Equivalence class NR_20.0_57834.5 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7QTT|1|d+ 7QTT|1|f (rep) | U6 spliceosomal RNA + U2 splicesomal small nuclear RNA | MINX, U2snRNA, U6snRNA | Homo sapiens | Eukarya | RF00026 + RF00004 | Structural organization of a late activated human spliceosome (Baqr, core region) | Electron microscopy | 3.1 | 96 | 2023-05-10 |
| 2 | 9J8P|1|B | U6 spliceosomal RNA | U6 snRNA | Homo sapiens | Eukarya | RF00026 | Cryo-EM structure of human TUT1 complexed with U6 snRNA | Electron microscopy | 3.21 | 106 | 2025-01-01 |
| 3 | 8Q7N|1|6 | U6 spliceosomal RNA | U6 snRNA | Homo sapiens | Eukarya | RF00026 | cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region) | Electron microscopy | 3.1 | 78 | 2024-01-24 |
| 4 | 6FF4|1|6 | U6 spliceosomal RNA | pre mRNA, U2 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00026 | human Bact spliceosome core structure | Electron microscopy | 3.4 | 95 | 2018-08-29 |
| 5 | 6ID0|1|F+ 6ID0|1|H | U6 spliceosomal RNA + U2 splicesomal small nuclear RNA | pre-mRNA, U2snRNA, U6snRNA | Homo sapiens | Eukarya | RF00026 + RF00004 | Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9 angstrom resolution | Electron microscopy | 2.9 | 153 | 2019-03-13 |
| 6 | 7ABF|1|6 | U6 spliceosomal RNA | MINX M3 RNA, U6 small nuclear RNA | Homo sapiens | Eukarya | RF00026 | Human pre-Bact-1 spliceosome core structure | Electron microscopy | 3.9 | 65 | 2020-12-09 |
| 7 | 7AAV|1|6 | U6 spliceosomal RNA | MINX M3 pre-mRNA, U2 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00026 | Human pre-Bact-2 spliceosome core structure | Electron microscopy | 4.2 | 73 | 2020-12-09 |
| 8 | 6FF7|1|6 | U6 spliceosomal RNA | pre-mRNA, U2 snRNA, U6 snRNA | Homo sapiens | Eukarya | RF00026 | human Bact spliceosome core structure | Electron microscopy | 4.5 | 95 | 2019-03-13 |
| 9 | 8QO9|1|6 | U6 spliceosomal RNA | U6 snRNA | Homo sapiens | Eukarya | RF00026 | Cryo-EM structure of a human spliceosomal B complex protomer | Electron microscopy | 5.29 | 94 | 2024-01-24 |
| 10 | 3JCR|1|N | U6 spliceosomal RNA | U6 snRNA | Homo sapiens | Eukarya | RF00026 | 3D structure determination of the human*U4/U6.U5* tri-snRNP complex | Electron microscopy | 7 | 37 | 2016-03-09 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9J8P|1|B | Cryo-EM structure of human TUT1 complexed with U6 snRNA | ELECTRON MICROSCOPY | 3.21 | 106 | |
| 2 | 7AAV|1|6 | Human pre-Bact-2 spliceosome core structure | ELECTRON MICROSCOPY | 4.2 | 73 | |
| 3 | 7ABF|1|6 | Human pre-Bact-1 spliceosome core structure | ELECTRON MICROSCOPY | 3.9 | 65 | |
| 4 | 6ID0|1|F+ 6ID0|1|H | Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9 angstrom resolution | ELECTRON MICROSCOPY | 2.9 | 153 | |
| 5 | 6FF7|1|6 | human Bact spliceosome core structure | ELECTRON MICROSCOPY | 4.5 | 95 | |
| 6 | 6FF4|1|6 | human Bact spliceosome core structure | ELECTRON MICROSCOPY | 3.4 | 95 | |
| 7 | 7QTT|1|d+ 7QTT|1|f | Structural organization of a late activated human spliceosome (Baqr, core region) | ELECTRON MICROSCOPY | 3.1 | 96 | |
| 8 | 8Q7N|1|6 | cryo-EM structure of the human spliceosomal B complex protomer (tri-snRNP core region) | ELECTRON MICROSCOPY | 3.1 | 78 | |
| 9 | 8QO9|1|6 | Cryo-EM structure of a human spliceosomal B complex protomer | ELECTRON MICROSCOPY | 5.29 | 94 | |
| 10 | 3JCR|1|N | 3D structure determination of the human*U4/U6.U5* tri-snRNP complex | ELECTRON MICROSCOPY | 7 | 37 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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