#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17QCA|1|L70 (rep)5S ribosomal RNARNA 5SSpraguea lophii 42_110EukaryaRF00001Spraguea lophii ribosomeElectron microscopy2.782022-11-30
28P5D|1|L705S ribosomal RNARNA 5SSpraguea lophii 42_110EukaryaRF00001Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averagingElectron microscopy9.552023-06-21
38BR3|1|L705S ribosomal RNARNA 5SSpraguea lophii 42_110EukaryaRF00001Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averagingElectron microscopy9.552023-04-12
47QJH|1|K705S ribosomal RNARNA 5SSpraguea lophii 42_110EukaryaRF00001Spraguea lophii ribosome dimerElectron microscopy102022-12-28
57QJH|1|L705S ribosomal RNARNA 5SSpraguea lophii 42_110EukaryaRF00001Spraguea lophii ribosome dimerElectron microscopy102022-12-28
68P60|1|L705S ribosomal RNARNA 5SSpraguea lophii 42_110EukaryaRF00001Spraguea lophii ribosome dimerElectron microscopy11.32023-06-21
78P60|1|K705S ribosomal RNARNA 5SSpraguea lophii 42_110EukaryaRF00001Spraguea lophii ribosome dimerElectron microscopy11.32023-06-21

Release history

Release3.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.298
Date2023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_85512.1NR_20.0_20401.23.288(4) 7QCA|1|L70, 7QJH|1|K70, 7QJH|1|L70, 8BR3|1|L70(3) 8P5D|1|L70, 8P60|1|K70, 8P60|1|L70(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_85512.1NR_20.0_25416.13.299(4) 7QCA|1|L70, 8P5D|1|L70, 8P60|1|K70, 8P60|1|L70(3) 7QJH|1|K70, 7QJH|1|L70, 8BR3|1|L70(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18BR3|1|L70Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averagingELECTRON MICROSCOPY9.55119
28P5D|1|L70Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averagingELECTRON MICROSCOPY9.55119
37QCA|1|L70Spraguea lophii ribosomeELECTRON MICROSCOPY2.78119
48P60|1|K70Spraguea lophii ribosome dimerELECTRON MICROSCOPY11.3119
57QJH|1|K70Spraguea lophii ribosome dimerELECTRON MICROSCOPY10119
68P60|1|L70Spraguea lophii ribosome dimerELECTRON MICROSCOPY11.3119
77QJH|1|L70Spraguea lophii ribosome dimerELECTRON MICROSCOPY10119

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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