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Equivalence class NR_20.0_69813.4 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
15IBB|1|1K (rep)Transfer RNAmRNA, tRNAValEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.96722016-05-25
26CAE|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6742018-04-18
36ND6|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.85742019-02-20
45IBB|1|3LTransfer RNAtRNAValEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.96712016-05-25
56CAE|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6732018-04-18
66CAE|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6732018-04-18
76ND6|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.85732019-02-20
86CAE|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.6732018-04-18
95IBB|1|3KTransfer RNAtRNAValEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.96702016-05-25
106ND6|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.85732019-02-20
116ND6|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.85732019-02-20
124V7A|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)Electron microscopy9762014-07-09
134V6Y|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)Electron microscopy12762014-07-09
144V75|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)Electron microscopy12762014-07-09
154V6Z|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)Electron microscopy12762014-07-09
164V72|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)Electron microscopy13762014-07-09
174V73|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)Electron microscopy15762014-07-09
184V79|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)Electron microscopy15762014-07-09
194V70|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)Electron microscopy17762014-07-09
204V76|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)Electron microscopy17762014-07-09
214V77|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)Electron microscopy17762014-07-09
224V74|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF0000570S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)Electron microscopy17762014-07-09
234V78|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)Electron microscopy20762014-07-09
244V71|1|A1Transfer RNA5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3', fMet-Val-tRNA-ValEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)Electron microscopy20762014-07-09

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
14V7A|1|A1E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)ELECTRON MICROSCOPY976
24V76|1|A1E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY1776
34V75|1|A1E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY1276
46ND6|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8573
56CAE|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.673
66ND6|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8574
76CAE|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.674
85IBB|1|3KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9670
95IBB|1|3LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9671
104V78|1|A1E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY2076
114V6Z|1|A1E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY1276
126ND6|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8573
136CAE|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.673
146CAE|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.673
156ND6|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8573
164V6Y|1|A1E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY1276
174V79|1|A1E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY1576
185IBB|1|1KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9672
194V71|1|A1E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY2076
204V70|1|A1E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY1776
214V74|1|A170S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY1776
224V73|1|A1E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY1576
234V72|1|A1E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY1376
244V77|1|A1E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY1776

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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