772015-10-21
1281VY5|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.55762014-08-20
1294V8B|1|ACTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
1304P6F|1|XVTransfer RNAE-Site tRNA-Phe or A-Site tRNA-Phe, mRNA, tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.6772014-10-01
1314LT8|1|XVTransfer RNAA-site ASL Pro, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.14772014-08-06
1324V87|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.1772014-07-09
1334V8C|1|DCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.3772014-07-09
1344TUC|1|XVTransfer RNAA-site ASL-SufJ, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.6772015-05-13
1354V7M|1|CXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), RNA (77-MER)Escherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.45772014-07-09
1364V8E|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.3772014-07-09
1375EL5|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.15772016-01-27
1384V5F|1|AWTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.6772014-07-09
1394V5F|1|CWTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.6772014-07-09
1404TUA|1|XVTransfer RNAA-site ASL-Thr, messenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.6772015-05-13
1414V9I|1|AVTransfer RNAmRNA, P-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.3772014-07-09
1424TUA|1|QVTransfer RNAA-site ASL-Thr, messenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.6772015-05-13
1436GSK|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-ray diffraction3.36772018-07-04
1444V67|1|AYTransfer RNAMRNA, P AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
1454TUB|1|XVTransfer RNAA-site tRNA Thr, messenger RNA, P-site tRNA f-MetEscherichia coliBacteriaRF00005Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.6772015-05-13
1464V7L|1|CXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction3772014-07-09
1476N9E|1|1xTransfer RNAmRNA, P-site tRNA, Deacylated Initiator Methionyl-tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolutionX-ray diffraction3.7762018-12-12
1484V7P|1|DWTransfer RNAmessenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3'), P-site tRNA-fMetEscherichia coliBacteriaRF00005Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.62772014-07-09
1494V8B|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
1504TUB|1|QVTransfer RNAA-site tRNA Thr, messenger RNA, P-site tRNA f-MetEscherichia coliBacteriaRF00005Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.6772015-05-13
1514V7L|1|AXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction3772014-07-09
1524TUD|1|QVTransfer RNAA-site ASL-SufJ, messenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.6772015-05-13
1534LT8|1|QVTransfer RNAA-site ASL Pro, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.14772014-08-06
1544P6F|1|QVTransfer RNAE-Site tRNA-Phe or A-Site tRNA-Phe, mRNA, tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.6772014-10-01
1556N9E|1|2xTransfer RNAmRNA, P-site tRNA, Deacylated Initiator Methionyl-tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolutionX-ray diffraction3.7762018-12-12
1564P70|1|XVTransfer RNAA site ASL of tRNA-Proline CGG (unmodified), mRNA, P-site tRNA fMETEscherichia coliBacteriaRF00005Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.68772014-08-13
1574V8C|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.3772014-07-09
1586N9F|1|1xTransfer RNAmRNA, P-site tRNA, Deacylated Initiator Methionyl-tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolutionX-ray diffraction3.7762018-12-12
1594V5K|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.2772014-07-09
1604V7P|1|AWTransfer RNAmessenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3'), P-site tRNA-fMetEscherichia coliBacteriaRF00005Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.62772014-07-09
1615F8K|1|2xTransfer RNAmRNA, tRNAiMetEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.8762016-02-03
1624V67|1|CYTransfer RNAMRNA, P AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
1634P70|1|QVTransfer RNAA site ASL of tRNA-Proline CGG (unmodified), mRNA, P-site tRNA fMETEscherichia coliBacteriaRF00005Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.68772014-08-13
1644TUD|1|XVTransfer RNAA-site ASL-SufJ, messenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.6772015-05-13
1651VVJ|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.44772014-08-06
1666QNQ|1|3KTransfer RNAE. coli tRNAfMetEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.5772019-06-19
1674WQY|1|DXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.8762015-01-28
1681VY7|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.8762014-08-20
1696N9F|1|2xTransfer RNAmRNA, P-site tRNA, Deacylated Initiator Methionyl-tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolutionX-ray diffraction3.7762018-12-12
1705CZP|1|XVTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.3772016-10-12
1716GSK|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-ray diffraction3.36772018-07-04
1725CZP|1|QVTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.3772016-10-12
1734V9I|1|CVTransfer RNAmRNA, P-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.3772014-07-09
1744V8F|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.3772014-07-09
1754LSK|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.48772014-08-06
1764V6G|1|CDTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.5772014-07-09
1774V63|1|AYTransfer RNAmRNA, P and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.21772014-07-09
1784LFZ|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.92772014-08-06
1794LSK|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.48772014-08-06
1804V63|1|CYTransfer RNAmRNA, P and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.21772014-07-09
1811VVJ|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.44772014-08-06
1824LFZ|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.92772014-08-06
1833CW6|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.3772008-09-02
1843QSY|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-ray diffraction3.2772012-03-21
1854L71|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.9772014-08-06
1866QNQ|1|3LTransfer RNAE. coli tRNAfMetEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.5772019-06-19
1875D8B|1|FDTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.63772015-10-14
1886B4V|1|HBTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.4772018-02-07
1894V97|1|AVTransfer RNAE-SITE TRNA PHE OR A-SITE tRNA Phe, mRNA, P-SITE tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.52772014-07-09
1904LEL|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.9772014-08-06
1914V6G|1|ADTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.5772014-07-09
1924V8C|1|DDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.3772014-07-09
1934WZO|1|1KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.3702015-06-10
1944L71|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.9772014-08-06
1955D8B|1|EDTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.63772015-10-14
1966B4V|1|IATransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.4772018-02-07
1976B4V|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.4772018-02-07
1984V5K|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.2772014-07-09
1996B4V|1|MCTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.4772018-02-07
2004LEL|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.9772014-08-06
2014V8C|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.3772014-07-09
2024V97|1|CVTransfer RNAE-SITE TRNA PHE OR A-SITE tRNA Phe, mRNA, P-SITE tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.52772014-07-09
2034V8B|1|ADTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
2044V87|1|BDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.1772014-07-09
2056QNQ|1|1KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.5652019-06-19
2064W4G|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.3772015-10-21
2074W4G|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.3772015-10-21
2084V87|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.1772014-07-09
2094V63|1|CZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.21772014-07-09
2104V8B|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction3772014-07-09
2114V67|1|AZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
2124V63|1|AZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.21772014-07-09
2135D8B|1|XCTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.63772015-10-14
2144V8J|1|CVTransfer RNAmessenger RNA, tRNA-fMet, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.9772014-07-09
2154V6G|1|CBTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.5652014-07-09
2164V8O|1|AVTransfer RNAMRNA 5'-R(*AP*AP*AP*AP*AP*AP*UP*GP*UP)-3', PE HYBRID STATE TRNA FMETEscherichia coliBacteriaRF00005Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-ray diffraction3.8772014-07-09
2175D8B|1|BDTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.63772015-10-14
2184V8J|1|AVTransfer RNAmessenger RNA, tRNA-fMet, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.9772014-07-09
2194V67|1|CZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction3772014-07-09
2204V5K|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.2772014-07-09
2214V5K|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.2772014-07-09
2223V11|1|DTransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005Structure of the ternary initiation complex AIF2:GDPNP:methionylated initiator TRNAX-ray diffraction5762012-03-28
