#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
18QYX|1|B2 (rep)5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human 60S ribosomal subunitElectron microscopy1.781192024-12-11
28GLP|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)Electron microscopy1.671202023-04-19
39C3H|1|L95S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.Electron microscopy21202024-12-04
48A3D|1|B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human mature large subunit of the ribosome with eIF6 and homoharringtonine boundElectron microscopy1.671202023-03-08
58QFD|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001UFL1 E3 ligase bound 60S ribosomeElectron microscopy2.21192024-02-21
68YOO|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with 100 um TigecyclineElectron microscopy21202024-07-10
78QOI|1|L75S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNAElectron microscopy1.91202024-06-12
88JDK|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)Electron microscopy2.261202023-12-06
98G5Y|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)Electron microscopy2.291202023-04-19
108YOP|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with 4 um TigecyclineElectron microscopy2.21202024-07-10
118JDJ|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)Electron microscopy2.51202023-12-06
128JDL|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)Electron microscopy2.421202023-12-06
138K2C|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with TigecyclineElectron microscopy2.41202024-07-10
149GUL|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complexElectron microscopy2.21202025-09-24
158XSX|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2Electron microscopy2.41202024-07-10
167XNY|1|L25S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cellsElectron microscopy2.51202023-04-05
178G60|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)Electron microscopy2.541202023-04-19
186ZMI|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexElectron microscopy2.61202020-08-19
198FLE|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State L2)Electron microscopy2.481202023-07-12
208JDM|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)Electron microscopy2.671202023-12-06
217OW7|1|B5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001EIF6-bound large subunit of the human ribosomeElectron microscopy2.21202022-10-05
227XNX|1|L25S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cellsElectron microscopy2.71202023-04-05
238G5Z|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)Electron microscopy2.641202023-04-19
249B0H|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating class5 80S ribosomeElectron microscopy2.591202025-03-19
259B0G|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating class4 80S ribosomeElectron microscopy2.571202025-03-19
268FLB|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State K2)Electron microscopy2.551202023-07-12
278IFD|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Dibekacin-added human 80S ribosomeElectron microscopy2.591202024-02-14
288FL7|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State J2)Electron microscopy2.551202023-07-12
298FLD|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State L1)Electron microscopy2.581202023-07-12
308UJB|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human 80S ribosome with EBP1 (consensus map)Electron microscopy2.671202025-04-30
319B0W|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human eEF2-A/P-P/E state 80S ribosomeElectron microscopy2.661202025-04-30
328FLF|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State L3)Electron microscopy2.651202023-07-12
336ZM7|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexElectron microscopy2.71202020-07-29
348FL6|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State J1)Electron microscopy2.621202023-07-12
358FLA|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State K1)Electron microscopy2.631202023-07-12
368IFE|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Arbekacin-added human 80S ribosomeElectron microscopy2.571202024-02-14
378OJ5|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)Electron microscopy2.91202024-02-21
389RPV|1|M75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of the ZAK-bound human disomeElectron microscopy2.351202025-12-10
397F5S|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human delta-METTL18 60S ribosomeElectron microscopy2.721202022-06-22
409B11|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human unrotated hibernating without CCDC124 state 80S ribosomeElectron microscopy2.771202025-04-30
