Equivalence class NR_20.0_83717.7 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 4YBB|1|DA (rep) | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
2 | 4V54|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-ray diffraction | 3.3 | 2014-07-09 |
3 | 4V54|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-ray diffraction | 3.3 | 2014-07-09 |
4 | 4WWW|1|RA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to CEM-101 | X-ray diffraction | 3.1 | 2014-12-24 |
5 | 4V7T|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-ray diffraction | 3.19 | 2014-07-09 |
6 | 4V6C|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.19 | 2014-07-09 |
7 | 4V52|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-ray diffraction | 3.21 | 2014-07-09 |
8 | 4V7S|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to telithromycin. | X-ray diffraction | 3.25 | 2014-07-09 |
9 | 4V52|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-ray diffraction | 3.21 | 2014-07-09 |
10 | 2J28|1|B | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | MODEL OF E. COLI SRP BOUND TO 70S RNCS | Electron microscopy | 9.5 | 2006-11-08 |
11 | 4V4Q|1|DB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
12 | 4V7U|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to erythromycin. | X-ray diffraction | 3.1 | 2014-07-09 |
13 | 4V4Q|1|BB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
14 | 4V50|1|DB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-ray diffraction | 3.22 | 2014-07-09 |
15 | 4V53|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-ray diffraction | 3.54 | 2014-07-09 |
16 | 3J5L|1|A | Large subunit ribosomal RNA | 23S ribsomal RNA, 5'-R(*CP*(MA6))-3', 5'-R(*CP*CP*A)-3' | Escherichia coli | Bacteria | RF02541 | Structure of the E. coli 50S subunit with ErmBL nascent chain | Electron microscopy | 6.6 | 2014-03-26 |
17 | 4V9P|1|EA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
18 | 4V50|1|BB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-ray diffraction | 3.22 | 2014-07-09 |
19 | 4V85|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome. | X-ray diffraction | 3.2 | 2014-07-09 |
20 | 4V53|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-ray diffraction | 3.54 | 2014-07-09 |
21 | 4V4H|1|DB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
22 | 4V9O|1|EA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
23 | 4V4H|1|BB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
24 | 4V55|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-ray diffraction | 4 | 2014-07-09 |
25 | 4V57|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-ray diffraction | 3.5 | 2014-07-09 |
26 | 4V7V|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to clindamycin. | X-ray diffraction | 3.29 | 2014-07-09 |
27 | 4V64|1|BB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-ray diffraction | 3.5 | 2014-07-09 |
28 | 4V57|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-ray diffraction | 3.5 | 2014-07-09 |
29 | 4V64|1|DB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-ray diffraction | 3.5 | 2014-07-09 |
30 | 4V5Y|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-ray diffraction | 4.45 | 2014-07-09 |
31 | 4V5Y|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-ray diffraction | 4.45 | 2014-07-09 |
32 | 4V55|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-ray diffraction | 4 | 2014-07-09 |
33 | 4V89|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin) | X-ray diffraction | 3.7 | 2014-07-09 |
34 | 4V6D|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.81 | 2014-07-09 |
35 | 4V9D|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-ray diffraction | 3 | 2014-07-09 |
36 | 4U27|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-ray diffraction | 2.8 | 2014-07-30 |
37 | 4U25|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-ray diffraction | 2.9 | 2014-07-30 |
38 | 4U24|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
39 | 4V6E|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.71 | 2014-07-09 |
40 | 4V9P|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
41 | 4V9P|1|AA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
42 | 4V9O|1|AA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
43 | 4WF1|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to negamycin. | X-ray diffraction | 3.09 | 2014-11-05 |
44 | 4U1U|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to quinupristin. | X-ray diffraction | 2.95 | 2014-07-30 |
45 | 3J7Z|1|A | Large subunit ribosomal RNA | 23S rRNA, P-tRNA CCA-end | Escherichia coli | Bacteria | RF02541 | Structure of the E. coli 50S subunit with ErmCL nascent chain | Electron microscopy | 3.9 | 2014-10-22 |