2234YPB|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.4772015-10-21
2244YPB|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.4772015-10-21
2254V4Z|1|ACTransfer RNAmRNA, tRNA fMET (unmodified bases)Escherichia coliBacteriaRF0000570S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.X-ray diffraction4.51762014-07-09
2264V8Q|1|BWTransfer RNAE-SITE or P-SITE TRNA FMETEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.1772014-07-09
2274V4X|1|ACTransfer RNAtRNA fMET (unmodified bases)Escherichia coliBacteriaRF00005Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.X-ray diffraction5762014-07-09
2286GSJ|1|2LTransfer RNARNA (27-MER), tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-ray diffraction2.96772018-07-04
2296GSJ|1|2KTransfer RNARNA (27-MER), tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-ray diffraction2.96772018-07-04
2304V6A|1|CWTransfer RNARNA (5'-R(P*AP*AP*AP*UP*G)-3'), tRNA-MetEscherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.1772014-07-09
2314V6A|1|AWTransfer RNARNA (5'-R(P*AP*AP*AP*UP*G)-3'), tRNA-MetEscherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.1772014-07-09
2326GSL|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-ray diffraction3.16772018-07-04
2336GSL|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-ray diffraction3.16772018-07-04
2346BOH|1|NCTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.4772018-05-23
2356BOH|1|IATransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.4772018-05-23
2366BOH|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.4772018-05-23
2376BOH|1|IBTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.4772018-05-23
2386AZ1|1|3Transfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinElectron microscopy2.7772017-12-06
2396Y69|1|wTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.86742020-07-01
2404BTC|1|V5'-R(*UP*AP*AP*AP*AP*AP*UP*GP*UP)-3', RNA (77-MER)Thermus thermophilus ribosomeX-ray diffraction2.9502013-08-07
2415AFI|1|vTransfer RNAmRNA, P-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.9772015-03-11
2425AFI|1|wTransfer RNAP-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.9772015-03-11
2436WDE|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy3772020-07-01
2446H4N|1|wTransfer RNAtRNAEscherichia coliBacteriaRF00005Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy3772018-09-05
2456WD0|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy3772020-07-01
2466WD0|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy3772020-07-01
2476WDE|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy3772020-07-01
2485H5U|1|5Transfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.01762017-01-25
2495J3C|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.04772016-10-12
2505WFS|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy3772018-05-02
2515WDT|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy3772018-04-25
2525WDT|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy3772018-04-25
2535WFS|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy3772018-05-02
2546OPE|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-ray diffraction3.1772020-06-24
2556OPE|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-ray diffraction3.1772020-06-24
2565J3C|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.04772016-10-12
2576ORE|1|5Transfer RNAP-tRNA, RNA (5'-R(P*UP*UP*CP*UP*UP*CP*UP*AP*A)-3')Escherichia coliBacteriaRF00005Release complex 70SElectron microscopy2.9762019-06-19
2586OTR|1|XVTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.12772019-08-21
2596OTR|1|QVTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.12772019-08-21
2606OTR|1|QWTransfer RNAtRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.12772019-08-21
2616ORD|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-ray diffraction3.1772020-06-24
2626OTR|1|XWTransfer RNAtRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.12772019-08-21
2635MDV|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.97762016-12-14
2646ORD|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-ray diffraction3.1772020-06-24
2656BZ6|1|QVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-ray diffraction3.18772018-11-14
2665WE4|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.1772018-04-25
2675WE4|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.1772018-04-25
2685U9G|1|WTransfer RNAfMet-tRNA (P- and E-site), truncated mRNAEscherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.2772017-03-22
2696WNW|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAElectron microscopy3.2772020-06-24
2705UYM|1|WTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.2772017-06-07
2715U9F|1|WTransfer RNAfMet-tRNA (P- and E-site), truncated mRNAEscherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.2772017-03-22
2726WDD|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.2772020-07-01
2735UQ8|1|yTransfer RNAP-site tRNA fMetEscherichia coliBacteriaRF0000570S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)Electron microscopy3.2772018-03-07
2745U9F|1|XTransfer RNAfMet-tRNA (P- and E-site)Escherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.2772017-03-22
2755UYM|1|XTransfer RNAtRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.2772017-06-07
2765U9G|1|XTransfer RNAfMet-tRNA (P- and E-site)Escherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.2772017-03-22
2776BZ6|1|XVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-ray diffraction3.18772018-11-14
2785MDW|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.06762016-12-14
2796OJ2|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-ray diffraction3.2772020-06-24
2806OF6|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-ray diffraction3.2772020-06-24
2816WDD|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.2772020-07-01
2826C4I|1|yTransfer RNAE-site or P-site tRNA fMetEscherichia coliBacteriaRF00005Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.24772018-02-21
2836C4I|1|xTransfer RNAE-site or P-site tRNA fMet, mRNAEscherichia coliBacteriaRF00005Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.24772018-02-21
2846OXA|1|XVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.25772019-08-21
2856OXA|1|QWTransfer RNAP-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.25772019-08-21
2865J30|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.2772016-10-12
2875J30|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.2772016-10-12
2886OF6|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-ray diffraction3.2772020-06-24
2896OJ2|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-ray diffraction3.2772020-06-24
2905MDZ|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of the 70S ribosome (empty A site)Electron microscopy3.1762016-12-14
2916OXA|1|QVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.25772019-08-21
2926WD1|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)Electron microscopy3.3772020-07-01
2932FMT|1|DTransfer RNAFORMYL-METHIONYL-TRNAFMET2synthetic constructSyntheticRF00005METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-ray diffraction2.8771999-07-29
2946OFX|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Non-rotated ribosome (Structure I)Electron microscopy3.3772019-09-25
2956WDG|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.3772020-07-01
2962FMT|1|CTransfer RNAFORMYL-METHIONYL-TRNAFMET2synthetic constructSyntheticRF00005METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-ray diffraction2.8771999-07-29
2976OXA|1|XWTransfer RNAP-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.25772019-08-21
2985ZEB|1|vTransfer RNAP-tRNAfMetEscherichia coliBacteriaRF00005M. Smegmatis P/P state 70S ribosome structureElectron microscopy3.4772018-09-26
2995ZEP|1|wTransfer RNAE-tRNAfMetEscherichia coliBacteriaRF00005M. smegmatis hibernating state 70S ribosome structureElectron microscopy3.4772018-09-26
3006WDF|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.3772020-07-01
3016OG7|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.3752019-09-25
3023JCE|1|8Transfer RNAmRNA, tRNAsynthetic constructSyntheticRF00005Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.2772016-01-13
3036OGI|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.4742019-09-25
3045LZD|1|vTransfer RNAfMet-tRNAfMetEscherichia coliBacteriaRF00005Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.4772016-11-23
3055WE6|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.4772018-04-25
3065WFK|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.4772018-05-02
3075WFK|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.4772018-05-02
3085WE6|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.4772018-04-25
3096BU8|1|XTransfer RNAtRNAfMetEscherichia coliBacteriaRF0000570S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.5772018-01-31
3106BU8|1|WTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.5772018-01-31
3115UQ7|1|yTransfer RNAP-site tRNA fMetEscherichia coliBacteriaRF0000570S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)Electron microscopy3.5772018-03-07
3125U4I|1|yTransfer RNAP-site or E-site fMet-tRNA(fMet)Escherichia coliBacteriaRF00005Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.5772017-01-11
3135U4I|1|xTransfer RNAmRNA, P-site or E-site fMet-tRNA(fMet)Escherichia coliBacteriaRF00005Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.5772017-01-11
3145MDY|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.35762016-12-21
