NR_20.0_83891.28

Members (43)
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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	9T4R\|1\|b (rep)	5S ribosomal RNA	5S rRNA	Staphylococcus aureus	Bacteria	RF00001	Staphylococcus aureus 70S initiation complex with a natural mRNA	Electron microscopy	2.3	115	2026-02-25
2	9GHG\|1\|B	5S ribosomal RNA	5S rRNA	Staphylococcus aureus subsp. aureus NCTC 8325	Bacteria	RF00001	Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)	Electron microscopy	2.22	113	2025-03-26
3	9QEH\|1\|B	5S ribosomal RNA	5S rRNA	Staphylococcus aureus subsp. aureus USA300	Bacteria	RF00001	Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin	Electron microscopy	2.08	113	2025-06-04
4	9QEG\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus subsp. aureus USA300	Bacteria	RF00001	Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin	Electron microscopy	2.21	113	2025-06-04
5	7ASM\|1\|B	5S ribosomal RNA	5S rRNA	Staphylococcus aureus	Bacteria	RF00001	Staphylococcus aureus 50S after 30 minutes incubation at 37C	Electron microscopy	2.48	115	2021-11-17
6	9GHH\|1\|B	5S ribosomal RNA	5S rRNA	Staphylococcus aureus subsp. aureus NCTC 8325	Bacteria	RF00001	Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)	Electron microscopy	2.7	113	2025-03-26
7	5NGM\|1\|AB	5S ribosomal RNA	5S Ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	2.9S structure of the 70S ribosome composing the S. aureus 100S complex	Electron microscopy	2.9	115	2017-10-04
8	6S0X\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.	Electron microscopy	2.42	115	2019-08-21
9	6S0Z\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.	Electron microscopy	2.3	114	2019-08-21
10	9I88\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Structure of the wild-type Staphylococcus aureus 70S ribosome complexed with clincelin	Electron microscopy	2.98	113	2026-04-15
11	7ASP\|1\|3	5S ribosomal RNA	5S rRNA	Staphylococcus aureus	Bacteria	RF00001	Staphylococcus aureus 70S after 50 minutes incubation at 37C	Electron microscopy	2.86	114	2021-11-17
12	4WF9\|1\|Y	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin	X-ray diffraction	3.43	114	2015-10-21
13	9I89\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Structure of the A2058-dimethylated Staphylococcus aureus 70S ribosome complexed with clincelin	Electron microscopy	3.01	113	2026-04-15
14	7NHM\|1\|B	5S ribosomal RNA	5S rRNA	Staphylococcus aureus subsp. aureus NCTC 8325	Bacteria	RF00001	70S ribosome from Staphylococcus aureus	Electron microscopy	3.1	113	2021-05-05
15	4WFA\|1\|Y	5S ribosomal RNA	5S rRNA	Staphylococcus aureus	Bacteria	RF00001	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid	X-ray diffraction	3.39	114	2015-10-21
16	5HKV\|1\|Y	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycin	X-ray diffraction	3.66	114	2017-05-03
17	5HL7\|1\|Y	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulin	X-ray diffraction	3.55	114	2016-12-21
18	4WCE\|1\|Y	5S ribosomal RNA	5S rRNA	Staphylococcus aureus	Bacteria	RF00001	The crystal structure of the large ribosomal subunit of Staphylococcus aureus	X-ray diffraction	3.53	114	2015-10-21
19	4WFB\|1\|Y	5S ribosomal RNA	5S rRNA	Staphylococcus aureus	Bacteria	RF00001	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205	X-ray diffraction	3.43	114	2015-10-21
20	7NHL\|1\|B	5S ribosomal RNA	5S rRNA	Staphylococcus aureus subsp. aureus NCTC 8325	Bacteria	RF00001	VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus	Electron microscopy	3.1	113	2021-05-05
