Equivalence class NR_20.0_49241.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1FFY|1|T (rep) | ISOLEUCYL-TRNA | INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN | X-ray diffraction | 2.2 | 2000-08-07 | ||||
| 2 | 7B5K|1|x | Transfer RNA | mRNA, P-site Isoleucine tRNA (77-MER) | Escherichia coli K-12 | Bacteria | RF00005 | E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain. | Electron microscopy | 2.9 | 2021-05-26 |
| 3 | 8ZYC|1|C | Transfer RNA | tRNAIleGAU | Escherichia coli | Bacteria | RF00005 | Cryo-EM structure of uropathogenic Escherichia coli CysK:CdiA:tRNA complex A | Electron microscopy | 2.99 | 2024-08-21 |
| 4 | 8ZYD|1|C | Transfer RNA | tRNAIleGAU | Escherichia coli | Bacteria | RF00005 | Cryo-EM structure of uropathogenic Escherichia coli CysK:CdiA:tRNA complex B | Electron microscopy | 3.04 | 2024-08-21 |
| 5 | 5O2R|1|x | Transfer RNA | mRNA, P-site Ile-tRNA | Escherichia coli | Bacteria | RF00005 | Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome | Electron microscopy | 3.4 | 2017-07-26 |
| 6 | 5KCS|1|1x | Transfer RNA | mRNA, P-site tRNA | Escherichia coli | Bacteria | RF00005 | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution | Electron microscopy | 3.9 | 2016-08-17 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 5O2R|1|x | Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome | ELECTRON MICROSCOPY | 3.4 | 77 | |
| 2 | 5KCS|1|1x | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution | ELECTRON MICROSCOPY | 3.9 | 69 | |
| 3 | 7B5K|1|x | E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain. | ELECTRON MICROSCOPY | 2.9 | 77 | |
| 4 | 8ZYD|1|C | Cryo-EM structure of uropathogenic Escherichia coli CysK:CdiA:tRNA complex B | ELECTRON MICROSCOPY | 3.04 | 77 | |
| 5 | 8ZYC|1|C | Cryo-EM structure of uropathogenic Escherichia coli CysK:CdiA:tRNA complex A | ELECTRON MICROSCOPY | 2.99 | 77 | |
| 6 | 1FFY|1|T | INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN | X-RAY DIFFRACTION | 2.2 | 75 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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