3156OXI|1|XVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-ray diffraction3.49772019-08-21
3166OXI|1|QVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-ray diffraction3.49772019-08-21
3176BUW|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-ray diffraction3.5772018-11-14
3186WDM|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)Electron microscopy3.6772020-07-01
3195UYL|1|XTransfer RNAtRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)Electron microscopy3.6772017-06-14
3206WDM|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)Electron microscopy3.6772020-07-01
3215UYL|1|WTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)Electron microscopy3.6772017-06-14
3226BUW|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-ray diffraction3.5772018-11-14
3235LZA|1|vTransfer RNAfMet-tRNAfMet, SECIS mRNAEscherichia coliBacteriaRF00005Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)Electron microscopy3.6772016-11-23
3245WF0|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)Electron microscopy3.6772018-05-02
3255WF0|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)Electron microscopy3.6772018-05-02
3266WDJ|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)Electron microscopy3.7772020-07-01
3276WDL|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)Electron microscopy3.7772020-07-01
3286WDL|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)Electron microscopy3.7772020-07-01
3296WDJ|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)Electron microscopy3.7772020-07-01
3305ZEU|1|vTransfer RNAP-tRNAfMetEscherichia coliBacteriaRF00005M. smegmatis P/P state 30S ribosomal subunitElectron microscopy3.7772018-09-26
3316DNC|1|DTransfer RNAtRNA(fMet)Escherichia coliBacteriaRF00005E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonElectron microscopy3.7772018-07-04
3326DNC|1|LATransfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonElectron microscopy3.7772018-07-04
3336OSQ|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.5762019-06-26
3346OSK|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005RF1 accommodated 70S complex at 60 msElectron microscopy3.6762019-06-26
3356BZ7|1|XVTransfer RNAASL Leu, messenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.X-ray diffraction3.68772018-11-14
3365L3P|1|xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexElectron microscopy3.7772016-07-20
3373JCJ|1|vTransfer RNAmessenger RNA, tRNAEscherichia coliBacteriaRF00005Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.7772016-03-09
3386SWC|1|4Transfer RNAinitiator Met-tRNA fMet from E. coli (A1U72 variant), mRNAEscherichia coliBacteriaRF00005IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiElectron microscopy3.3762020-02-19
3396Q95|1|7Transfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosomeElectron microscopy3.7772019-02-27
3405UYQ|1|XTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)Electron microscopy3.8772017-06-07
3416GXM|1|xTransfer RNAfMet-tRNA, mRNAEscherichia coliBacteriaRF00005Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)Electron microscopy3.8772018-08-22
3425UYQ|1|WTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)Electron microscopy3.8772017-06-07
3436GWT|1|xTransfer RNAfMet-tRNA, mRNAEscherichia coliBacteriaRF00005Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)Electron microscopy3.8772018-08-15
3446BZ8|1|QVTransfer RNAASL Leu, messenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A siteX-ray diffraction3.74772018-11-14
3456BZ8|1|XVTransfer RNAASL Leu, messenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A siteX-ray diffraction3.74772018-11-14
3466NDK|1|XVTransfer RNAA-site ASLSufA6 A37.5, mRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Structure of ASLSufA6 A37.5 bound to the 70S A siteX-ray diffraction3.64772019-02-27
3476BZ7|1|QVTransfer RNAASL Leu, messenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.X-ray diffraction3.68772018-11-14
3486ORL|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.5762019-06-19
3495KPS|1|31Transfer RNAmRNA, P site tRNAfmetEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.9772016-09-28
3505KPW|1|31Transfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.9772016-09-28
3515UYK|1|WTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)Electron microscopy3.9772017-06-07
3525UYP|1|WTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)Electron microscopy3.9772017-06-07
3536GXN|1|xTransfer RNAfMet-tRNA, mRNAEscherichia coliBacteriaRF00005Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)Electron microscopy3.9772018-08-15
3545UYK|1|XTransfer RNAtRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)Electron microscopy3.9772017-06-07
3555UYP|1|XTransfer RNAtRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)Electron microscopy3.9772017-06-07
3566GXO|1|xTransfer RNAfMet-tRNA, mRNAEscherichia coliBacteriaRF00005Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)Electron microscopy3.9772018-08-15
3576NDK|1|QVTransfer RNAA-site ASLSufA6 A37.5, mRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Structure of ASLSufA6 A37.5 bound to the 70S A siteX-ray diffraction3.64772019-02-27
3585KPX|1|31Transfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.9772016-09-28
3595KPS|1|32Transfer RNAE-site tRNAfMetEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.9772016-09-28
3606OGF|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).Electron microscopy3.9732019-09-25
3613J9Y|1|vTransfer RNAmRNA, P-site fMet-tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.9772015-04-15
3625UYN|1|XTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)Electron microscopy4772017-06-07
3635UYN|1|WTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)Electron microscopy4772017-06-07
3646WDI|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)Electron microscopy4772020-07-01
3656WDB|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)Electron microscopy4772020-07-01
3666WDI|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)Electron microscopy4772020-07-01
3676O9K|1|yTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF0000570S initiation complexElectron microscopy4772019-05-29
3685IQR|1|5Transfer RNAmRNA, P-site fMet-tRNA(fMet)Escherichia coliBacteriaRF00005Structure of RelA bound to the 70S ribosomeElectron microscopy3772016-05-04
3696BZ7|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.X-ray diffraction3.68762018-11-14
3706WDB|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)Electron microscopy4772020-07-01
3715KPW|1|32Transfer RNAE-site tRNAfMetEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.9772016-09-28
3726BZ8|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A siteX-ray diffraction3.74772018-11-14
3736OUO|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005RF2 accommodated state bound 70S complex at long incubation timeElectron microscopy3.7762019-06-19
3746BZ7|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.X-ray diffraction3.68762018-11-14
3755KPV|1|31Transfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)Electron microscopy4.1772016-09-28
3766BZ8|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A siteX-ray diffraction3.74772018-11-14
3775KPX|1|32Transfer RNAE-site tRNAfMetEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.9772016-09-28
3786WDC|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B)Electron microscopy4.2772020-07-01
3796O7K|1|vTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF0000530S initiation complexElectron microscopy4.2772019-05-29
3806WDC|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B)Electron microscopy4.2772020-07-01
3816OGG|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).Electron microscopy4.2732019-09-25
3826WDH|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1)Electron microscopy4.3772020-07-01
3836WDH|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1)Electron microscopy4.3772020-07-01
3846OT3|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005RF2 accommodated state bound Release complex 70S at 24 msElectron microscopy3.9762019-06-19
3855KPV|1|32Transfer RNAE-site tRNAfMetEscherichia coliBacteriaRF00005Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)Electron microscopy4.1772016-09-28
3866OST|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005RF2 pre-accommodated state bound Release complex 70S at 24msElectron microscopy4.2762019-06-19
3875LMU|1|ZTransfer RNAmRNA, tRNAiEscherichia coliBacteriaRF00005Structure of bacterial 30S-IF3-mRNA-tRNA translation pre-initiation complex, closed form (state-4)Electron microscopy4772016-10-05
3885LZF|1|vTransfer RNASECIS mRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)Electron microscopy4.6772016-11-23
3893JCN|1|vTransfer RNAmessenger RNA, tRNAEscherichia coliBacteriaRF00005Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IElectron microscopy4.6772016-03-09
3903JBN|1|7Transfer RNAP-tRNAEscherichia coliBacteriaRF00005Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNAElectron microscopy4.7762015-10-14
3915LZC|1|vTransfer RNAfMet-tRNAfMetEscherichia coliBacteriaRF00005Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)Electron microscopy4.8772016-11-23
3925U4J|1|x+ 5U4J|1|zTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.7212017-01-11
3935LZB|1|vTransfer RNAfMet-tRNAfMetEscherichia coliBacteriaRF00005Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)Electron microscopy5.3772016-11-23
3945LMV|1|ZTransfer RNAmRNA, tRNAiEscherichia coliBacteriaRF00005Structure of bacterial 30S-IF1-IF2-IF3-mRNA-tRNA translation pre-initiation complex(state-III)Electron microscopy4.9772016-10-05
3953JBO|1|7Transfer RNAP/E-tRNAEscherichia coliBacteriaRF00005Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNAElectron microscopy5.8752015-10-14
3965LMQ|1|ZTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, open form (state-2A)Electron microscopy4.2772016-10-05
3973J77|1|PTTransfer RNAmessenger RNA, P/E-site initiator transfer RNAfMetEscherichia coliBacteriaRF00005Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)Electron microscopy6.2772014-08-06
3983J78|1|ETTransfer RNAP/E-site initiator transfer RNAfMetEscherichia coliBacteriaRF00005Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)Electron microscopy6.3772014-08-06
3993J78|1|PTTransfer RNAmessenger RNA, P/E-site initiator transfer RNAfMetEscherichia coliBacteriaRF00005Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)Electron microscopy6.3772014-08-06
4005LMS|1|ZTransfer RNAmRNA, tRNAiEscherichia coliBacteriaRF00005Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-2C)Electron microscopy5.1772016-10-05
4015JBH|1|4Transfer RNAinitiator Met-tRNA fMet from E. coli (A1U72 variant), mRNAEscherichia coliBacteriaRF00005Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-IN conformationElectron microscopy5.34762016-12-07
4026SW9|1|4Transfer RNAinitiator Met-tRNA fMet from E. coli (A1U72 variant), mRNAEscherichia coliBacteriaRF00005IC2A model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiElectron microscopy4.2762020-02-19
4035JB3|1|4Transfer RNAinitiator Met-tRNA fMet from E. coli (A1U72 variant)Escherichia coliBacteriaRF00005Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformationElectron microscopy5.34762016-11-30
4044V69|1|AVTransfer RNAE-site tRNA Phe, mRNAEscherichia coliBacteriaRF00005Ternary complex-bound E.coli 70S ribosome.Electron microscopy6.7772014-07-09
4054V7B|1|AVTransfer RNAmessenger RNA, modified formyl-methionine specific initiator transfer RNAEscherichia coliBacteriaRF00005Visualization of two tRNAs trapped in transit during EF-G-mediated translocationElectron microscopy6.8772014-07-09
4063J5S|1|ETransfer RNAP-site tRNA FMetEscherichia coliBacteriaRF00005EttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamicsElectron microscopy7.5772014-01-08
4076H58|1|wTransfer RNAtRNA MixtureEscherichia coliBacteriaRF00005Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeElectron microscopy7.9772018-09-05
4086H58|1|wwTransfer RNAtRNA MixtureEscherichia coliBacteriaRF00005Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeElectron microscopy7.9772018-09-05
4094V6V|1|A3Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005Tetracycline resistance protein Tet(O) bound to the ribosomeElectron microscopy9.8772014-07-09
4104V6T|1|AXTransfer RNAformyl-methionine specific initiator transfer RNAEscherichia coliBacteriaRF00005Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingElectron microscopy8.3772014-07-09
4113DEG|1|BTransfer RNAP-tRNAEscherichia coliBacteriaRF00005Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNPElectron microscopy10.9772008-08-19
4124V6R|1|ADTransfer RNAmRNA, P site tRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)Electron microscopy11.5772014-07-09
4134V6Q|1|ADTransfer RNAmRNA, P site tRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)Electron microscopy11.5772014-07-09
4141EG0|1|OTransfer RNAFORMYL-METHIONYL-TRNAEscherichia coliBacteriaRF00005FITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOMEElectron microscopy11.5762000-03-06
4154V6Y|1|A3Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)Electron microscopy12772014-07-09
4164V6Z|1|A3Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)Electron microscopy12772014-07-09
4174V75|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)Electron microscopy12772014-07-09
4184V6N|1|BDTransfer RNAmRNA, P site tRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)Electron microscopy12.1772014-07-09
4195ZEY|1|BTransfer RNAA-tRNAfMetEscherichia coliBacteriaRF00005M. smegmatis Trans-translation state 70S ribosomeElectron microscopy12.5772018-09-26
4204V72|1|A3Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)Electron microscopy13772014-07-09
4214V6S|1|BCTransfer RNAmRNA, P site tRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)Electron microscopy13.1772014-07-09
4224V6P|1|ADTransfer RNAmRNA, P site tRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)Electron microscopy13.5772014-07-09
4235ME1|1|XTransfer RNAfMet-tRNAEscherichia coliBacteriaRF00005Structure of the 30S Pre-Initiation Complex 2 (30S IC-2) Stalled by GE81112Electron microscopy13.5772017-01-11
4244V6O|1|ADTransfer RNAmRNA, P site tRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)Electron microscopy14.7772014-07-09
4254V79|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)Electron microscopy15772014-07-09
4264V73|1|A3Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)Electron microscopy15772014-07-09
4275ME0|1|XTransfer RNAfMet-tRNAEscherichia coliBacteriaRF00005Structure of the 30S Pre-Initiation Complex 1 (30S IC-1) Stalled by GE81112Electron microscopy13.5772017-01-11
4284V74|1|A3Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', tRNA-fMetEscherichia coliBacteriaRF0000570S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)Electron microscopy17772014-07-09
4294V70|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)Electron microscopy17772014-07-09
4304V77|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)Electron microscopy17772014-07-09
4314V76|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)Electron microscopy17772014-07-09
4324V71|1|A3Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)Electron microscopy20772014-07-09
4334V78|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)Electron microscopy20772014-07-09

Release history

Release3.133
Date2020-07-01

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_35542.68NR_20.0_35542.673.133(409) 1EG0|1|O, 1VVJ|1|QV, 1VVJ|1|XV, 1VY4|1|AX, 1VY4|1|CX, 1VY5|1|AX, 1VY5|1|CX, 1VY6|1|AX, 1VY6|1|CX, 1VY7|1|AX, 1VY7|1|CX, 2FMT|1|C, 2FMT|1|D, 3CW5|1|A, 3CW6|1|A, 3DEG|1|B, 3J5S|1|E, 3J77|1|PT, 3J78|1|ET, 3J78|1|PT, 3J9Y|1|v, 3JBN|1|7, 3JBO|1|7, 3JCE|1|8, 3JCJ|1|v, 3JCN|1|v, 3QSY|1|D, 3V11|1|D, 4BTC|1|V, 4L71|1|QV, 4L71|1|XV, 4LEL|1|QV, 4LEL|1|XV, 4LFZ|1|QV, 4LFZ|1|XV, 4LNT|1|QV, 4LNT|1|XV, 4LSK|1|QV, 4LSK|1|XV, 4LT8|1|QV, 4LT8|1|XV, 4P6F|1|QV, 4P6F|1|XV, 4P70|1|QV, 4P70|1|XV, 4TUA|1|QV, 4TUA|1|XV, 4TUB|1|QV, 4TUB|1|XV, 4TUC|1|QV, 4TUC|1|XV, 4TUD|1|QV, 4TUD|1|XV, 4V4X|1|AC, 4V4Z|1|AC, 4V51|1|AV, 4V51|1|CV, 4V5C|1|AV, 4V5C|1|CV, 4V5F|1|AV, 4V5F|1|AW, 4V5F|1|CV, 4V5F|1|CW, 4V5K|1|AV, 4V5K|1|AW, 4V5K|1|CV, 4V5K|1|CW, 4V63|1|AY, 4V63|1|AZ, 4V63|1|CY, 4V63|1|CZ, 4V67|1|AY, 4V67|1|AZ, 4V67|1|CY, 4V67|1|CZ, 4V69|1|AV, 4V6A|1|AW, 4V6A|1|CW, 4V6G|1|AC, 4V6G|1|AD, 4V6G|1|CB, 4V6G|1|CC, 4V6G|1|CD, 4V6N|1|BD, 4V6O|1|AD, 4V6P|1|AD, 4V6Q|1|AD, 4V6R|1|AD, 4V6S|1|BC, 4V6T|1|AX, 4V6V|1|A3, 4V6Y|1|A3, 4V6Z|1|A3, 4V70|1|A3, 4V71|1|A3, 4V72|1|A3, 4V73|1|A3, 4V74|1|A3, 4V75|1|A3, 4V76|1|A3, 4V77|1|A3, 4V78|1|A3, 4V79|1|A3, 4V7B|1|AV, 4V7L|1|AX, 4V7L|1|CX, 4V7M|1|AX, 4V7M|1|CX, 4V7P|1|AW, 4V7P|1|DW, 4V87|1|BC, 4V87|1|BD, 4V87|1|CC, 4V87|1|CD, 4V8B|1|AC, 4V8B|1|AD, 4V8B|1|CC, 4V8B|1|CD, 4V8C|1|CC, 4V8C|1|CD, 4V8C|1|DC, 4V8C|1|DD, 4V8D|1|AC, 4V8D|1|CC, 4V8E|1|BC, 4V8E|1|DC, 4V8F|1|BC, 4V8F|1|CC, 4V8J|1|AV, 4V8J|1|CV, 4V8O|1|AV, 4V8Q|1|BV, 4V8Q|1|BW, 4V97|1|AV, 4V97|1|CV, 4V9I|1|AV, 4V9I|1|CV, 4V9R|1|AX, 4V9R|1|CX, 4V9S|1|AX, 4V9S|1|CX, 4W2F|1|AX, 4W2F|1|CX, 4W2G|1|AX, 4W2G|1|CX, 4W2H|1|AX, 4W2H|1|CX, 4W2I|1|AX, 4W2I|1|CX, 4W4G|1|QV, 4W4G|1|QW, 4W4G|1|XV, 4W4G|1|XW, 4WPO|1|BX, 4WPO|1|DX, 4WQ1|1|2K, 4WQ1|1|2L, 4WQR|1|2K, 4WQR|1|2L, 4WQY|1|BX, 4WQY|1|DX, 4WR6|1|2K, 4WR6|1|2L, 4WRA|1|2K, 4WRA|1|2L, 4WRO|1|2K, 4WRO|1|2L, 4WSD|1|2K, 4WSD|1|2L, 4WT1|1|2K, 4WT1|1|2L, 4WZO|1|1K, 4WZO|1|2K, 4WZO|1|2L, 4Y4P|1|1x, 4Y4P|1|2x, 4YPB|1|QV, 4YPB|1|QW, 4YPB|1|XV, 4YPB|1|XW, 4YZV|1|QV, 4YZV|1|XV, 4Z3S|1|1x, 4Z3S|1|2x, 4Z8C|1|1x, 4Z8C|1|2x, 4ZER|1|1x, 4ZER|1|2x, 4ZSN|1|QV, 4ZSN|1|XV, 5AFI|1|v, 5AFI|1|w, 5CZP|1|QV, 5CZP|1|XV, 5D8B|1|BD, 5D8B|1|ED, 5D8B|1|FD, 5D8B|1|XC, 5DFE|1|QV, 5DFE|1|XV, 5DOY|1|1x, 5DOY|1|2x, 5E7K|1|2K, 5E7K|1|2L, 5EL4|1|2K, 5EL4|1|2L, 5EL5|1|2K, 5EL5|1|2L, 5EL6|1|2K, 5EL6|1|2L, 5EL7|1|2K, 5EL7|1|2L, 5F8K|1|1x, 5F8K|1|2x, 5H5U|1|5, 5HAU|1|1w, 5HAU|1|2w, 5HCP|1|1x, 5HCP|1|2x, 5HCQ|1|1x, 5HCQ|1|2x, 5HCR|1|1x, 5HCR|1|2x, 5HD1|1|1x, 5HD1|1|2x, 5IB7|1|2K, 5IB7|1|2L, 5IB8|1|2K, 5IB8|1|2L, 5IBB|1|2K, 5IBB|1|2L, 5IQR|1|5, 5J30|1|QV, 5J30|1|XV, 5J3C|1|QV, 5J3C|1|XV, 5J4B|1|1x, 5J4B|1|2x, 5J4C|1|1x, 5J4C|1|2x, 5JB3|1|4, 5JBH|1|4, 5KPS|1|31, 5KPS|1|32, 5KPV|1|31, 5KPV|1|32, 5KPW|1|31, 5KPW|1|32, 5KPX|1|31, 5KPX|1|32, 5L3P|1|x, 5L4O|1|A, 5LMQ|1|Z, 5LMS|1|Z, 5LMU|1|Z, 5LMV|1|Z, 5LZA|1|v, 5LZB|1|v, 5LZC|1|v, 5LZD|1|v, 5LZF|1|v, 5MDV|1|5, 5MDW|1|5, 5MDY|1|5, 5MDZ|1|5, 5ME0|1|X, 5ME1|1|X, 5U4I|1|x, 5U4I|1|y, 5U4J|1|x+5U4J|1|z, 5U9F|1|W, 5U9F|1|X, 5U9G|1|W, 5U9G|1|X, 5UQ7|1|y, 5UQ8|1|y, 5UYK|1|W, 5UYK|1|X, 5UYL|1|W, 5UYL|1|X, 5UYM|1|W, 5UYM|1|X, 5UYN|1|W, 5UYN|1|X, 5UYP|1|W, 5UYP|1|X, 5UYQ|1|W, 5UYQ|1|X, 5W4K|1|1x, 5W4K|1|2x, 5WDT|1|v, 5WDT|1|w, 5WE4|1|v, 5WE4|1|w, 5WE6|1|v, 5WE6|1|w, 5WF0|1|v, 5WF0|1|w, 5WFK|1|v, 5WFK|1|w, 5WFS|1|v, 5WFS|1|w, 5WIS|1|1x, 5WIS|1|2x, 5WIT|1|1x, 5WIT|1|2x, 5ZEB|1|v, 5ZEP|1|w, 5ZEU|1|v, 5ZEY|1|B, 6AZ1|1|3, 6B4V|1|D, 6B4V|1|HB, 6B4V|1|IA, 6B4V|1|MC, 6BOH|1|D, 6BOH|1|IA, 6BOH|1|IB, 6BOH|1|NC, 6BU8|1|W, 6BU8|1|X, 6BUW|1|QV, 6BUW|1|XV, 6BZ6|1|QV, 6BZ6|1|XV, 6BZ7|1|QV, 6BZ7|1|QW, 6BZ7|1|XV, 6BZ7|1|XW, 6BZ8|1|QV, 