46 | 4V9O|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
47 | 4V56|1|DB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-ray diffraction | 3.93 | 2014-07-09 |
48 | 4UY8|1|A | Large subunit ribosomal RNA | RRNA-23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome | Electron microscopy | 3.8 | 2014-10-29 |
49 | 4U1V|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to linopristin. | X-ray diffraction | 3 | 2014-07-30 |
50 | 4V56|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-ray diffraction | 3.93 | 2014-07-09 |
51 | 4V6T|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading | Electron microscopy | 8.3 | 2014-07-09 |
52 | 4V7B|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Visualization of two tRNAs trapped in transit during EF-G-mediated translocation | Electron microscopy | 6.8 | 2014-07-09 |
53 | 4V9P|1|GA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
54 | 4U20|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
55 | 4U26|1|BA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-ray diffraction | 2.8 | 2014-07-30 |
56 | 4YBB|1|CA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
57 | 3J9Y|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome | Electron microscopy | 3.9 | 2015-04-15 |
58 | 5AFI|1|A | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | Electron microscopy | 2.9 | 2015-03-11 |
59 | 4V9D|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-ray diffraction | 3 | 2014-07-09 |
60 | 5AKA|1|B | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | EM structure of ribosome-SRP-FtsY complex in closed state | Electron microscopy | 5.7 | 2015-03-25 |
61 | 4U1U|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to quinupristin. | X-ray diffraction | 2.95 | 2014-07-30 |
62 | 4V6D|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.81 | 2014-07-09 |
63 | 4U20|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
64 | 4V6C|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.19 | 2014-07-09 |
65 | 4V9C|1|DA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Allosteric control of the ribosome by small-molecule antibiotics | X-ray diffraction | 3.3 | 2014-07-09 |
66 | 4V5H|1|BB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. | Electron microscopy | 5.8 | 2014-07-09 |
67 | 4U1V|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to linopristin. | X-ray diffraction | 3 | 2014-07-30 |
68 | 4V6V|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Tetracycline resistance protein Tet(O) bound to the ribosome | Electron microscopy | 9.8 | 2014-07-09 |
69 | 4V69|1|BB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Ternary complex-bound E.coli 70S ribosome. | Electron microscopy | 6.7 | 2014-07-09 |
70 | 4U25|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-ray diffraction | 2.9 | 2014-07-30 |
71 | 4V6E|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.71 | 2014-07-09 |
72 | 4V9O|1|GA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
73 | 4V6M|1|B8 | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Structure of the ribosome-SecYE complex in the membrane environment | Electron microscopy | 7.1 | 2014-07-09 |
74 | 4U27|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-ray diffraction | 2.8 | 2014-07-30 |
75 | 4V7S|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to telithromycin. | X-ray diffraction | 3.25 | 2014-07-09 |
76 | 4V7T|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-ray diffraction | 3.19 | 2014-07-09 |
77 | 4V75|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1) | Electron microscopy | 12 | 2014-07-09 |
78 | 4V7V|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to clindamycin. | X-ray diffraction | 3.29 | 2014-07-09 |
79 | 4V6Y|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a) | Electron microscopy | 12 | 2014-07-09 |
80 | 4WF1|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to negamycin. | X-ray diffraction | 3.09 | 2014-11-05 |
81 | 3J9Z|1|LA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | Electron microscopy | 3.6 | 2015-07-01 |
82 | 4V7A|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4) | Electron microscopy | 9 | 2014-07-09 |
83 | 4V6Z|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b) | Electron microscopy | 12 | 2014-07-09 |
84 | 4V72|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4) | Electron microscopy | 13 | 2014-07-09 |
85 | 4V76|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a) | Electron microscopy | 17 | 2014-07-09 |
86 | 4CSU|1|B | Large subunit ribosomal RNA | 23S RRNA | Escherichia coli | Bacteria | RF02541 | Cryo-EM structures of the 50S ribosome subunit bound with ObgE | Electron microscopy | 5.5 | 2014-06-04 |
