NR_20.0_67193.9

Members (13)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	8OM4\|1\|r (rep)	Small subunit ribosomal RNA	15S mitochondrial rRNA	Saccharomyces cerevisiae	Mitochondria	RF00177	Small subunit of yeast mitochondrial ribosome.	Electron microscopy	2.32	1487	2024-01-10
2	8OM2\|1\|r	Small subunit ribosomal RNA	15S mitochondrial rRNA	Saccharomyces cerevisiae	Mitochondria	RF00177	Small subunit of yeast mitochondrial ribosome in complex with METTL17/Rsm22.	Electron microscopy	2.57	1486	2024-01-10
3	8OM3\|1\|r	Small subunit ribosomal RNA	15S mitochondrial rRNA	Saccharomyces cerevisiae	Mitochondria	RF00177	Small subunit of yeast mitochondrial ribosome in complex with IF3/Aim23.	Electron microscopy	2.87	1487	2024-01-10
4	8D8L\|1\|a	Small subunit ribosomal RNA	15S ribosomal RNA	Saccharomyces cerevisiae	Mitochondria	RF00177	Yeast mitochondrial small subunit assembly intermediate (State 3)	Electron microscopy	2.6	1506	2022-12-14
5	9HLZ\|1\|r	Small subunit ribosomal RNA	15S mitochondrial rRNA	Saccharomyces cerevisiae W303	Mitochondria	RF00177	Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome	Electron microscopy	3.2	1495	2025-12-17
6	9HM0\|1\|r	Small subunit ribosomal RNA	15S mitochondrial rRNA	Saccharomyces cerevisiae W303	Mitochondria	RF00177	Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome	Electron microscopy	3	1495	2025-12-17
7	8D8K\|1\|a	Small subunit ribosomal RNA	15S ribosomal RNA	Saccharomyces cerevisiae	Mitochondria	RF00177	Yeast mitochondrial small subunit assembly intermediate (State 2)	Electron microscopy	3.13	1538	2022-12-21
8	8D8J\|1\|a	Small subunit ribosomal RNA	15S ribosomal RNA	Saccharomyces cerevisiae	Mitochondria	RF00177	Yeast mitochondrial small subunit assembly intermediate (State 1)	Electron microscopy	3.8	1183	2022-12-21
9	8UXA\|1\|AL	Small subunit ribosomal RNA	Small ribosomal subunit rRNA	Saccharomyces cerevisiae	Mitochondria	RF00177	Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I	Electron microscopy	3.2	1501	2025-11-19
10	8UX4\|1\|AL	Small subunit ribosomal RNA	Small ribosomal subunit rRNA	Saccharomyces cerevisiae	Mitochondria	RF00177	Mitochondrial ribosome of saccharomyces cerevisiae class II from YEP with Dextrose culture	Electron microscopy	3.3	1498	2026-01-21
11	5MRE\|1\|aa	Small subunit ribosomal RNA	15S ribosomal RNA	Saccharomyces cerevisiae	Mitochondria	RF00177	Structure of the yeast mitochondrial ribosome - Class B	Electron microscopy	3.75	1501	2017-02-15
12	5MRF\|1\|aa	Small subunit ribosomal RNA	15S ribosomal RNA	Saccharomyces cerevisiae	Mitochondria	RF00177	Structure of the yeast mitochondrial ribosome - Class C	Electron microscopy	4.97	1501	2017-02-15
13	5MRC\|1\|aa	Small subunit ribosomal RNA	15S ribosomal RNA	Saccharomyces cerevisiae	Mitochondria	RF00177	Structure of the yeast mitochondrial ribosome - Class A	Electron microscopy	3.25	1501	2017-02-15

Release history

Release	4.23
Date	2026-01-21

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	View	PDB	Title	Method	Resolution	#NTs
1		8UX4\|1\|AL	Mitochondrial ribosome of saccharomyces cerevisiae class II from YEP with Dextrose culture	ELECTRON MICROSCOPY	3.3	1498
2		8UXA\|1\|AL	Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I	ELECTRON MICROSCOPY	3.2	1501
3		5MRE\|1\|aa	Structure of the yeast mitochondrial ribosome - Class B	ELECTRON MICROSCOPY	3.75	1501
4		9HM0\|1\|r	Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome	ELECTRON MICROSCOPY	3	1495
5		5MRC\|1\|aa	Structure of the yeast mitochondrial ribosome - Class A	ELECTRON MICROSCOPY	3.25	1501
6		5MRF\|1\|aa	Structure of the yeast mitochondrial ribosome - Class C	ELECTRON MICROSCOPY	4.97	1501
7		9HLZ\|1\|r	Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome	ELECTRON MICROSCOPY	3.2	1495
8		8OM3\|1\|r	Small subunit of yeast mitochondrial ribosome in complex with IF3/Aim23.	ELECTRON MICROSCOPY	2.87	1487
9		8OM4\|1\|r	Small subunit of yeast mitochondrial ribosome.	ELECTRON MICROSCOPY	2.32	1487
10		8OM2\|1\|r	Small subunit of yeast mitochondrial ribosome in complex with METTL17/Rsm22.	ELECTRON MICROSCOPY	2.57	1486
11		8D8L\|1\|a	Yeast mitochondrial small subunit assembly intermediate (State 3)	ELECTRON MICROSCOPY	2.6	1506
12		8D8K\|1\|a	Yeast mitochondrial small subunit assembly intermediate (State 2)	ELECTRON MICROSCOPY	3.13	1538
13		8D8J\|1\|a	Yeast mitochondrial small subunit assembly intermediate (State 1)	ELECTRON MICROSCOPY	3.8	1183

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

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