6BZ8|1|QW, 6BZ8|1|XV, 6BZ8|1|XW, 6C4I|1|x, 6C4I|1|y, 6CAE|1|1x, 6CAE|1|2x, 6DNC|1|D, 6DNC|1|LA, 6GSJ|1|2K, 6GSJ|1|2L, 6GSK|1|2K, 6GSK|1|2L, 6GSL|1|2K, 6GSL|1|2L, 6GWT|1|x, 6GXM|1|x, 6GXN|1|x, 6GXO|1|x, 6H4N|1|w, 6H58|1|w, 6H58|1|ww, 6N9E|1|1x, 6N9E|1|2x, 6N9F|1|1x, 6N9F|1|2x, 6ND5|1|1x, 6ND5|1|2x, 6ND6|1|1x, 6ND6|1|2x, 6NDK|1|QV, 6NDK|1|XV, 6O7K|1|v, 6O97|1|1x, 6O97|1|2x, 6O9K|1|y, 6OF1|1|1x, 6OF1|1|2x, 6OF6|1|QV, 6OF6|1|XV, 6OFX|1|5, 6OG7|1|5, 6OGF|1|5, 6OGG|1|5, 6OGI|1|5, 6OJ2|1|QV, 6OJ2|1|XV, 6OPE|1|QV, 6OPE|1|XV, 6ORD|1|QV, 6ORD|1|XV, 6ORE|1|5, 6ORL|1|5, 6OSK|1|5, 6OSQ|1|5, 6OST|1|5, 6OT3|1|5, 6OTR|1|QV, 6OTR|1|QW, 6OTR|1|XV, 6OTR|1|XW, 6OUO|1|5, 6OXA|1|QV, 6OXA|1|QW, 6OXA|1|XV, 6OXA|1|XW, 6OXI|1|QV, 6OXI|1|XV, 6Q95|1|7, 6QNQ|1|1K, 6QNQ|1|2K, 6QNQ|1|2L, 6QNQ|1|3K, 6QNQ|1|3L, 6SW9|1|4, 6SWC|1|4, 6UO1|1|1x, 6UO1|1|2x, 6WNW|1|5(24) 6WD0|1|5, 6WD0|1|6, 6WD1|1|5, 6WDB|1|5, 6WDB|1|6, 6WDC|1|5, 6WDC|1|6, 6WDD|1|5, 6WDD|1|6, 6WDE|1|5, 6WDE|1|6, 6WDF|1|5, 6WDG|1|5, 6WDH|1|5, 6WDH|1|6, 6WDI|1|5, 6WDI|1|6, 6WDJ|1|5, 6WDJ|1|6, 6WDL|1|5, 6WDL|1|6, 6WDM|1|5, 6WDM|1|6, 6Y69|1|w(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_35542.68NR_20.0_35542.693.134(433) 1EG0|1|O, 1VVJ|1|QV, 1VVJ|1|XV, 1VY4|1|AX, 1VY4|1|CX, 1VY5|1|AX, 1VY5|1|CX, 1VY6|1|AX, 1VY6|1|CX, 1VY7|1|AX, 1VY7|1|CX, 2FMT|1|C, 2FMT|1|D, 3CW5|1|A, 3CW6|1|A, 3DEG|1|B, 3J5S|1|E, 3J77|1|PT, 3J78|1|ET, 3J78|1|PT, 3J9Y|1|v, 3JBN|1|7, 3JBO|1|7, 3JCE|1|8, 3JCJ|1|v, 3JCN|1|v, 3QSY|1|D, 3V11|1|D, 4BTC|1|V, 4L71|1|QV, 4L71|1|XV, 4LEL|1|QV, 4LEL|1|XV, 4LFZ|1|QV, 4LFZ|1|XV, 4LNT|1|QV, 4LNT|1|XV, 4LSK|1|QV, 4LSK|1|XV, 4LT8|1|QV, 4LT8|1|XV, 4P6F|1|QV, 4P6F|1|XV, 4P70|1|QV, 4P70|1|XV, 4TUA|1|QV, 4TUA|1|XV, 4TUB|1|QV, 4TUB|1|XV, 4TUC|1|QV, 4TUC|1|XV, 4TUD|1|QV, 4TUD|1|XV, 4V4X|1|AC, 4V4Z|1|AC, 4V51|1|AV, 4V51|1|CV, 4V5C|1|AV, 4V5C|1|CV, 4V5F|1|AV, 4V5F|1|AW, 4V5F|1|CV, 4V5F|1|CW, 4V5K|1|AV, 4V5K|1|AW, 4V5K|1|CV, 4V5K|1|CW, 4V63|1|AY, 4V63|1|AZ, 4V63|1|CY, 4V63|1|CZ, 4V67|1|AY, 4V67|1|AZ, 4V67|1|CY, 4V67|1|CZ, 4V69|1|AV, 4V6A|1|AW, 4V6A|1|CW, 4V6G|1|AC, 4V6G|1|AD, 4V6G|1|CB, 4V6G|1|CC, 4V6G|1|CD, 4V6N|1|BD, 4V6O|1|AD, 4V6P|1|AD, 4V6Q|1|AD, 4V6R|1|AD, 4V6S|1|BC, 4V6T|1|AX, 4V6V|1|A3, 4V6Y|1|A3, 4V6Z|1|A3, 4V70|1|A3, 4V71|1|A3, 4V72|1|A3, 4V73|1|A3, 4V74|1|A3, 4V75|1|A3, 4V76|1|A3, 4V77|1|A3, 4V78|1|A3, 4V79|1|A3, 4V7B|1|AV, 4V7L|1|AX, 4V7L|1|CX, 4V7M|1|AX, 4V7M|1|CX, 4V7P|1|AW, 4V7P|1|DW, 4V87|1|BC, 4V87|1|BD, 4V87|1|CC, 4V87|1|CD, 4V8B|1|AC, 4V8B|1|AD, 4V8B|1|CC, 4V8B|1|CD, 4V8C|1|CC, 4V8C|1|CD, 4V8C|1|DC, 4V8C|1|DD, 4V8D|1|AC, 4V8D|1|CC, 4V8E|1|BC, 4V8E|1|DC, 4V8F|1|BC, 4V8F|1|CC, 4V8J|1|AV, 4V8J|1|CV, 4V8O|1|AV, 4V8Q|1|BV, 4V8Q|1|BW, 4V97|1|AV, 4V97|1|CV, 4V9I|1|AV, 4V9I|1|CV, 4V9R|1|AX, 4V9R|1|CX, 4V9S|1|AX, 4V9S|1|CX, 4W2F|1|AX, 4W2F|1|CX, 4W2G|1|AX, 4W2G|1|CX, 4W2H|1|AX, 4W2H|1|CX, 4W2I|1|AX, 4W2I|1|CX, 4W4G|1|QV, 4W4G|1|QW, 4W4G|1|XV, 4W4G|1|XW, 4WPO|1|BX, 4WPO|1|DX, 4WQ1|1|2K, 4WQ1|1|2L, 4WQR|1|2K, 4WQR|1|2L, 4WQY|1|BX, 4WQY|1|DX, 4WR6|1|2K, 4WR6|1|2L, 4WRA|1|2K, 4WRA|1|2L, 4WRO|1|2K, 4WRO|1|2L, 4WSD|1|2K, 4WSD|1|2L, 4WT1|1|2K, 4WT1|1|2L, 4WZO|1|1K, 4WZO|1|2K, 4WZO|1|2L, 4Y4P|1|1x, 4Y4P|1|2x, 4YPB|1|QV, 4YPB|1|QW, 4YPB|1|XV, 4YPB|1|XW, 4YZV|1|QV, 4YZV|1|XV, 4Z3S|1|1x, 4Z3S|1|2x, 4Z8C|1|1x, 4Z8C|1|2x, 4ZER|1|1x, 4ZER|1|2x, 4ZSN|1|QV, 4ZSN|1|XV, 5AFI|1|v, 5AFI|1|w, 5CZP|1|QV, 5CZP|1|XV, 5D8B|1|BD, 5D8B|1|ED, 5D8B|1|FD, 5D8B|1|XC, 5DFE|1|QV, 5DFE|1|XV, 5DOY|1|1x, 5DOY|1|2x, 5E7K|1|2K, 5E7K|1|2L, 5EL4|1|2K, 5EL4|1|2L, 5EL5|1|2K, 5EL5|1|2L, 5EL6|1|2K, 5EL6|1|2L, 5EL7|1|2K, 5EL7|1|2L, 5F8K|1|1x, 5F8K|1|2x, 5H5U|1|5, 5HAU|1|1w, 5HAU|1|2w, 5HCP|1|1x, 5HCP|1|2x, 5HCQ|1|1x, 5HCQ|1|2x, 5HCR|1|1x, 5HCR|1|2x, 5HD1|1|1x, 5HD1|1|2x, 5IB7|1|2K, 5IB7|1|2L, 5IB8|1|2K, 5IB8|1|2L, 5IBB|1|2K, 5IBB|1|2L, 5IQR|1|5, 5J30|1|QV, 5J30|1|XV, 5J3C|1|QV, 5J3C|1|XV, 5J4B|1|1x, 5J4B|1|2x, 5J4C|1|1x, 5J4C|1|2x, 5JB3|1|4, 5JBH|1|4, 5KPS|1|31, 5KPS|1|32, 5KPV|1|31, 5KPV|1|32, 5KPW|1|31, 5KPW|1|32, 5KPX|1|31, 5KPX|1|32, 5L3P|1|x, 5L4O|1|A, 5LMQ|1|Z, 5LMS|1|Z, 5LMU|1|Z, 5LMV|1|Z, 5LZA|1|v, 5LZB|1|v, 5LZC|1|v, 5LZD|1|v, 5LZF|1|v, 5MDV|1|5, 5MDW|1|5, 5MDY|1|5, 5MDZ|1|5, 5ME0|1|X, 5ME1|1|X, 5U4I|1|x, 5U4I|1|y, 5U4J|1|x+5U4J|1|z, 5U9F|1|W, 5U9F|1|X, 5U9G|1|W, 5U9G|1|X, 5UQ7|1|y, 5UQ8|1|y, 5UYK|1|W, 5UYK|1|X, 5UYL|1|W, 5UYL|1|X, 5UYM|1|W, 5UYM|1|X, 5UYN|1|W, 5UYN|1|X, 5UYP|1|W, 5UYP|1|X, 5UYQ|1|W, 5UYQ|1|X, 5W4K|1|1x, 5W4K|1|2x, 5WDT|1|v, 5WDT|1|w, 5WE4|1|v, 5WE4|1|w, 5WE6|1|v, 5WE6|1|w, 5WF0|1|v, 5WF0|1|w, 5WFK|1|v, 5WFK|1|w, 5WFS|1|v, 5WFS|1|w, 5WIS|1|1x, 5WIS|1|2x, 5WIT|1|1x, 5WIT|1|2x, 5ZEB|1|v, 5ZEP|1|w, 5ZEU|1|v, 5ZEY|1|B, 6AZ1|1|3, 6B4V|1|D, 6B4V|1|HB, 6B4V|1|IA, 6B4V|1|MC, 6BOH|1|D, 6BOH|1|IA, 6BOH|1|IB, 6BOH|1|NC, 6BU8|1|W, 6BU8|1|X, 6BUW|1|QV, 6BUW|1|XV, 6BZ6|1|QV, 6BZ6|1|XV, 6BZ7|1|QV, 6BZ7|1|QW, 6BZ7|1|XV, 6BZ7|1|XW, 6BZ8|1|QV, 6BZ8|1|QW, 6BZ8|1|XV, 6BZ8|1|XW, 6C4I|1|x, 6C4I|1|y, 6CAE|1|1x, 6CAE|1|2x, 6DNC|1|D, 6DNC|1|LA, 6GSJ|1|2K, 6GSJ|1|2L, 6GSK|1|2K, 6GSK|1|2L, 6GSL|1|2K, 6GSL|1|2L, 6GWT|1|x, 6GXM|1|x, 6GXN|1|x, 6GXO|1|x, 6H4N|1|w, 6H58|1|w, 6H58|1|ww, 6N9E|1|1x, 6N9E|1|2x, 6N9F|1|1x, 6N9F|1|2x, 6ND5|1|1x, 6ND5|1|2x, 6ND6|1|1x, 6ND6|1|2x, 6NDK|1|QV, 6NDK|1|XV, 6O7K|1|v, 6O97|1|1x, 6O97|1|2x, 6O9K|1|y, 6OF1|1|1x, 6OF1|1|2x, 6OF6|1|QV, 6OF6|1|XV, 6OFX|1|5, 6OG7|1|5, 6OGF|1|5, 6OGG|1|5, 6OGI|1|5, 6OJ2|1|QV, 6OJ2|1|XV, 6OPE|1|QV, 6OPE|1|XV, 6ORD|1|QV, 6ORD|1|XV, 6ORE|1|5, 6ORL|1|5, 6OSK|1|5, 6OSQ|1|5, 6OST|1|5, 6OT3|1|5, 6OTR|1|QV, 6OTR|1|QW, 6OTR|1|XV, 6OTR|1|XW, 6OUO|1|5, 6OXA|1|QV, 6OXA|1|QW, 6OXA|1|XV, 6OXA|1|XW, 6OXI|1|QV, 6OXI|1|XV, 6Q95|1|7, 6QNQ|1|1K, 6QNQ|1|2K, 6QNQ|1|2L, 6QNQ|1|3K, 6QNQ|1|3L, 6SW9|1|4, 6SWC|1|4, 6UO1|1|1x, 6UO1|1|2x, 6WD0|1|5, 6WD0|1|6, 6WD1|1|5, 6WDB|1|5, 6WDB|1|6, 6WDC|1|5, 6WDC|1|6, 6WDD|1|5, 6WDD|1|6, 6WDE|1|5, 6WDE|1|6, 6WDF|1|5, 6WDG|1|5, 6WDH|1|5, 6WDH|1|6, 6WDI|1|5, 6WDI|1|6, 6WDJ|1|5, 6WDJ|1|6, 6WDL|1|5, 6WDL|1|6, 6WDM|1|5, 6WDM|1|6, 6WNW|1|5, 6Y69|1|w(0) (20) 6WD2|1|5, 6WD2|1|6, 6WD3|1|5, 6WD3|1|6, 6WD4|1|5, 6WD4|1|6, 6WD5|1|5, 6WD5|1|6, 6WD6|1|5, 6WD6|1|6, 6WD7|1|5, 6WD7|1|6, 6WD8|1|5, 6WD8|1|6, 6WD9|1|5, 6WD9|1|6, 6WDA|1|5, 6WDA|1|6, 6WDK|1|5, 6WDK|1|6

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
11EG0|1|OFITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOMEELECTRON MICROSCOPY11.576
24V6O|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.777
34V6N|1|BDStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.177
44V6S|1|BCStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.177
56OT3|1|5RF2 accommodated state bound Release complex 70S at 24 msELECTRON MICROSCOPY3.976
66OUO|1|5RF2 accommodated state bound 70S complex at long incubation timeELECTRON MICROSCOPY3.776
76OSQ|1|5RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.576
86ORE|1|5Release complex 70SELECTRON MICROSCOPY2.976
96OSK|1|5RF1 accommodated 70S complex at 60 msELECTRON MICROSCOPY3.676
106ORL|1|5RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.576
116OST|1|5RF2 pre-accommodated state bound Release complex 70S at 24msELECTRON MICROSCOPY4.276
124V6V|1|A3Tetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.877
136AZ1|1|3Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinELECTRON MICROSCOPY2.777
144V4X|1|ACCrystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.X-RAY DIFFRACTION576
154V4Z|1|AC70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.X-RAY DIFFRACTION4.5176
166Q95|1|7Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosomeELECTRON MICROSCOPY3.777
175IQR|1|5Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY377
185MDW|1|5Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.0676
195MDY|1|5Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.3576
205MDZ|1|5Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.176
215MDV|1|5Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.9776
226C4I|1|xConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.2477
234V69|1|AVTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.777
243J5S|1|EEttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamicsELECTRON MICROSCOPY7.577
253J78|1|PTStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.377
265U9G|1|W3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.277
274V5K|1|CVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
284V7B|1|AVVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.877
294V5F|1|AVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.677
304V5F|1|CVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.677
311VY7|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.876
323JBN|1|7Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNAELECTRON MICROSCOPY4.776
336OPE|1|XVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-RAY DIFFRACTION3.177
346OPE|1|QVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-RAY DIFFRACTION3.177
356ORD|1|QVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-RAY DIFFRACTION3.177
366OJ2|1|QVCrystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-RAY DIFFRACTION3.277
376OJ2|1|XVCrystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-RAY DIFFRACTION3.277
386ORD|1|XVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-RAY DIFFRACTION3.177
395UQ7|1|y70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)ELECTRON MICROSCOPY3.577
405UQ8|1|y70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)ELECTRON MICROSCOPY3.277
414V6G|1|ACInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
426QNQ|1|2L70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.577
435CZP|1|XV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.377
445DFE|1|XV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.177