416Y6X|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Tetracenomycin X bound to the human ribosomeElectron microscopy2.81202020-07-08
428UJC|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human 60S ribosomeElectron microscopy2.871202025-04-16
439AZS|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Post-eEF1A-AT-P-E state 80S ribosomeElectron microscopy2.81202025-04-30
448FLC|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State K3)Electron microscopy2.761202023-07-12
458FL9|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State J3)Electron microscopy2.751202023-07-12
469B0F|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Hibernating class3 80S ribosomeElectron microscopy2.781202025-03-19
479RPV|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of the ZAK-bound human disomeElectron microscopy2.351202025-12-10
488G6J|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)Electron microscopy2.81202023-04-19
499B0J|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human unrotated hibernating with CCDC124 state 80S ribosomeElectron microscopy2.841202025-04-30
509B0O|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Post-eEF1A-A/T-P-Z state 80S ribosomeElectron microscopy2.831202025-04-30
519B0R|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human hibernating class2 80S ribosomeElectron microscopy2.811202025-03-19
528FL3|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State I2)Electron microscopy2.531172023-07-12
539B0P|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human Hibernating class1 80S ribosomeElectron microscopy2.821202025-03-19
548G61|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)Electron microscopy2.941202023-04-19
556QZP|1|L75S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001High-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.91202019-04-24
568FL2|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State I1)Electron microscopy2.671172023-07-12
579GMO|1|B5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16Electron microscopy2.591182024-10-02
586ZME|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexElectron microscopy31202020-08-12
598XSY|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)Electron microscopy31202024-07-10
609B0N|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human Post-eEF1A-AT-P state 80S ribosomeElectron microscopy2.921202025-04-30
618UJD|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human 60S ribosome with eIF6Electron microscopy2.961202025-04-16
626ZMO|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexElectron microscopy3.11202020-08-19
639GY4|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)Electron microscopy31202025-05-14
648Y0X|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Dormant ribosome with SERBP1Electron microscopy3.31202024-02-07
658OHD|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)Electron microscopy3.11202024-02-21
666LQM|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a pre-60S ribosomal subunit - state CElectron microscopy3.091202020-08-26
676OLE|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsElectron microscopy3.11192019-06-19
689AZN|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human A/P-P/E state 80S ribosomeElectron microscopy2.981202025-04-30
698UIZ|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human P-E state 80S ribosomeElectron microscopy3.431202025-04-09
706Y2L|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome in POST stateElectron microscopy31202020-04-15
718UIK|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ HHT and CHX treated human 80S ribosome with EBP1 (consensus map)Electron microscopy2.961202025-04-30
728Y0W|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001dormant ribosome with eIF5A, eEF2 and SERBP1Electron microscopy3.41202024-02-07
736OM0|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsElectron microscopy3.11192019-06-19
746XA1|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of a drug-like compound stalled human translation termination complexElectron microscopy2.81202020-10-07
758IDT|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State GElectron microscopy2.81202023-08-09
766Z6M|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1Electron microscopy3.11202020-07-29
777QVP|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy31202022-10-12
788FL4|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nuclear pre-60S ribosomal subunit (State I3)Electron microscopy2.891172023-07-12
