Equivalence class NR_20.0_38821.2 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9S3D|1|CP (rep) | Transfer RNA | prolyl-tRNA | Homo sapiens | Eukarya | RF00005 | NAC bound human RNC with 58 amino acid ARF1-linker | Electron microscopy | 2.32 | 75 | 2026-02-18 |
| 2 | 9S3B|1|CP | Transfer RNA | prolyl-tRNA | Homo sapiens | Eukarya | RF00005 | NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1 | Electron microscopy | 2.38 | 75 | 2026-02-18 |
| 3 | 9S3C|1|CP | Transfer RNA | prolyl-tRNA | Homo sapiens | Eukarya | RF00005 | NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2 | Electron microscopy | 2.42 | 75 | 2026-02-18 |
| 4 | 9I2D|1|CP | Transfer RNA | prolyl-tRNA | Homo sapiens | Eukarya | RF00005 | NMT1-NAC bound human RNC with 10 amino acid ARF1-linker | Electron microscopy | 2.19 | 75 | 2026-02-04 |
| 5 | 9QLO|1|CP | Transfer RNA | prolyl-tRNA | Homo sapiens | Eukarya | RF00005 | NMT1-NAC bound human RNC with full length ARF1 - State 1 | Electron microscopy | 2.47 | 75 | 2026-02-18 |
| 6 | 9QLQ|1|CP | Transfer RNA | prolyl-tRNA | Homo sapiens | Eukarya | RF00005 | NMT1-NAC bound human RNC with full length ARF1 - alternative State | Electron microscopy | 2.57 | 75 | 2026-02-18 |
| 7 | 9QLP|1|CP | Transfer RNA | prolyl-tRNA | Homo sapiens | Eukarya | RF00005 | NMT1-NAC bound human RNC with full length ARF1 - State 2 | Electron microscopy | 2.75 | 75 | 2026-02-18 |
| 8 | 9KZU|1|zy | Transfer RNA | mRNA, P-site tRNA | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3 | Electron microscopy | 3 | 75 | 2025-12-03 |
| 9 | 22TU|1|B4 | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | Human 80S ribosome in complex with DHX29 | Electron microscopy | 3 | 75 | 2026-04-01 |
| 10 | 22TU|1|C4 | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | Human 80S ribosome in complex with DHX29 | Electron microscopy | 3 | 75 | 2026-04-01 |
| 11 | 6IP5|1|zy | Transfer RNA | mRNA, P-site tRNA | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii) | Electron microscopy | 3.9 | 75 | 2019-05-29 |
| 12 | 6IP8|1|zy | Transfer RNA | mRNA, P-site tRNA | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv) | Electron microscopy | 3.9 | 75 | 2019-05-29 |
| 13 | 9KZX|1|zu | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3 | Electron microscopy | 3.3 | 72 | 2025-12-03 |
| 14 | 9KZX|1|zy | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3 | Electron microscopy | 3.3 | 75 | 2025-12-03 |
| 15 | 6IP5|1|zu | Transfer RNA | P-site tRNA | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii) | Electron microscopy | 3.9 | 75 | 2019-05-29 |
| 16 | 6IP6|1|zy | Transfer RNA | mRNA, P-site tRNA | Homo sapiens | Eukarya | RF00005 | Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii) | Electron microscopy | 4.5 | 75 | 2019-05-29 |
Release history
| Release | 4.33 |
|---|---|
| Date | 2026-04-01 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 22TU|1|C4 | Human 80S ribosome in complex with DHX29 | ELECTRON MICROSCOPY | 3 | 75 | |
| 2 | 6IP5|1|zu | Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii) | ELECTRON MICROSCOPY | 3.9 | 75 | |
| 3 | 9I2D|1|CP | NMT1-NAC bound human RNC with 10 amino acid ARF1-linker | ELECTRON MICROSCOPY | 2.19 | 75 | |
| 4 | 9S3B|1|CP | NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1 | ELECTRON MICROSCOPY | 2.38 | 75 | |
| 5 | 9S3C|1|CP | NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2 | ELECTRON MICROSCOPY | 2.42 | 75 | |
| 6 | 9S3D|1|CP | NAC bound human RNC with 58 amino acid ARF1-linker | ELECTRON MICROSCOPY | 2.32 | 75 | |
| 7 | 9QLP|1|CP | NMT1-NAC bound human RNC with full length ARF1 - State 2 | ELECTRON MICROSCOPY | 2.75 | 75 | |
| 8 | 9QLO|1|CP | NMT1-NAC bound human RNC with full length ARF1 - State 1 | ELECTRON MICROSCOPY | 2.47 | 75 | |
| 9 | 9QLQ|1|CP | NMT1-NAC bound human RNC with full length ARF1 - alternative State | ELECTRON MICROSCOPY | 2.57 | 75 | |
| 10 | 22TU|1|B4 | Human 80S ribosome in complex with DHX29 | ELECTRON MICROSCOPY | 3 | 75 | |
| 11 | 9KZU|1|zy | Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3 | ELECTRON MICROSCOPY | 3 | 75 | |
| 12 | 6IP6|1|zy | Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii) | ELECTRON MICROSCOPY | 4.5 | 75 | |
| 13 | 6IP5|1|zy | Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii) | ELECTRON MICROSCOPY | 3.9 | 75 | |
| 14 | 6IP8|1|zy | Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv) | ELECTRON MICROSCOPY | 3.9 | 75 | |
| 15 | 9KZX|1|zy | Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3 | ELECTRON MICROSCOPY | 3.3 | 75 | |
| 16 | 9KZX|1|zu | Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3 | ELECTRON MICROSCOPY | 3.3 | 72 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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