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Equivalence class NR_20.0_58155.3 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
19G6J|1|1+ 9G6J|1|4 (rep)Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNACandida albicans SC5314EukaryaRF02543 + RF00002The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNAElectron microscopy2.1532222025-04-23
29G30|1|1+ 9G30|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNACandida albicansEukaryaRF02543 + RF00002The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) shows strong density for the A site tRNAElectron microscopy2.3532222025-04-23
38Q5I|1|1+ 8Q5I|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNACandida albicansEukaryaRF02543 + RF00002Structure of Candida albicans 80S ribosome in complex with cephaelineElectron microscopy2.4532312023-09-13
49G1Z|1|1+ 9G1Z|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNACandida albicans SC5314EukaryaRF02543 + RF00002Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)Electron microscopy3.133032025-04-23
58OI5|1|1+ 8OI5|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)X-ray diffraction2.933272024-10-09
68CRE|1|1+ 8CRE|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418X-ray diffraction333732024-09-18
78CRE|1|AS+ 8CRE|1|AULarge subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418X-ray diffraction333872024-09-18
88CQ7|1|1+ 8CQ7|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of phyllanthoside bound to the Candida albicans 80S ribosomeX-ray diffraction3.233732024-09-11
98OI5|1|AS+ 8OI5|1|AULarge subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)X-ray diffraction2.932212024-10-09
108OEQ|1|1+ 8OEQ|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNACandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)X-ray diffraction3.333742024-09-25
118OEQ|1|AS+ 8OEQ|1|AULarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNACandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)X-ray diffraction3.333572024-09-25
128CQ7|1|AS+ 8CQ7|1|AULarge subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of phyllanthoside bound to the Candida albicans 80S ribosomeX-ray diffraction3.233802024-09-11
138C3A|1|1+ 8C3A|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of ailanthone bound to the Candida albicans 80S ribosomeX-ray diffraction333742024-01-10
148OJ3|1|1+ 8OJ3|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNACandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418 (rotated state)X-ray diffraction3.533742024-10-09
158CQW|1|1+ 8CQW|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin BX-ray diffraction3.0533652024-09-18
168C3A|1|AS+ 8C3A|1|AULarge subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of ailanthone bound to the Candida albicans 80S ribosomeX-ray diffraction333872024-01-10
178CQW|1|AS+ 8CQW|1|AULarge subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin BX-ray diffraction3.0533842024-09-18
188OGJ|1|1+ 8OGJ|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNACandida albicansEukaryaRF02543 + RF00002Structure of Candida albicans 80S ribosome in complex with mefloquineElectron microscopy3.132842024-10-02
198OJ3|1|AS+ 8OJ3|1|AULarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNACandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418 (rotated state)X-ray diffraction3.532592024-10-09
208OH6|1|1+ 8OH6|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S (gene name XR_002086444.1), 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (500umol)X-ray diffraction3.3533762024-10-02
218OH6|1|AS+ 8OH6|1|AULarge subunit ribosomal RNA + 5.8S ribosomal RNA25S (gene name XR_002086444.1), 5.8SCandida albicansEukaryaRF02543 + RF00002Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (500umol)X-ray diffraction3.3532172024-10-02
227Q08|1|1+ 7Q08|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNACandida albicans SC5314EukaryaRF02543 + RF00002Structure of Candida albicans 80S ribosome in complex with cycloheximideElectron microscopy2.5633672022-05-25
237Q0F|1|1+ 7Q0F|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNACandida albicans SC5314EukaryaRF02543 + RF00002Structure of Candida albicans 80S ribosome in complex with phyllanthosideElectron microscopy2.6433672022-05-18
247PZY|1|1+ 7PZY|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNACandida albicans SC5314EukaryaRF02543 + RF00002Structure of the vacant Candida albicans 80S ribosomeElectron microscopy2.3233672022-05-18
257Q0R|1|1+ 7Q0R|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNACandida albicans SC5314EukaryaRF02543 + RF00002Structure of the Candida albicans 80S ribosome in complex with blasticidin sElectron microscopy2.6733672022-05-25
267Q0P|1|1+ 7Q0P|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNACandida albicans SC5314EukaryaRF02543 + RF00002Structure of the Candida albicans 80S ribosome in complex with anisomycinElectron microscopy2.7733672022-05-18