799G8M|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001human 80S ribosome bound by a SKI2-exosome complexElectron microscopy3.31202024-10-23
808XSZ|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNAElectron microscopy3.21202024-07-10
819KZU|1|L75S ribosomal RNA5S_ribosomal_RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3Electron microscopy31202025-12-03
826LSR|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a pre-60S ribosomal subunit - state BElectron microscopy3.131202020-08-26
839N9J|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory transloconElectron microscopy3.21202025-11-19
848UKB|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ HHT and CHX treated human hibernating state without E-tRNA 80S ribosomeElectron microscopy3.051202024-11-20
856LU8|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a human pre-60S ribosomal subunit - state AElectron microscopy3.131202020-08-26
868UIY|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human P-Z state 80S ribosomeElectron microscopy3.441202025-04-09
876Y0G|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of human ribosome in classical-PRE stateElectron microscopy3.21202020-04-15
888OJ8|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)Electron microscopy3.31202024-02-21
899KZX|1|L75S ribosomal RNA5S_ribosomal_RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3Electron microscopy3.31202025-12-03
907QVP|1|L95S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy31202022-10-12
918OJ0|1|75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF0000160S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)Electron microscopy3.31202024-02-21
928INF|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State F'Electron microscopy31202023-08-09
936LSS|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a pre-60S ribosomal subunit - state preAElectron microscopy3.231202020-08-26
948IDY|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State FElectron microscopy31202023-08-09
957BHP|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human Ebp1 - 80S ribosomeElectron microscopy3.31202021-02-03
969B0S|1|l75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human top-top di-ribosome structure (Composite map)Electron microscopy3.81202025-03-19
976Y57|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome in hybrid-PRE stateElectron microscopy3.51202020-04-15
989SYR|1|L25S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatDElectron microscopy3.551182025-12-17
999B0Q|1|l75S ribosomal RNARNA (120-MER)5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human top-back di-ribosome structure (Composite map)Electron microscopy3.21202025-03-19
1006OLI|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)Electron microscopy3.51192019-06-19
1014UG0|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001STRUCTURE OF THE HUMAN 80S RIBOSOMEElectron microscopy3.61202015-06-10
1029QIW|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human pre-60S - State 3Electron microscopy3.041202025-04-30
1038UJ9|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human P state 80S ribosomeElectron microscopy3.641202025-04-16
1048UJJ|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ HHT and CHX treated A-P state 80S ribosomeElectron microscopy3.561202025-04-16
1058UJK|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ HHT and CHX treated A-P-Z state 80S ribosomeElectron microscopy3.541202025-04-16
1068INE|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State G'Electron microscopy3.21202023-08-09
1075T2C|1|B5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001CryoEM structure of the human ribosome at 3.6 Angstrom resolutionElectron microscopy3.61202017-01-25
1089B0Q|1|L75S ribosomal RNARNA (120-MER)5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human top-back di-ribosome structure (Composite map)Electron microscopy3.21202025-03-19
1098RL2|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human pre-60S - State 5Electron microscopy2.841202025-01-15
1108FL0|1|L45S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Human nucleolar pre-60S ribosomal subunit (State H)Electron microscopy2.911202023-07-12
1116OLG|1|A45S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)Electron microscopy3.41192019-06-19
1129B0S|1|L75S ribosomal RNA5S rRNA [Homo sapiens]Homo sapiensEukaryaRF00001In situ human top-top di-ribosome structure (Composite map)Electron microscopy3.81202025-03-19
1136IP5|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)Electron microscopy3.91202019-05-29