87 | 4V73|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a) | Electron microscopy | 15 | 2014-07-09 |
88 | 4WWW|1|YA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to CEM-101 | X-ray diffraction | 3.1 | 2014-12-24 |
89 | 4U24|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
90 | 4V70|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3) | Electron microscopy | 17 | 2014-07-09 |
91 | 4V7I|1|A8 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Ribosome-SecY complex. | Electron microscopy | 9.6 | 2014-07-09 |
92 | 4U26|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-ray diffraction | 2.8 | 2014-07-30 |
93 | 4V9C|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Allosteric control of the ribosome by small-molecule antibiotics | X-ray diffraction | 3.3 | 2014-07-09 |
94 | 4V74|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b) | Electron microscopy | 17 | 2014-07-09 |
95 | 4V77|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b) | Electron microscopy | 17 | 2014-07-09 |
96 | 4V78|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a) | Electron microscopy | 20 | 2014-07-09 |
97 | 4V6K|1|AB | Large subunit ribosomal RNA | ribosomal RNA 23S | Escherichia coli | Bacteria | RF02541 | Structural insights into cognate vs. near-cognate discrimination during decoding. | Electron microscopy | 8.25 | 2014-07-09 |
98 | 4V71|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2) | Electron microscopy | 20 | 2014-07-09 |
99 | 4V79|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b) | Electron microscopy | 15 | 2014-07-09 |
100 | 3BBX|1|B | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex | Electron microscopy | 10 | 2008-10-21 |
101 | 4V7U|1|DA | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Crystal structure of the E. coli ribosome bound to erythromycin. | X-ray diffraction | 3.1 | 2014-07-09 |
102 | 4V6L|1|BB | Large subunit ribosomal RNA | 50S ribosomal RNA 23S | Escherichia coli | Bacteria | RF02541 | Structural insights into cognate vs. near-cognate discrimination during decoding. | Electron microscopy | 13.2 | 2014-07-09 |
103 | 3JA1|1|LA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | Electron microscopy | 3.6 | 2015-07-01 |
104 | 4V6N|1|AB | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes) | Electron microscopy | 12.1 | 2014-07-09 |
105 | 4V7D|1|AA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure) | Electron microscopy | 7.6 | 2014-07-09 |
106 | 4V6O|1|BB | Large subunit ribosomal RNA | 23S ribomosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes) | Electron microscopy | 14.7 | 2014-07-09 |
107 | 3J8G|1|B | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit | Electron microscopy | 5 | 2014-11-26 |
108 | 4V6R|1|BB | Large subunit ribosomal RNA | 23S ribomosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes) | Electron microscopy | 11.5 | 2014-07-09 |
109 | 4V6Q|1|BB | Large subunit ribosomal RNA | 23S ribomosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes) | Electron microscopy | 11.5 | 2014-07-09 |
110 | 4V6S|1|AB | Large subunit ribosomal RNA | 23S ribomosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes) | Electron microscopy | 13.1 | 2014-07-09 |
111 | 4V6P|1|BB | Large subunit ribosomal RNA | 23S ribomosomal RNA | Escherichia coli | Bacteria | RF02541 | Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes) | Electron microscopy | 13.5 | 2014-07-09 |
112 | 4V7C|1|BA | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure) | Electron microscopy | 7.6 | 2014-07-09 |
113 | 4V5B|1|AB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Structure of PDF binding helix in complex with the ribosome | X-ray diffraction | 3.74 | 2014-07-09 |
114 | 4V5B|1|CB | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | Structure of PDF binding helix in complex with the ribosome | X-ray diffraction | 3.74 | 2014-07-09 |
115 | 4V4V|1|B0 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056 | Electron microscopy | 15 | 2014-07-09 |
116 | 4V4W|1|B0 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143 | Electron microscopy | 15 | 2014-07-09 |
117 | 4V66|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E. coli ribosome and the tRNAs in Post-accommodation state | Electron microscopy | 9 | 2014-07-09 |
118 | 4V65|1|BB | Large subunit ribosomal RNA | 23S rRNA | Escherichia coli | Bacteria | RF02541 | Structure of the E. coli ribosome in the Pre-accommodation state | Electron microscopy | 9 | 2014-07-09 |
119 | 3DG0|1|B | Large subunit ribosomal RNA | 23S Ribosomal RNA from E. coli | Escherichia coli | Bacteria | RF02541 | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complex | Electron microscopy | 10.8 | 2009-02-03 |
120 | 3DG4|1|B | Large subunit ribosomal RNA | 23S RibosomaL RNA from E. coli | Escherichia coli | Bacteria | RF02541 | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complex | Electron microscopy | 12.8 | 2009-02-03 |
121 | 2RDO|1|B | Large subunit ribosomal RNA | 23S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF02541 | 50S subunit with EF-G(GDPNP) and RRF bound | Electron microscopy | 9.1 | 2008-03-04 |
122 | 3DG2|1|B | Large subunit ribosomal RNA | 23S Ribosomal RNA from E. coli | Escherichia coli | Bacteria | RF02541 | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complex | Electron microscopy | 10 | 2009-02-03 |
123 | 3DG5|1|B | Large subunit ribosomal RNA | 23S Ribosomal RNA from E. coli | Escherichia coli | Bacteria | RF02541 | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complex | Electron microscopy | 15.5 | 2009-02-03 |
124 | 4V47|1|A0 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome | Electron microscopy | 12.3 | 2014-07-09 |
125 | 4V48|1|A0 | Large subunit ribosomal RNA | 23S ribosomal RNA | Escherichia coli | Bacteria | RF02541 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome | Electron microscopy | 11.5 | 2014-07-09 |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
#S | View | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|---|
1 | 3J8G|1|B | Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit | ELECTRON MICROSCOPY | 5 | 2874 | |
2 | 3BBX|1|B | The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex | ELECTRON MICROSCOPY | 10 | 2902 | |
3 | 4V74|1|BA | 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b) | ELECTRON MICROSCOPY | 17 | 2903 | |
4 | 4V73|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a) | ELECTRON MICROSCOPY | 15 | 2903 | |
5 | 4V72|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4) | ELECTRON MICROSCOPY | 13 | 2903 | |
6 | 4V70|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3) | ELECTRON MICROSCOPY | 17 | 2903 | |
7 | 4V75|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1) | ELECTRON MICROSCOPY | 12 | 2903 | |
8 | 4V7D|1|AA | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure) | ELECTRON MICROSCOPY | 7.6 | 2897 | |
9 | 4V7C|1|BA | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure) | ELECTRON MICROSCOPY | 7.6 | 2897 | |
10 | 4V9C|1|DA | Allosteric control of the ribosome by small-molecule antibiotics | X-RAY DIFFRACTION | 3.3 | 2897 | |
11 | 4V9D|1|CA | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 2897 | |
12 | 4U1U|1|BA | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 2897 | |
13 | 4U20|1|BA | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 2897 | |
14 | 4U1V|1|BA | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 2897 | |
15 | 4WF1|1|BA | Crystal structure of the E. coli ribosome bound to negamycin. | X-RAY DIFFRACTION | 3.09 | 2897 | |
16 | 4U27|1|BA | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 2897 | |
17 | 4U25|1|BA | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 2897 | |
18 | 4U26|1|BA | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 2897 | |
19 | 4U24|1|BA | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 2897 | |
20 | 4V6T|1|BA | Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading | ELECTRON MICROSCOPY | 8.3 | 2903 | |
21 | 4V7B|1|BA | Visualization of two tRNAs trapped in transit during EF-G-mediated translocation | ELECTRON MICROSCOPY | 6.8 | 2854 | |
22 | 3JA1|1|LA | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | ELECTRON MICROSCOPY | 3.6 | 2904 | |
23 | 4V6Q|1|BB | Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes) | ELECTRON MICROSCOPY | 11.5 | 2880 | |
24 | 4V6R|1|BB | Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes) | ELECTRON MICROSCOPY | 11.5 | 2880 | |
25 | 4V6P|1|BB | Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes) | ELECTRON MICROSCOPY | 13.5 | 2880 | |
26 | 4V6O|1|BB | Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes) | ELECTRON MICROSCOPY | 14.7 | 2880 | |
27 | 4V6S|1|AB | Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes) | ELECTRON MICROSCOPY | 13.1 | 2880 | |
28 | 4V6N|1|AB | Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes) | ELECTRON MICROSCOPY | 12.1 | 2880 | |
29 | 4V6V|1|BA | Tetracycline resistance protein Tet(O) bound to the ribosome | ELECTRON MICROSCOPY | 9.8 | 2881 | |
30 | 4V69|1|BB | Ternary complex-bound E.coli 70S ribosome. | ELECTRON MICROSCOPY | 6.7 | 2903 | |
31 | 3J9Z|1|LA | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | ELECTRON MICROSCOPY | 3.6 | 2904 | |
32 | 3J9Y|1|A | Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome | ELECTRON MICROSCOPY | 3.9 | 2876 | |