21	5T7V\|1\|C	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)	Electron microscopy	3.6	114	2017-05-31
22	7ASO\|1\|C	5S ribosomal RNA	5S	Staphylococcus aureus	Bacteria	RF00001	Staphylococcus aureus 70S after 30 minutes incubation at 37C	Electron microscopy	3.11	114	2021-11-17
23	5NRG\|1\|Y	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02	X-ray diffraction	3.44	114	2017-08-09
24	5ND8\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Hibernating ribosome from Staphylococcus aureus (Unrotated state)	Electron microscopy	3.7	114	2017-06-28
25	5TCU\|1\|C	5S ribosomal RNA	5S rRNA CHAIN	Staphylococcus aureus	Bacteria	RF00001	Methicillin sensitive Staphylococcus aureus 70S ribosome	Electron microscopy	3.9	114	2017-05-24
26	5ND9\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Hibernating ribosome from Staphylococcus aureus (Rotated state)	Electron microscopy	3.7	114	2017-06-28
27	7ASN\|1\|B	5S ribosomal RNA	5S	Staphylococcus aureus	Bacteria	RF00001	Staphylococcus aureus 50S after 30 minutes incubation a 37C	Electron microscopy	2.73	106	2021-11-17
28	5LI0\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	70S ribosome from Staphylococcus aureus	Electron microscopy	3.8	114	2016-12-28
29	6S12\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).	Electron microscopy	3.2	115	2019-08-21
30	6SJ6\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus	Electron microscopy	3.23	112	2020-04-08
31	6FXC\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus	Electron microscopy	6.76	115	2018-03-21
32	6FXC\|1\|AB	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus	Electron microscopy	6.76	115	2018-03-21
33	6S13\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).	Electron microscopy	3.58	115	2019-08-21
34	7P48\|1\|B	5S ribosomal RNA	5S rRNA	Staphylococcus aureus	Bacteria	RF00001	Staphylococcus aureus ribosome in complex with Sal(B)	Electron microscopy	2.9	113	2022-02-02
35	8P2G\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus subsp. aureus NCTC 8325	Bacteria	RF00001	Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state	Electron microscopy	2.02	113	2024-05-01
36	8P2F\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus subsp. aureus NCTC 8325	Bacteria	RF00001	Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state	Electron microscopy	2.44	113	2024-05-01
37	8Y37\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.	Electron microscopy	2.53	115	2024-07-24
38	8P2H\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus subsp. aureus NCTC 8325	Bacteria	RF00001	Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state	Electron microscopy	2.49	113	2024-05-01
39	8Y38\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with MCX-190.	Electron microscopy	2.58	115	2024-07-24
40	6HMA\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit	Electron microscopy	2.65	115	2018-11-14
41	8Y36\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.	Electron microscopy	2.65	115	2024-07-24
42	6YEF\|1\|B	5S ribosomal RNA	5S rRNA	Staphylococcus aureus subsp. aureus NCTC 8325	Bacteria	RF00001	70S initiation complex with assigned rRNA modifications from Staphylococcus aureus	Electron microscopy	3.2	115	2021-01-27
43	8Y39\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Staphylococcus aureus	Bacteria	RF00001	cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with MCX-190.	Electron microscopy	3.6	115	2024-07-24