1145LKS|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure-function insights reveal the human ribosome as a cancer target for antibioticsElectron microscopy3.61202017-04-26
1156IP8|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)Electron microscopy3.91202019-05-29
1166OLF|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsElectron microscopy3.91192019-06-19
1176OLZ|1|A45S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAElectron microscopy3.91192019-06-19
1186W6L|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human ribosome-TMCO1 transloconElectron microscopy3.841192020-09-02
1198IE3|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State EElectron microscopy3.31202023-08-09
1208INK|1|35S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State DElectron microscopy3.21152023-08-09
1218IPY|1|35S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State D'Electron microscopy3.21152023-08-09
1228IPD|1|35S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State CElectron microscopy3.21152023-08-09
1236OM7|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsElectron microscopy3.71192019-06-19
1248IR1|1|W5S ribosomal RNA5S RNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State AElectron microscopy3.31202023-08-09
1254V6X|1|A75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the human 80S ribosomeElectron microscopy51212014-07-09
1268IR3|1|55S ribosomal RNA5S RNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State B'Electron microscopy3.51202023-08-09
1276IP6|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)Electron microscopy4.51202019-05-29
1289AZC|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001In situ human 80S ribosome (Consensus map)Electron microscopy2.191202025-04-30
1298IPX|1|35S ribosomal RNA5S RNAHomo sapiensEukaryaRF00001human nuclear pre-60S ribosomal particle - State C'Electron microscopy4.31152023-08-09
1305AJ0|1|A45S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo electron microscopy of actively translating human polysomes (POST state).Electron microscopy3.51192015-05-20
1316Z6N|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)Electron microscopy2.91202020-07-29
1326Z6L|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human CCDC124 bound to 80S ribosomesElectron microscopy31202020-07-29

Release history

Release4.18
Date2025-12-17

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
14V6X|1|A7Structure of the human 80S ribosomeELECTRON MICROSCOPY5121
25LKS|1|L7Structure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.6120
36IP8|1|1BCryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.9120
49KZU|1|L7Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3ELECTRON MICROSCOPY3120
56IP5|1|1BCryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.9120
66IP6|1|1BCryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)ELECTRON MICROSCOPY4.5120
79KZX|1|L7Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3ELECTRON MICROSCOPY3.3120
85T2C|1|BCryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.6120
94UG0|1|L7STRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.6120
108IFE|1|1BArbekacin-added human 80S ribosomeELECTRON MICROSCOPY2.57120
118IFD|1|1BDibekacin-added human 80S ribosomeELECTRON MICROSCOPY2.59120
129RPV|1|L7Structure of the ZAK-bound human disomeELECTRON MICROSCOPY2.35120
137QVP|1|L9Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY3120
146Y57|1|L7Structure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.5120
156Y0G|1|L7Structure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.2120
166Y2L|1|L7Structure of human ribosome in POST stateELECTRON MICROSCOPY3120
177QVP|1|L7Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY3120
188G60|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)ELECTRON MICROSCOPY2.54120
198G5Y|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)ELECTRON MICROSCOPY2.29120
208GLP|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)ELECTRON MICROSCOPY1.67120
218G6J|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2)ELECTRON MICROSCOPY2.8120
228G5Z|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)ELECTRON MICROSCOPY2.64120
238G61|1|L7mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)ELECTRON MICROSCOPY2.94120
249C3H|1|L9Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.ELECTRON MICROSCOPY2120
259RPV|1|M7Structure of the ZAK-bound human disomeELECTRON MICROSCOPY2.35120
268OHD|1|760S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)ELECTRON MICROSCOPY3.1120
278OJ8|1|760S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)ELECTRON MICROSCOPY3.3120