455J30|1|XVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.277
465J3C|1|XVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.0477
476UO1|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9576
484WPO|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.876
494WQY|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.876
504W2H|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.776
514V9S|1|CXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
524V9R|1|CXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
534W2I|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.776
544Z3S|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6576
555DOY|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.676
566ND5|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.676
576CAE|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
586O97|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-RAY DIFFRACTION2.7576
596ND6|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8576
605WIS|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
614Y4P|1|2xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.576
625W4K|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
635J4B|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
645J4C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.876
651VY6|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.976
661VY4|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.676
671VY5|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5576
684W2G|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5576
694W2F|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.476
705WIT|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
716OF1|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-RAY DIFFRACTION2.876
726N9F|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolutionX-RAY DIFFRACTION3.776
736N9E|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolutionX-RAY DIFFRACTION3.776
746OF6|1|XVCrystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-RAY DIFFRACTION3.277
756OF6|1|QVCrystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-RAY DIFFRACTION3.277
761VVJ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
774LFZ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
784L71|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
794LEL|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
804LEL|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
814L71|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
824LFZ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
834LSK|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
844LSK|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
851VVJ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
864LT8|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
874LNT|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
884LT8|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
894LNT|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
904P6F|1|QVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
914TUB|1|QVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
924TUD|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
934TUA|1|QVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
944TUC|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
954P70|1|QVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
964P70|1|XVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
974P6F|1|XVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
984TUC|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
994TUD|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
1004TUA|1|XVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
1014TUB|1|XVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
1025J30|1|QVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.277
1035J3C|1|QVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.0477
1045CZP|1|QV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.377
1055DFE|1|QV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.177
1065D8B|1|EDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1075D8B|1|FDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1084V67|1|CYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1094V67|1|AYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1104V63|1|CYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1114V63|1|AYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1124V7P|1|AWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
1134V7P|1|DWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
1144V8Q|1|BVComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
1154YPB|1|QVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1164W4G|1|QVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1174ZSN|1|QV70S-wild-type HigB toxin complex bound to a AAA lysine codonX-RAY DIFFRACTION3.677
1184YZV|1|QVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
1194YZV|1|XVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
1204ZSN|1|XV70S-wild-type HigB toxin complex bound to a AAA lysine codonX-RAY DIFFRACTION3.677
1214YPB|1|XVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1224W4G|1|XVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1235H5U|1|5Mechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.0176
1243JCE|1|8Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.277
1254V51|1|CVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.877
1263DEG|1|BComplex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNPELECTRON MICROSCOPY10.977
1274V51|1|AVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.877
1284V9I|1|CVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
1294V9I|1|AVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
1304V7L|1|AXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
1314V5C|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.377
1324V7M|1|AXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
1334V7M|1|CXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
1344V7L|1|CXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
1356NDK|1|QVStructure of ASLSufA6 A37.5 bound to the 70S A siteX-RAY DIFFRACTION3.6477
1366NDK|1|XVStructure of ASLSufA6 A37.5 bound to the 70S A siteX-RAY DIFFRACTION3.6477
1374V6A|1|AWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
1384V6A|1|CWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
1394V8J|1|CVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
1404V97|1|CVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
1414V97|1|AVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
1424V8J|1|AVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
1436BUW|1|QVThermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-RAY DIFFRACTION3.577
1446BZ7|1|QVThermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.X-RAY DIFFRACTION3.6877
1456BZ7|1|XVThermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.X-RAY DIFFRACTION3.6877
1466BZ6|1|QVThermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-RAY DIFFRACTION3.1877
1476BZ6|1|XVThermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-RAY DIFFRACTION3.1877
1486BUW|1|XVThermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-RAY DIFFRACTION3.577
1496BZ8|1|XVThermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A siteX-RAY DIFFRACTION3.7477
1506BZ8|1|QVThermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A siteX-RAY DIFFRACTION3.7477
1515UYQ|1|W70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)ELECTRON MICROSCOPY3.877
1525UYP|1|W70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)ELECTRON MICROSCOPY3.977
1535UYK|1|W70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.977
1545UYN|1|W70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)ELECTRON MICROSCOPY477
1556WDJ|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)ELECTRON MICROSCOPY3.777
1566WDE|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY377
1576WDM|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)ELECTRON MICROSCOPY3.677
1586WDL|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)ELECTRON MICROSCOPY3.777
1596BU8|1|W70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.577
1605UYM|1|W70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.277
1616WD0|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY377
1625UYL|1|W70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.677
1635U4I|1|xStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.577
1645KPS|1|31Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.977
1655KPV|1|31Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)ELECTRON MICROSCOPY4.177
1665KPW|1|31Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.977
1675KPX|1|31Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.977
1684V5C|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.377
1694V5K|1|AVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1705F8K|1|2xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
1714ZER|1|2xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.176
1724ZER|1|1xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.176
1735F8K|1|1xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
1746UO1|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9576
1754W2H|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.776
1766ND5|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.676
1776ND6|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8576
1786O97|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-RAY DIFFRACTION2.7576
1796CAE|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
