Equivalence class NR_20.0_44554.4 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9QF4|1|A1 (rep) | Small subunit ribosomal RNA | 16S rRNA | Pyrococcus furiosus | Archaea | RF01959 | Structure of P. furiosus 70S ribosome grown at 95 degC | Electron microscopy | 2.59 | 1490 | 2025-11-05 |
| 2 | 9QF6|1|A1 | Small subunit ribosomal RNA | 16S rRNA | Pyrococcus furiosus | Archaea | RF01959 | Structure of P. furiosus 70S ribosome in RsmB deleted strain | Electron microscopy | 2.67 | 1490 | 2025-11-05 |
| 3 | 9QF5|1|A1 | Small subunit ribosomal RNA | 16S rRNA | Pyrococcus furiosus | Archaea | RF01959 | Structure of P. furiosus 70S ribosome grown at 102deg | Electron microscopy | 2.84 | 1490 | 2025-11-05 |
| 4 | 9FNY|1|AA | Small subunit ribosomal RNA | 16S rRNA | Pyrococcus furiosus | Archaea | RF01959 | PF30S-PF30S dimer mediated by aRDF from P. furiosus (Structure I) | Electron microscopy | 3.2 | 1495 | 2025-01-15 |
| 5 | 9FO0|1|AA | Small subunit ribosomal RNA | 16S rRNA | Pyrococcus furiosus | Archaea | RF01959 | PF30S ribosomal subunit - control | Electron microscopy | 3.4 | 1495 | 2025-01-15 |
| 6 | 9FNZ|1|BA | Small subunit ribosomal RNA | 16S rRNA | Pyrococcus furiosus | Archaea | RF01959 | PF30S-PF30S dimer mediated by aRDF from P. furiosus (Structure II) | Electron microscopy | 3.2 | 1495 | 2025-01-15 |
| 7 | 9FNZ|1|AA | Small subunit ribosomal RNA | 16S rRNA | Pyrococcus furiosus | Archaea | RF01959 | PF30S-PF30S dimer mediated by aRDF from P. furiosus (Structure II) | Electron microscopy | 3.2 | 1495 | 2025-01-15 |
| 8 | 9FNY|1|BA | Small subunit ribosomal RNA | 16S rRNA | Pyrococcus furiosus | Archaea | RF01959 | PF30S-PF30S dimer mediated by aRDF from P. furiosus (Structure I) | Electron microscopy | 3.2 | 1495 | 2025-01-15 |
| 9 | 4V6U|1|A2 | Small subunit ribosomal RNA | 16S rRNA | Pyrococcus furiosus | Archaea | RF01959 | Promiscuous behavior of proteins in archaeal ribosomes revealed by cryo-EM: implications for evolution of eukaryotic ribosomes | Electron microscopy | 6.6 | 1495 | 2014-07-09 |
Release history
| Release | 4.12 |
|---|---|
| Date | 2025-11-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9QF5|1|A1 | Structure of P. furiosus 70S ribosome grown at 102deg | ELECTRON MICROSCOPY | 2.84 | 1490 | |
| 2 | 9QF4|1|A1 | Structure of P. furiosus 70S ribosome grown at 95 degC | ELECTRON MICROSCOPY | 2.59 | 1490 | |
| 3 | 9QF6|1|A1 | Structure of P. furiosus 70S ribosome in RsmB deleted strain | ELECTRON MICROSCOPY | 2.67 | 1490 | |
| 4 | 4V6U|1|A2 | Promiscuous behavior of proteins in archaeal ribosomes revealed by cryo-EM: implications for evolution of eukaryotic ribosomes | ELECTRON MICROSCOPY | 6.6 | 1495 | |
| 5 | 9FO0|1|AA | PF30S ribosomal subunit - control | ELECTRON MICROSCOPY | 3.4 | 1495 | |
| 6 | 9FNZ|1|BA | PF30S-PF30S dimer mediated by aRDF from P. furiosus (Structure II) | ELECTRON MICROSCOPY | 3.2 | 1495 | |
| 7 | 9FNY|1|BA | PF30S-PF30S dimer mediated by aRDF from P. furiosus (Structure I) | ELECTRON MICROSCOPY | 3.2 | 1495 | |
| 8 | 9FNY|1|AA | PF30S-PF30S dimer mediated by aRDF from P. furiosus (Structure I) | ELECTRON MICROSCOPY | 3.2 | 1495 | |
| 9 | 9FNZ|1|AA | PF30S-PF30S dimer mediated by aRDF from P. furiosus (Structure II) | ELECTRON MICROSCOPY | 3.2 | 1495 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: