#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18A57|1|A (rep)Large subunit ribosomal RNA23S ribosomal RNAListeria monocytogenes EGD-eBacteriaRF02541Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.Electron microscopy2.32022-11-02
28A5I|1|ALarge subunit ribosomal RNA23S ribosomal RNAListeria monocytogenes EGD-eBacteriaRF02541Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.Electron microscopy2.32022-11-02
38UUA|1|ALarge subunit ribosomal RNA23S Ribosomal RNAListeria innocuaBacteriaRF02541Cryo-EM structure of the Listeria innocua 50S ribosomal subunit in complex with HflXr (structure III)Electron microscopy2.72024-02-28
47NHN|1|ALarge subunit ribosomal RNA23S rRNAListeria monocytogenes EGD-eBacteriaRF02541VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenesElectron microscopy2.92021-05-05
58UU4|1|ALarge subunit ribosomal RNA23S Ribosomal RNAListeria innocuaBacteriaRF02541Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)Electron microscopy32024-02-28
68UU5|1|ALarge subunit ribosomal RNA23S Ribosomal RNAListeria innocuaBacteriaRF02541Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)Electron microscopy32024-02-28
78UU8|1|ALarge subunit ribosomal RNA23S Ribosomal RNAListeria innocuaBacteriaRF02541Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)Electron microscopy3.12024-02-28
88UU9|1|ALarge subunit ribosomal RNA23S Ribosomal RNAListeria innocuaBacteriaRF02541Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)Electron microscopy3.12024-02-28
98A63|1|ALarge subunit ribosomal RNA23S ribosomal RNAListeria monocytogenes EGD-eBacteriaRF02541Cryo-EM structure of Listeria monocytogenes 50S ribosomal subunit.Electron microscopy3.12022-11-02
108UU7|1|ALarge subunit ribosomal RNA23S Ribosomal RNAListeria innocuaBacteriaRF02541Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)Electron microscopy3.22024-02-28
118UU6|1|ALarge subunit ribosomal RNA23S Ribosomal RNAListeria innocuaBacteriaRF02541Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)Electron microscopy3.32024-02-28

Release history

Release3.3243.3253.3263.3273.3283.3293.3303.3313.332
Date2024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-24

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18A57|1|ACryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.ELECTRON MICROSCOPY2.32908
27NHN|1|AVgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenesELECTRON MICROSCOPY2.92908
38A5I|1|ACryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.ELECTRON MICROSCOPY2.32908
48A63|1|ACryo-EM structure of Listeria monocytogenes 50S ribosomal subunit.ELECTRON MICROSCOPY3.12908
58UU6|1|ACryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)ELECTRON MICROSCOPY3.32904
68UU9|1|ACryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)ELECTRON MICROSCOPY3.12899
78UU8|1|ACryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)ELECTRON MICROSCOPY3.12901
88UU5|1|ACryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)ELECTRON MICROSCOPY32902
98UU4|1|ACryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)ELECTRON MICROSCOPY32903
108UU7|1|ACryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)ELECTRON MICROSCOPY3.22909
118UUA|1|ACryo-EM structure of the Listeria innocua 50S ribosomal subunit in complex with HflXr (structure III)ELECTRON MICROSCOPY2.72894

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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