288OJ0|1|760S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)ELECTRON MICROSCOPY3.3120
299GY4|1|760S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)ELECTRON MICROSCOPY3120
309GMO|1|BeIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16ELECTRON MICROSCOPY2.59118
318UIY|1|L7In situ human P-Z state 80S ribosomeELECTRON MICROSCOPY3.44120
329B0J|1|L7In situ human unrotated hibernating with CCDC124 state 80S ribosomeELECTRON MICROSCOPY2.84120
339B11|1|L7In situ human unrotated hibernating without CCDC124 state 80S ribosomeELECTRON MICROSCOPY2.77120
348UIZ|1|L7In situ human P-E state 80S ribosomeELECTRON MICROSCOPY3.43120
359AZS|1|L7In situ human Post-eEF1A-AT-P-E state 80S ribosomeELECTRON MICROSCOPY2.8120
369AZC|1|L7In situ human 80S ribosome (Consensus map)ELECTRON MICROSCOPY2.19120
378UJB|1|L7In situ human 80S ribosome with EBP1 (consensus map)ELECTRON MICROSCOPY2.67120
388UJC|1|L7In situ human 60S ribosomeELECTRON MICROSCOPY2.87120
398UJD|1|L7In situ human 60S ribosome with eIF6ELECTRON MICROSCOPY2.96120
409B0G|1|L7In situ human Hibernating class4 80S ribosomeELECTRON MICROSCOPY2.57120
419B0H|1|L7In situ human Hibernating class5 80S ribosomeELECTRON MICROSCOPY2.59120
429B0R|1|L7In situ human hibernating class2 80S ribosomeELECTRON MICROSCOPY2.81120
439B0P|1|L7In situ human Hibernating class1 80S ribosomeELECTRON MICROSCOPY2.82120
449B0F|1|L7In situ human Hibernating class3 80S ribosomeELECTRON MICROSCOPY2.78120
459B0O|1|L7In situ human Post-eEF1A-A/T-P-Z state 80S ribosomeELECTRON MICROSCOPY2.83120
469B0N|1|L7In situ human Post-eEF1A-AT-P state 80S ribosomeELECTRON MICROSCOPY2.92120
478UKB|1|L7In situ HHT and CHX treated human hibernating state without E-tRNA 80S ribosomeELECTRON MICROSCOPY3.05120
488UIK|1|L7In situ HHT and CHX treated human 80S ribosome with EBP1 (consensus map)ELECTRON MICROSCOPY2.96120
498UJ9|1|L7In situ human P state 80S ribosomeELECTRON MICROSCOPY3.64120
506Y6X|1|L7Tetracenomycin X bound to the human ribosomeELECTRON MICROSCOPY2.8120
518XSX|1|L7Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2ELECTRON MICROSCOPY2.4120
528YOP|1|L7Cryo-EM structure of the human 80S ribosome with 4 um TigecyclineELECTRON MICROSCOPY2.2120
538YOO|1|L7Cryo-EM structure of the human 80S ribosome with 100 um TigecyclineELECTRON MICROSCOPY2120
548QYX|1|B2Human 60S ribosomal subunitELECTRON MICROSCOPY1.78119
558XSZ|1|L7Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNAELECTRON MICROSCOPY3.2120
568XSY|1|L7Cryo-EM structure of the human 80S ribosome with Tigecycline, e-tRNA and CCDC124 (40S head Swivelled)ELECTRON MICROSCOPY3120
578K2C|1|L7Cryo-EM structure of the human 80S ribosome with TigecyclineELECTRON MICROSCOPY2.4120
588A3D|1|BHuman mature large subunit of the ribosome with eIF6 and homoharringtonine boundELECTRON MICROSCOPY1.67120
598QOI|1|L7Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNAELECTRON MICROSCOPY1.9120
607F5S|1|L7human delta-METTL18 60S ribosomeELECTRON MICROSCOPY2.72120
618UJJ|1|L7In situ HHT and CHX treated A-P state 80S ribosomeELECTRON MICROSCOPY3.56120
628UJK|1|L7In situ HHT and CHX treated A-P-Z state 80S ribosomeELECTRON MICROSCOPY3.54120
639B0S|1|L7In situ human top-top di-ribosome structure (Composite map)ELECTRON MICROSCOPY3.8120
649B0Q|1|L7In situ human top-back di-ribosome structure (Composite map)ELECTRON MICROSCOPY3.2120
659B0Q|1|l7In situ human top-back di-ribosome structure (Composite map)ELECTRON MICROSCOPY3.2120
669B0S|1|l7In situ human top-top di-ribosome structure (Composite map)ELECTRON MICROSCOPY3.8120
679B0W|1|L7In situ human eEF2-A/P-P/E state 80S ribosomeELECTRON MICROSCOPY2.66120
689AZN|1|L7In situ human A/P-P/E state 80S ribosomeELECTRON MICROSCOPY2.98120
696QZP|1|L7High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.9120
706XA1|1|L7Structure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.8120
716LQM|1|5Cryo-EM structure of a pre-60S ribosomal subunit - state CELECTRON MICROSCOPY3.09120
728Y0X|1|L7Dormant ribosome with SERBP1ELECTRON MICROSCOPY3.3120
738Y0W|1|L7dormant ribosome with eIF5A, eEF2 and SERBP1ELECTRON MICROSCOPY3.4120
748QFD|1|7UFL1 E3 ligase bound 60S ribosomeELECTRON MICROSCOPY2.2119
758JDL|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)ELECTRON MICROSCOPY2.42120
768JDJ|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)ELECTRON MICROSCOPY2.5120
778JDK|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)ELECTRON MICROSCOPY2.26120
788JDM|1|EStructure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)ELECTRON MICROSCOPY2.67120
799SYR|1|L2Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatDELECTRON MICROSCOPY3.55118