Release history

Release4.0
Date2025-08-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
18C3A|1|AS+ 8C3A|1|AUCrystal structure of ailanthone bound to the Candida albicans 80S ribosomeX-RAY DIFFRACTION33387
28CQW|1|AS+ 8CQW|1|AUCrystal structure of the Candida albicans 80S ribosome in complex with Hygromycin BX-RAY DIFFRACTION3.053384
38CRE|1|AS+ 8CRE|1|AUCrystal structure of the Candida albicans 80S ribosome in complex with geneticin G418X-RAY DIFFRACTION33387
48CQ7|1|AS+ 8CQ7|1|AUCrystal structure of phyllanthoside bound to the Candida albicans 80S ribosomeX-RAY DIFFRACTION3.23380
58OJ3|1|AS+ 8OJ3|1|AUCrystal structure of the Candida albicans 80S ribosome in complex with geneticin G418 (rotated state)X-RAY DIFFRACTION3.53259
68OI5|1|AS+ 8OI5|1|AUCrystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)X-RAY DIFFRACTION2.93221
78OEQ|1|AS+ 8OEQ|1|AUCrystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)X-RAY DIFFRACTION3.33357
88OH6|1|AS+ 8OH6|1|AUCrystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (500umol)X-RAY DIFFRACTION3.353217
98Q5I|1|1+ 8Q5I|1|4Structure of Candida albicans 80S ribosome in complex with cephaelineELECTRON MICROSCOPY2.453231
107Q0P|1|1+ 7Q0P|1|4Structure of the Candida albicans 80S ribosome in complex with anisomycinELECTRON MICROSCOPY2.773367
117Q0R|1|1+ 7Q0R|1|4Structure of the Candida albicans 80S ribosome in complex with blasticidin sELECTRON MICROSCOPY2.673367
127PZY|1|1+ 7PZY|1|4Structure of the vacant Candida albicans 80S ribosomeELECTRON MICROSCOPY2.323367
137Q08|1|1+ 7Q08|1|4Structure of Candida albicans 80S ribosome in complex with cycloheximideELECTRON MICROSCOPY2.563367
147Q0F|1|1+ 7Q0F|1|4Structure of Candida albicans 80S ribosome in complex with phyllanthosideELECTRON MICROSCOPY2.643367
159G1Z|1|1+ 9G1Z|1|4Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)ELECTRON MICROSCOPY3.13303
168OGJ|1|1+ 8OGJ|1|4Structure of Candida albicans 80S ribosome in complex with mefloquineELECTRON MICROSCOPY3.13284
179G30|1|1+ 9G30|1|4The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) shows strong density for the A site tRNAELECTRON MICROSCOPY2.353222
189G6J|1|1+ 9G6J|1|4The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNAELECTRON MICROSCOPY2.153222
198OH6|1|1+ 8OH6|1|4Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (500umol)X-RAY DIFFRACTION3.353376
208OI5|1|1+ 8OI5|1|4Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)X-RAY DIFFRACTION2.93327
218OJ3|1|1+ 8OJ3|1|4Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418 (rotated state)X-RAY DIFFRACTION3.53374
228CRE|1|1+ 8CRE|1|4Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418X-RAY DIFFRACTION33373
238CQ7|1|1+ 8CQ7|1|4Crystal structure of phyllanthoside bound to the Candida albicans 80S ribosomeX-RAY DIFFRACTION3.23373
248CQW|1|1+ 8CQW|1|4Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin BX-RAY DIFFRACTION3.053365
258C3A|1|1+ 8C3A|1|4Crystal structure of ailanthone bound to the Candida albicans 80S ribosomeX-RAY DIFFRACTION33374
268OEQ|1|1+ 8OEQ|1|4Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)X-RAY DIFFRACTION3.33374

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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