Release history

Release	4.35
Date	2026-04-15

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This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	7ASN\|1\|B	Staphylococcus aureus 50S after 30 minutes incubation a 37C	ELECTRON MICROSCOPY	2.73	106
2	6SJ6\|1\|B	Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus	ELECTRON MICROSCOPY	3.23	112
3	6S13\|1\|B	Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).	ELECTRON MICROSCOPY	3.58	115
4	6S12\|1\|B	Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).	ELECTRON MICROSCOPY	3.2	115
5	8Y36\|1\|B	cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.	ELECTRON MICROSCOPY	2.65	115
6	6FXC\|1\|AB	The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus	ELECTRON MICROSCOPY	6.76	115
7	6FXC\|1\|BB	The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus	ELECTRON MICROSCOPY	6.76	115
8	5NGM\|1\|AB	2.9S structure of the 70S ribosome composing the S. aureus 100S complex	ELECTRON MICROSCOPY	2.9	115
9	6S0Z\|1\|B	Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.	ELECTRON MICROSCOPY	2.3	114
10	6S0X\|1\|B	Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.	ELECTRON MICROSCOPY	2.42	115
11	7P48\|1\|B	Staphylococcus aureus ribosome in complex with Sal(B)	ELECTRON MICROSCOPY	2.9	113
12	6HMA\|1\|B	Improved model derived from cryo-EM map of Staphylococcus aureus large ribosomal subunit	ELECTRON MICROSCOPY	2.65	115
13	7ASM\|1\|B	Staphylococcus aureus 50S after 30 minutes incubation at 37C	ELECTRON MICROSCOPY	2.48	115
14	7NHM\|1\|B	70S ribosome from Staphylococcus aureus	ELECTRON MICROSCOPY	3.1	113
15	9I89\|1\|B	Structure of the A2058-dimethylated Staphylococcus aureus 70S ribosome complexed with clincelin	ELECTRON MICROSCOPY	3.01	113
16	9I88\|1\|B	Structure of the wild-type Staphylococcus aureus 70S ribosome complexed with clincelin	ELECTRON MICROSCOPY	2.98	113
17	7NHL\|1\|B	VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus	ELECTRON MICROSCOPY	3.1	113
18	9T4R\|1\|b	Staphylococcus aureus 70S initiation complex with a natural mRNA	ELECTRON MICROSCOPY	2.3	115
19	6YEF\|1\|B	70S initiation complex with assigned rRNA modifications from Staphylococcus aureus	ELECTRON MICROSCOPY	3.2	115
20	8P2F\|1\|B	Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state	ELECTRON MICROSCOPY	2.44	113
21	8P2H\|1\|B	Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state	ELECTRON MICROSCOPY	2.49	113
22	8P2G\|1\|B	Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state	ELECTRON MICROSCOPY	2.02	113
23	9GHG\|1\|B	Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)	ELECTRON MICROSCOPY	2.22	113
24	9GHH\|1\|B	Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)	ELECTRON MICROSCOPY	2.7	113
25	9QEG\|1\|B	Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin	ELECTRON MICROSCOPY	2.21	113
26	9QEH\|1\|B	Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin	ELECTRON MICROSCOPY	2.08	113
27	8Y37\|1\|B	Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.	ELECTRON MICROSCOPY	2.53	115
28	8Y38\|1\|B	Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with MCX-190.	ELECTRON MICROSCOPY	2.58	115
29	8Y39\|1\|B	cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with MCX-190.	ELECTRON MICROSCOPY	3.6	115
30	5T7V\|1\|C	Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)	ELECTRON MICROSCOPY	3.6	114
31	7ASP\|1\|3	Staphylococcus aureus 70S after 50 minutes incubation at 37C	ELECTRON MICROSCOPY	2.86	114
32	5ND8\|1\|B	Hibernating ribosome from Staphylococcus aureus (Unrotated state)	ELECTRON MICROSCOPY	3.7	114
33	5ND9\|1\|B	Hibernating ribosome from Staphylococcus aureus (Rotated state)	ELECTRON MICROSCOPY	3.7	114
34	5LI0\|1\|B	70S ribosome from Staphylococcus aureus	ELECTRON MICROSCOPY	3.8	114
35	4WFB\|1\|Y	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205	X-RAY DIFFRACTION	3.43	114
36	4WF9\|1\|Y	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin	X-RAY DIFFRACTION	3.43	114
37	4WFA\|1\|Y	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid	X-RAY DIFFRACTION	3.39	114
38	4WCE\|1\|Y	The crystal structure of the large ribosomal subunit of Staphylococcus aureus	X-RAY DIFFRACTION	3.53	114
39	5HKV\|1\|Y	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycin	X-RAY DIFFRACTION	3.66	114
40	5NRG\|1\|Y	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02	X-RAY DIFFRACTION	3.44	114
41	5HL7\|1\|Y	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulin	X-RAY DIFFRACTION	3.55	114
42	5TCU\|1\|C	Methicillin sensitive Staphylococcus aureus 70S ribosome	ELECTRON MICROSCOPY	3.9	114
43	7ASO\|1\|C	Staphylococcus aureus 70S after 30 minutes incubation at 37C	ELECTRON MICROSCOPY	3.11	114

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_20.0_83891.28 Current

Release history

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