RNA 3D Hub //

Equivalence class NR_20.0_64588.1 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
19M78|1|A+ 9M78|1|B+ 9M78|1|C (rep)UCC118 Rool RNALigilactobacillus salivarius UCC118Consensus map of UCC118 Rool RNA at 2.26-angstrom resolutionElectron microscopy2.2614942025-09-10
29M78|1|D+ 9M78|1|E+ 9M78|1|FUCC118 Rool RNALigilactobacillus salivarius UCC118Consensus map of UCC118 Rool RNA at 2.26-angstrom resolutionElectron microscopy2.2614942025-09-10
39M79|1|AUCC118 Rool RNA monomerLigilactobacillus salivarius UCC118Focused asymmetric unit of UCC118 Rool RNA at 1.96-angstrom resolutionElectron microscopy1.964982025-09-10
49LE6|1|BUCC118 Rool RNALigilactobacillus salivarius UCC118Composite map of UCC118 Rool RNAElectron microscopy2.584982025-09-10
59LE6|1|EUCC118 Rool RNALigilactobacillus salivarius UCC118Composite map of UCC118 Rool RNAElectron microscopy2.584982025-09-10
69LE6|1|DUCC118 Rool RNALigilactobacillus salivarius UCC118Composite map of UCC118 Rool RNAElectron microscopy2.584982025-09-10
79LE6|1|CUCC118 Rool RNALigilactobacillus salivarius UCC118Composite map of UCC118 Rool RNAElectron microscopy2.584982025-09-10
89LE6|1|AUCC118 Rool RNALigilactobacillus salivarius UCC118Composite map of UCC118 Rool RNAElectron microscopy2.584982025-09-10
99LE6|1|FUCC118 Rool RNALigilactobacillus salivarius UCC118Composite map of UCC118 Rool RNAElectron microscopy2.584982025-09-10
109LE3|1|BUCC118 Rool RNALigilactobacillus salivarius UCC118Consensus map of UCC118 Rool RNAElectron microscopy2.754982025-09-10
119LE3|1|EUCC118 Rool RNALigilactobacillus salivarius UCC118Consensus map of UCC118 Rool RNAElectron microscopy2.754982025-09-10
129LE3|1|DUCC118 Rool RNALigilactobacillus salivarius UCC118Consensus map of UCC118 Rool RNAElectron microscopy2.754982025-09-10
139LE3|1|CUCC118 Rool RNALigilactobacillus salivarius UCC118Consensus map of UCC118 Rool RNAElectron microscopy2.754982025-09-10
149LE3|1|AUCC118 Rool RNALigilactobacillus salivarius UCC118Consensus map of UCC118 Rool RNAElectron microscopy2.754982025-09-10
159LE3|1|FUCC118 Rool RNALigilactobacillus salivarius UCC118Consensus map of UCC118 Rool RNAElectron microscopy2.754982025-09-10
169LE5|1|AUCC118 Rool RNALigilactobacillus salivarius UCC118Focused asymmetric unit of UCC118 Rool RNAElectron microscopy2.584982025-09-10
179J6Y|1|FRNA (550-MER)Ligilactobacillus salivarius DSM 20555 = ATCC 11741Lactobacillus salivarius ROOL RNA hexamerElectron microscopy3.254962025-03-19
189J6Y|1|CRNA (550-MER)Ligilactobacillus salivarius DSM 20555 = ATCC 11741Lactobacillus salivarius ROOL RNA hexamerElectron microscopy3.254962025-03-19
199J6Y|1|ARNA (550-MER)Ligilactobacillus salivarius DSM 20555 = ATCC 11741Lactobacillus salivarius ROOL RNA hexamerElectron microscopy3.254962025-03-19
209J6Y|1|BRNA (550-MER)Ligilactobacillus salivarius DSM 20555 = ATCC 11741Lactobacillus salivarius ROOL RNA hexamerElectron microscopy3.254962025-03-19
219J6Y|1|DRNA (550-MER)Ligilactobacillus salivarius DSM 20555 = ATCC 11741Lactobacillus salivarius ROOL RNA hexamerElectron microscopy3.254962025-03-19
229J6Y|1|ERNA (550-MER)Ligilactobacillus salivarius DSM 20555 = ATCC 11741Lactobacillus salivarius ROOL RNA hexamerElectron microscopy3.254962025-03-19

Release history

Release4.4
Date2025-09-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
19M78|1|D+ 9M78|1|E+ 9M78|1|FConsensus map of UCC118 Rool RNA at 2.26-angstrom resolutionELECTRON MICROSCOPY2.261494
29M78|1|A+ 9M78|1|B+ 9M78|1|CConsensus map of UCC118 Rool RNA at 2.26-angstrom resolutionELECTRON MICROSCOPY2.261494
39M79|1|AFocused asymmetric unit of UCC118 Rool RNA at 1.96-angstrom resolutionELECTRON MICROSCOPY1.96498
49LE6|1|BComposite map of UCC118 Rool RNAELECTRON MICROSCOPY2.58498
59LE3|1|BConsensus map of UCC118 Rool RNAELECTRON MICROSCOPY2.75498
69LE6|1|EComposite map of UCC118 Rool RNAELECTRON MICROSCOPY2.58498
79LE3|1|EConsensus map of UCC118 Rool RNAELECTRON MICROSCOPY2.75498
89LE6|1|FComposite map of UCC118 Rool RNAELECTRON MICROSCOPY2.58498
99LE3|1|FConsensus map of UCC118 Rool RNAELECTRON MICROSCOPY2.75498
109LE3|1|CConsensus map of UCC118 Rool RNAELECTRON MICROSCOPY2.75498
119LE6|1|CComposite map of UCC118 Rool RNAELECTRON MICROSCOPY2.58498
129LE3|1|DConsensus map of UCC118 Rool RNAELECTRON MICROSCOPY2.75498
139LE6|1|DComposite map of UCC118 Rool RNAELECTRON MICROSCOPY2.58498
149LE6|1|AComposite map of UCC118 Rool RNAELECTRON MICROSCOPY2.58498
159LE3|1|AConsensus map of UCC118 Rool RNAELECTRON MICROSCOPY2.75498
169LE5|1|AFocused asymmetric unit of UCC118 Rool RNAELECTRON MICROSCOPY2.58498
179J6Y|1|FLactobacillus salivarius ROOL RNA hexamerELECTRON MICROSCOPY3.25496
189J6Y|1|DLactobacillus salivarius ROOL RNA hexamerELECTRON MICROSCOPY3.25496
199J6Y|1|ELactobacillus salivarius ROOL RNA hexamerELECTRON MICROSCOPY3.25496
209J6Y|1|CLactobacillus salivarius ROOL RNA hexamerELECTRON MICROSCOPY3.25496
219J6Y|1|ALactobacillus salivarius ROOL RNA hexamerELECTRON MICROSCOPY3.25496
229J6Y|1|BLactobacillus salivarius ROOL RNA hexamerELECTRON MICROSCOPY3.25496

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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