1806OF1|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-RAY DIFFRACTION2.876
1816N9F|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolutionX-RAY DIFFRACTION3.776
1826N9E|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolutionX-RAY DIFFRACTION3.776
1835WIT|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
1845W4K|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
1855WIS|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.776
1864Y4P|1|1xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.576
1875J4B|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.676
1885J4C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.876
1894W2F|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.476
1901VY6|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.976
1911VY7|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.876
1921VY4|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.676
1931VY5|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5576
1944W2G|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5576
1954WPO|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.876
1964WQY|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.876
1974V9R|1|AXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
1984V9S|1|AXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
1994W2I|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.776
2004Z3S|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6576
2015DOY|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.676
2025HAU|1|2wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION376
2035HAU|1|1wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION376
2045HCP|1|1xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8976
2055HCR|1|1xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
2065HD1|1|1xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.776
2075HCQ|1|1xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
2084Z8C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.976
2095HD1|1|2xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.776
2105HCR|1|2xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
2115HCP|1|2xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8976
2124Z8C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.976
2135HCQ|1|2xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.876
2144V8B|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
2154V87|1|CCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
2164V8C|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
2174V8C|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
2184V87|1|BCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
2194V8B|1|ACCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
2204V6G|1|CCInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
2216QNQ|1|2K70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.577
2226OXI|1|XVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-RAY DIFFRACTION3.4977
2236OTR|1|XVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
2246OXA|1|XVDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
2256OXI|1|QVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-RAY DIFFRACTION3.4977
2266OXA|1|QVDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
2276OTR|1|QVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
2286DNC|1|LAE.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonELECTRON MICROSCOPY3.777
2295U9F|1|W3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.277
2305EL4|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1577
2316GSK|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-RAY DIFFRACTION3.3677
2326GSJ|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.9677
2335IB8|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-RAY DIFFRACTION3.1377
2345IB7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9977
2355IBB|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9677
2364WQ1|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.177
2374WRO|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0577
2384WQR|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1577
2394WT1|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0577
2404WR6|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0577
2414WRA|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0577
2424WSD|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9577
2434WZO|1|2KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.377
2444V8F|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
2454V8D|1|ACStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
2464V8D|1|CCStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
2474V8F|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
2484V8E|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
2494V8E|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
2504WRA|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0577
2514WQR|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1577
2524WQ1|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.177
2534WR6|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0577
2544WSD|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9577
2554WT1|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0577
2564WRO|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0577
2574WZO|1|2LComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.377
2585EL4|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1576
2595EL7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1577
2606GSL|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-RAY DIFFRACTION3.1677
2615EL5|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1577
2625IBB|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9676
2635IB8|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-RAY DIFFRACTION3.1377
2645IB7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9977
2656GSK|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-RAY DIFFRACTION3.3677
2666GSJ|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.9677
2675E7K|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.277
2685EL6|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.177
2695EL5|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1577
2705E7K|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.277
2715EL7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1577
2725EL6|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.177
2736GSL|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-RAY DIFFRACTION3.1677
2745WFS|1|v70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY377
2755WDT|1|v70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY377
2765WFK|1|v70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.477
2775WF0|1|v70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)ELECTRON MICROSCOPY3.677
2785WE6|1|v70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.477
2795WE4|1|v70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.177
2805ZEU|1|vM. smegmatis P/P state 30S ribosomal subunitELECTRON MICROSCOPY3.777
2815ZEB|1|vM. Smegmatis P/P state 70S ribosome structureELECTRON MICROSCOPY3.477
2823J9Y|1|vCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.977
2835AFI|1|v2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.977
2845L3P|1|xCryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.777
2855ZEY|1|BM. smegmatis Trans-translation state 70S ribosomeELECTRON MICROSCOPY12.577
2865LZA|1|vStructure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)ELECTRON MICROSCOPY3.677
2875LZD|1|vStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.477
2885LZC|1|vStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)ELECTRON MICROSCOPY4.877
2895LZB|1|vStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)ELECTRON MICROSCOPY5.377
2906WNW|1|5Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAELECTRON MICROSCOPY3.277
2916OG7|1|570S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.375
2926OGF|1|570S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).ELECTRON MICROSCOPY3.973
2936BOH|1|IAAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.477
2946BOH|1|NCAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.477
2956B4V|1|IAAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.477
2966B4V|1|MCAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.477
2975U4J|1|x+ 5U4J|1|zStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.721
2986OFX|1|5Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.377
2996WDD|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.277
3006WDH|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1)ELECTRON MICROSCOPY4.377
3016WDI|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)ELECTRON MICROSCOPY477
3026WDB|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)ELECTRON MICROSCOPY477
3036WDC|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B)ELECTRON MICROSCOPY4.277
3046OGG|1|570S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).ELECTRON MICROSCOPY4.273
3056GXN|1|xCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)ELECTRON MICROSCOPY3.977
3066GXM|1|xCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)ELECTRON MICROSCOPY3.877
3076GWT|1|xCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)ELECTRON MICROSCOPY3.877
3084V71|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY2077
3095LMQ|1|ZStructure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, open form (state-2A)ELECTRON MICROSCOPY4.277
3105LMS|1|ZStructure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-2C)ELECTRON MICROSCOPY5.177