33 | 5AFI|1|A | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | ELECTRON MICROSCOPY | 2.9 | 2876 | |
34 | 4V54|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 3.3 | 2841 | |
35 | 4V56|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-RAY DIFFRACTION | 3.93 | 2841 | |
36 | 4V57|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-RAY DIFFRACTION | 3.5 | 2841 | |
37 | 4V5Y|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4.45 | 2841 | |
38 | 4V52|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-RAY DIFFRACTION | 3.21 | 2841 | |
39 | 4V53|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-RAY DIFFRACTION | 3.54 | 2841 | |
40 | 4V55|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4 | 2841 | |
41 | 4V64|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-RAY DIFFRACTION | 3.5 | 2841 | |
42 | 4V4H|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-RAY DIFFRACTION | 3.46 | 2841 | |
43 | 4V4Q|1|BB | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-RAY DIFFRACTION | 3.46 | 2841 | |
44 | 4V5B|1|AB | Structure of PDF binding helix in complex with the ribosome | X-RAY DIFFRACTION | 3.74 | 2841 | |
45 | 4V50|1|BB | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-RAY DIFFRACTION | 3.22 | 2841 | |
46 | 4V6D|1|DA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.81 | 2841 | |
47 | 4V6E|1|DA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.71 | 2841 | |
48 | 4V6C|1|DA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.19 | 2841 | |
49 | 4V7T|1|DA | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-RAY DIFFRACTION | 3.19 | 2841 | |
50 | 4V7V|1|DA | Crystal structure of the E. coli ribosome bound to clindamycin. | X-RAY DIFFRACTION | 3.29 | 2841 | |
51 | 4V7S|1|DA | Crystal structure of the E. coli ribosome bound to telithromycin. | X-RAY DIFFRACTION | 3.25 | 2841 | |
52 | 4WWW|1|YA | Crystal structure of the E. coli ribosome bound to CEM-101 | X-RAY DIFFRACTION | 3.1 | 2841 | |
53 | 4V7U|1|DA | Crystal structure of the E. coli ribosome bound to erythromycin. | X-RAY DIFFRACTION | 3.1 | 2841 | |
54 | 4YBB|1|CA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2876 | |
55 | 4U24|1|DA | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 2897 | |
56 | 4U26|1|DA | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 2897 | |
57 | 4U27|1|DA | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 2897 | |
58 | 4U25|1|DA | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 2897 | |
59 | 4U1V|1|DA | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 2897 | |
60 | 4U20|1|DA | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 2897 | |
61 | 4U1U|1|DA | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 2897 | |
62 | 4WF1|1|DA | Crystal structure of the E. coli ribosome bound to negamycin. | X-RAY DIFFRACTION | 3.09 | 2897 | |
63 | 4V9D|1|DA | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 2896 | |
64 | 4V9C|1|BA | Allosteric control of the ribosome by small-molecule antibiotics | X-RAY DIFFRACTION | 3.3 | 2897 | |
65 | 4V9P|1|AA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
66 | 3J7Z|1|A | Structure of the E. coli 50S subunit with ErmCL nascent chain | ELECTRON MICROSCOPY | 3.9 | 2854 | |
67 | 4UY8|1|A | Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome | ELECTRON MICROSCOPY | 3.8 | 2854 | |
68 | 4V9O|1|AA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
69 | 4V9O|1|CA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
70 | 4V9P|1|CA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
71 | 4V9P|1|GA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
72 | 4V9O|1|GA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
73 | 4V9O|1|EA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
74 | 4V9P|1|EA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 | |
75 | 4V85|1|BA | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome. | X-RAY DIFFRACTION | 3.2 | 2853 | |
76 | 4V89|1|BA | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin) | X-RAY DIFFRACTION | 3.7 | 2853 | |
77 | 3J5L|1|A | Structure of the E. coli 50S subunit with ErmBL nascent chain | ELECTRON MICROSCOPY | 6.6 | 2853 | |
78 | 4V7U|1|BA | Crystal structure of the E. coli ribosome bound to erythromycin. | X-RAY DIFFRACTION | 3.1 | 2854 | |
79 | 4V7V|1|BA | Crystal structure of the E. coli ribosome bound to clindamycin. | X-RAY DIFFRACTION | 3.29 | 2854 | |
80 | 4V7T|1|BA | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-RAY DIFFRACTION | 3.19 | 2854 | |
81 | 4V6C|1|BA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.19 | 2854 | |
82 | 4V7S|1|BA | Crystal structure of the E. coli ribosome bound to telithromycin. | X-RAY DIFFRACTION | 3.25 | 2854 | |
