Equivalence class NR_20.0_64199.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9OZ9|1|3 (rep) | 5S ribosomal RNA | 5S rRNA | Flavobacterium johnsoniae | Bacteria | RF00001 | Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. | Electron microscopy | 2.6 | 110 | 2026-04-15 |
| 2 | 9OZZ|1|3 | 5S ribosomal RNA | 5S rRNA | Flavobacterium johnsoniae | Bacteria | RF00001 | Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. | Electron microscopy | 2.5 | 110 | 2026-04-15 |
| 3 | 9OZN|1|3 | 5S ribosomal RNA | 5S rRNA | Flavobacterium johnsoniae | Bacteria | RF00001 | Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. | Electron microscopy | 2.7 | 110 | 2026-04-15 |
| 4 | 9P0E|1|3 | 5S ribosomal RNA | 5S rRNA | Flavobacterium johnsoniae | Bacteria | RF00001 | Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. | Electron microscopy | 2.8 | 110 | 2026-04-15 |
| 5 | 7JIL|1|3 | 5S ribosomal RNA | RNA (111-MER) | Flavobacterium johnsoniae | Bacteria | RF00001 | 70S ribosome Flavobacterium johnsoniae | Electron microscopy | 2.8 | 110 | 2020-12-02 |
Release history
| Release | 4.35 |
|---|---|
| Date | 2026-04-15 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9P0E|1|3 | Flavobacterium johnsoniae ZAM64 mutant 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. | ELECTRON MICROSCOPY | 2.8 | 110 | |
| 2 | 9OZN|1|3 | Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1. | ELECTRON MICROSCOPY | 2.7 | 110 | |
| 3 | 9OZZ|1|3 | Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2. | ELECTRON MICROSCOPY | 2.5 | 110 | |
| 4 | 9OZ9|1|3 | Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA. | ELECTRON MICROSCOPY | 2.6 | 110 | |
| 5 | 7JIL|1|3 | 70S ribosome Flavobacterium johnsoniae | ELECTRON MICROSCOPY | 2.8 | 110 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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