3116SWC|1|4IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiELECTRON MICROSCOPY3.376
3124V6G|1|CBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.565
3136QNQ|1|1K70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.565
3144WZO|1|1KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.370
3154V6Y|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY1277
3164V6Z|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY1277
3174V70|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY1777
3184V77|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY1777
3195KPW|1|32Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.977
3205KPX|1|32Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.977
3215KPS|1|32Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.977
3225KPV|1|32Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)ELECTRON MICROSCOPY4.177
3235WE4|1|w70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.177
3245WDT|1|w70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY377
3255WFS|1|w70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY377
3265WE6|1|w70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.477
3275WF0|1|w70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)ELECTRON MICROSCOPY3.677
3285WFK|1|w70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.477
3295AFI|1|w2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.977
3305ZEP|1|wM. smegmatis hibernating state 70S ribosome structureELECTRON MICROSCOPY3.477
3315UYM|1|X70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.277
3326BU8|1|X70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.577
3336WD0|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY377
3345UYL|1|X70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.677
3355UYK|1|X70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.977
3365UYN|1|X70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)ELECTRON MICROSCOPY477
3375UYP|1|X70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)ELECTRON MICROSCOPY3.977
3385UYQ|1|X70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)ELECTRON MICROSCOPY3.877
3395U9G|1|X3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.277
3405U9F|1|X3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.277
3416H58|1|wStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeELECTRON MICROSCOPY7.977
3426H58|1|wwStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeELECTRON MICROSCOPY7.977
3436H4N|1|wStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY377
3446Y69|1|wCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.8674
3456WDJ|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)ELECTRON MICROSCOPY3.777
3466WDB|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)ELECTRON MICROSCOPY477
3476WDD|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.277
3486WDI|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)ELECTRON MICROSCOPY477
3496WDH|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1)ELECTRON MICROSCOPY4.377
3506WDE|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY377
3516WDM|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)ELECTRON MICROSCOPY3.677
3526WDL|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)ELECTRON MICROSCOPY3.777
3536WDC|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B)ELECTRON MICROSCOPY4.277
3543J78|1|ETStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.377
3554V5F|1|CWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.677
3564V5F|1|AWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.677
3576C4I|1|yConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.2477
3585U4I|1|yStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.577
3594V87|1|BDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
3604V8B|1|ADCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
3614V8C|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
3624V8C|1|DDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
3634V87|1|CDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
3644V8B|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
3656QNQ|1|3K70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.577
3664V6G|1|CDInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
3674W4G|1|XWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
3684YPB|1|XWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
3696OXA|1|XWDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
3706OTR|1|XWDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
3714YPB|1|QWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
3724W4G|1|QWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
3736OXA|1|QWDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
3746OTR|1|QWDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
3756DNC|1|DE.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonELECTRON MICROSCOPY3.777
3765D8B|1|BDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
3775D8B|1|XCCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
3784V67|1|CZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
3794V67|1|AZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
3804V63|1|AZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
3814V63|1|CZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
3824V8Q|1|BWComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
3834V5K|1|CWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
3844V5K|1|AWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
3856QNQ|1|3L70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.577
3864V6G|1|ADInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
3876BOH|1|IBAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.477
3886BOH|1|DAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.477
3896B4V|1|HBAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.477
3906B4V|1|DAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.477
3915LMU|1|ZStructure of bacterial 30S-IF3-mRNA-tRNA translation pre-initiation complex, closed form (state-4)ELECTRON MICROSCOPY477
3925LMV|1|ZStructure of bacterial 30S-IF1-IF2-IF3-mRNA-tRNA translation pre-initiation complex(state-III)ELECTRON MICROSCOPY4.977
3936BZ7|1|XWThermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.X-RAY DIFFRACTION3.6876
3946BZ8|1|XWThermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A siteX-RAY DIFFRACTION3.7477
3956BZ8|1|QWThermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A siteX-RAY DIFFRACTION3.7477
3966BZ7|1|QWThermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.X-RAY DIFFRACTION3.6876
3975L4O|1|AStructure of an E.coli initiator tRNAfMet A1-U72 variantX-RAY DIFFRACTION2.876
3983CW6|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.377
3993CW5|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.177
4005JB3|1|4Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformationELECTRON MICROSCOPY5.3476
4013V11|1|DStructure of the ternary initiation complex AIF2:GDPNP:methionylated initiator TRNAX-RAY DIFFRACTION576
4024V76|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY1777
4034V75|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY1277
4044V73|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY1577
4054V78|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY2077
4064V6Q|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.577
4074V6R|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.577
4085LZF|1|vStructure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)ELECTRON MICROSCOPY4.677
4093JBO|1|7Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNAELECTRON MICROSCOPY5.875
4104BTC|1|VThermus thermophilus ribosomeX-RAY DIFFRACTION2.950
4114V8O|1|AVCrystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-RAY DIFFRACTION3.877
4124V6T|1|AXStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.377
4136OGI|1|570S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.474
4146WD1|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)ELECTRON MICROSCOPY3.377
4156WDF|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.377
4166WDG|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.377
4176GXO|1|xCryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)ELECTRON MICROSCOPY3.977
4183J77|1|PTStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)ELECTRON MICROSCOPY6.277
4194V72|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY1377
4204V74|1|A370S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY1777
4214V6P|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.577
4224V79|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY1577
4236SW9|1|4IC2A model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiELECTRON MICROSCOPY4.276
4245JBH|1|4Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-IN conformationELECTRON MICROSCOPY5.3476
4252FMT|1|DMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.877
4262FMT|1|CMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.877
4276O9K|1|y70S initiation complexELECTRON MICROSCOPY477
4283JCJ|1|vStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.777
4293JCN|1|vStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IELECTRON MICROSCOPY4.677
4305ME1|1|XStructure of the 30S Pre-Initiation Complex 2 (30S IC-2) Stalled by GE81112ELECTRON MICROSCOPY13.577
4315ME0|1|XStructure of the 30S Pre-Initiation Complex 1 (30S IC-1) Stalled by GE81112ELECTRON MICROSCOPY13.577
4326O7K|1|v30S initiation complexELECTRON MICROSCOPY4.277
4333QSY|1|DRecognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.277

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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