83 | 4WWW|1|RA | Crystal structure of the E. coli ribosome bound to CEM-101 | X-RAY DIFFRACTION | 3.1 | 2854 | |
84 | 4V6D|1|BA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.81 | 2854 | |
85 | 4V6E|1|BA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.71 | 2854 | |
86 | 4YBB|1|DA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2883 | |
87 | 4V50|1|DB | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-RAY DIFFRACTION | 3.22 | 2841 | |
88 | 4V56|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-RAY DIFFRACTION | 3.93 | 2841 | |
89 | 4V57|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-RAY DIFFRACTION | 3.5 | 2841 | |
90 | 4V4Q|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-RAY DIFFRACTION | 3.46 | 2841 | |
91 | 2J28|1|B | MODEL OF E. COLI SRP BOUND TO 70S RNCS | ELECTRON MICROSCOPY | 9.5 | 2841 | |
92 | 4V4H|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-RAY DIFFRACTION | 3.46 | 2841 | |
93 | 4V54|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 3.3 | 2841 | |
94 | 4V53|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-RAY DIFFRACTION | 3.54 | 2841 | |
95 | 4V55|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4 | 2841 | |
96 | 4V5Y|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4.45 | 2841 | |
97 | 4V52|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-RAY DIFFRACTION | 3.21 | 2841 | |
98 | 4V64|1|DB | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-RAY DIFFRACTION | 3.5 | 2841 | |
99 | 4V5B|1|CB | Structure of PDF binding helix in complex with the ribosome | X-RAY DIFFRACTION | 3.74 | 2841 | |
100 | 4V5H|1|BB | E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. | ELECTRON MICROSCOPY | 5.8 | 2903 | |
101 | 4V6M|1|B8 | Structure of the ribosome-SecYE complex in the membrane environment | ELECTRON MICROSCOPY | 7.1 | 2904 | |
102 | 5AKA|1|B | EM structure of ribosome-SRP-FtsY complex in closed state | ELECTRON MICROSCOPY | 5.7 | 2841 | |
103 | 4V6L|1|BB | Structural insights into cognate vs. near-cognate discrimination during decoding. | ELECTRON MICROSCOPY | 13.2 | 2880 | |
104 | 4V6K|1|AB | Structural insights into cognate vs. near-cognate discrimination during decoding. | ELECTRON MICROSCOPY | 8.25 | 2880 | |
105 | 4V7I|1|A8 | Ribosome-SecY complex. | ELECTRON MICROSCOPY | 9.6 | 2903 | |
106 | 4CSU|1|B | Cryo-EM structures of the 50S ribosome subunit bound with ObgE | ELECTRON MICROSCOPY | 5.5 | 2903 | |
107 | 4V77|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b) | ELECTRON MICROSCOPY | 17 | 2903 | |
108 | 4V76|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a) | ELECTRON MICROSCOPY | 17 | 2903 | |
109 | 4V78|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a) | ELECTRON MICROSCOPY | 20 | 2903 | |
110 | 4V6Z|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b) | ELECTRON MICROSCOPY | 12 | 2903 | |
111 | 4V79|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b) | ELECTRON MICROSCOPY | 15 | 2903 | |
112 | 4V71|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2) | ELECTRON MICROSCOPY | 20 | 2903 | |
113 | 4V6Y|1|BA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a) | ELECTRON MICROSCOPY | 12 | 2903 | |
114 | 4V7A|1|BA | E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4) | ELECTRON MICROSCOPY | 9 | 2903 | |
115 | 4V66|1|BB | Structure of the E. coli ribosome and the tRNAs in Post-accommodation state | ELECTRON MICROSCOPY | 9 | 2903 | |
116 | 4V65|1|BB | Structure of the E. coli ribosome in the Pre-accommodation state | ELECTRON MICROSCOPY | 9 | 2903 | |
117 | 4V4V|1|B0 | Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056 | ELECTRON MICROSCOPY | 15 | 2740 | |
118 | 4V4W|1|B0 | Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143 | ELECTRON MICROSCOPY | 15 | 2740 | |
119 | 3DG5|1|B | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complex | ELECTRON MICROSCOPY | 15.5 | 2841 | |
120 | 2RDO|1|B | 50S subunit with EF-G(GDPNP) and RRF bound | ELECTRON MICROSCOPY | 9.1 | 2841 | |
121 | 3DG4|1|B | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complex | ELECTRON MICROSCOPY | 12.8 | 2841 | |
122 | 3DG2|1|B | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complex | ELECTRON MICROSCOPY | 10 | 2841 | |
123 | 3DG0|1|B | Coordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complex | ELECTRON MICROSCOPY | 10.8 | 2841 | |
124 | 4V47|1|A0 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome | ELECTRON MICROSCOPY | 12.3 | 2536 | |
125 | 4V48|1|A0 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome | ELECTRON MICROSCOPY | 11.5 | 2536 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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