808OJ5|1|760S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)ELECTRON MICROSCOPY2.9120
817XNX|1|L2High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cellsELECTRON MICROSCOPY2.7120
827XNY|1|L2High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cellsELECTRON MICROSCOPY2.5120
836ZME|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY3120
846ZMO|1|L7SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.1120
856ZM7|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.7120
866ZMI|1|L7SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.6120
876Z6M|1|L7Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1ELECTRON MICROSCOPY3.1120
886Z6N|1|L7Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.9120
896Z6L|1|L7Cryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY3120
907OW7|1|BEIF6-bound large subunit of the human ribosomeELECTRON MICROSCOPY2.2120
916OM0|1|EHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.1119
926OLE|1|EHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.1119
936OLI|1|EStructure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.5119
946OM7|1|EHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.7119
956OLF|1|EHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.9119
966OLZ|1|A4Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.9119
976OLG|1|A4Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.4119
985AJ0|1|A4Cryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.5119
997BHP|1|L7Cryo-EM structure of the human Ebp1 - 80S ribosomeELECTRON MICROSCOPY3.3120
1006W6L|1|ECryo-EM structure of the human ribosome-TMCO1 transloconELECTRON MICROSCOPY3.84119
1019N9J|1|L7Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory transloconELECTRON MICROSCOPY3.2120
1029GUL|1|L7Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complexELECTRON MICROSCOPY2.2120
1039G8M|1|L7human 80S ribosome bound by a SKI2-exosome complexELECTRON MICROSCOPY3.3120
1048IE3|1|5human nuclear pre-60S ribosomal particle - State EELECTRON MICROSCOPY3.3120
1056LSR|1|5Cryo-EM structure of a pre-60S ribosomal subunit - state BELECTRON MICROSCOPY3.13120
1066LSS|1|5Cryo-EM structure of a pre-60S ribosomal subunit - state preAELECTRON MICROSCOPY3.23120
1076LU8|1|5Cryo-EM structure of a human pre-60S ribosomal subunit - state AELECTRON MICROSCOPY3.13120
1088FLD|1|L4Human nuclear pre-60S ribosomal subunit (State L1)ELECTRON MICROSCOPY2.58120
1098FLE|1|L4Human nuclear pre-60S ribosomal subunit (State L2)ELECTRON MICROSCOPY2.48120
1108FLF|1|L4Human nuclear pre-60S ribosomal subunit (State L3)ELECTRON MICROSCOPY2.65120
1118FL9|1|L4Human nuclear pre-60S ribosomal subunit (State J3)ELECTRON MICROSCOPY2.75120
1128FL6|1|L4Human nuclear pre-60S ribosomal subunit (State J1)ELECTRON MICROSCOPY2.62120
1138FL7|1|L4Human nuclear pre-60S ribosomal subunit (State J2)ELECTRON MICROSCOPY2.55120
1148FLC|1|L4Human nuclear pre-60S ribosomal subunit (State K3)ELECTRON MICROSCOPY2.76120
1158FLB|1|L4Human nuclear pre-60S ribosomal subunit (State K2)ELECTRON MICROSCOPY2.55120
1168FLA|1|L4Human nuclear pre-60S ribosomal subunit (State K1)ELECTRON MICROSCOPY2.63120
1178IDT|1|5human nuclear pre-60S ribosomal particle - State GELECTRON MICROSCOPY2.8120
1188IDY|1|5human nuclear pre-60S ribosomal particle - State FELECTRON MICROSCOPY3120
1198INF|1|5human nuclear pre-60S ribosomal particle - State F'ELECTRON MICROSCOPY3120
1208INE|1|5human nuclear pre-60S ribosomal particle - State G'ELECTRON MICROSCOPY3.2120
1218IR1|1|Whuman nuclear pre-60S ribosomal particle - State AELECTRON MICROSCOPY3.3120
1228IR3|1|5human nuclear pre-60S ribosomal particle - State B'ELECTRON MICROSCOPY3.5120
1238FL0|1|L4Human nucleolar pre-60S ribosomal subunit (State H)ELECTRON MICROSCOPY2.91120
1248RL2|1|L7Human pre-60S - State 5ELECTRON MICROSCOPY2.84120
1259QIW|1|L7Human pre-60S - State 3ELECTRON MICROSCOPY3.04120
1268FL4|1|L4Human nuclear pre-60S ribosomal subunit (State I3)ELECTRON MICROSCOPY2.89117
1278FL3|1|L4Human nuclear pre-60S ribosomal subunit (State I2)ELECTRON MICROSCOPY2.53117
1288FL2|1|L4Human nuclear pre-60S ribosomal subunit (State I1)ELECTRON MICROSCOPY2.67117
1298IPD|1|3human nuclear pre-60S ribosomal particle - State CELECTRON MICROSCOPY3.2115
1308INK|1|3human nuclear pre-60S ribosomal particle - State DELECTRON MICROSCOPY3.2115
1318IPY|1|3human nuclear pre-60S ribosomal particle - State D'ELECTRON MICROSCOPY3.2115
1328IPX|1|3human nuclear pre-60S ribosomal particle - State C'ELECTRON MICROSCOPY4.3115

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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