Equivalence class NR_20.0_86966.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 9PJ7|1|A (rep) | Small subunit ribosomal RNA | 16S rRNA | Cutibacterium acnes | Bacteria | RF00177 | C. acnes 70S ribosome bound to Doxycycline | Electron microscopy | 2.4 | 1512 | 2026-05-13 |
| 2 | 9PJ9|1|A | Small subunit ribosomal RNA | 16S rRNA | Cutibacterium acnes | Bacteria | RF00177 | C. acnes 70S ribosome bound to Minocycline | Electron microscopy | 2.5 | 1505 | 2026-05-13 |
| 3 | 9PJ8|1|A | Small subunit ribosomal RNA | 16S rRNA | Cutibacterium acnes | Bacteria | RF00177 | C. acnes 70S ribosome bound to Sarecycline | Electron microscopy | 2.5 | 1505 | 2026-05-13 |
| 4 | 8CRX|1|A | Small subunit ribosomal RNA | RNA (1537-MER) | Cutibacterium acnes | Bacteria | RF00177 | Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound | Electron microscopy | 2.78 | 1505 | 2023-03-22 |
| 5 | 8CWO|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Cutibacterium acnes | Bacteria | RF00177 | Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, body domain only in the local refined map | Electron microscopy | 2.84 | 1034 | 2023-03-15 |
| 6 | 8CVO|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Cutibacterium acnes | Bacteria | RF00177 | Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, head domain only in the local refined map | Electron microscopy | 2.95 | 471 | 2023-03-15 |
Release history
| Release | 4.39 |
|---|---|
| Date | 2026-05-13 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 9PJ8|1|A | C. acnes 70S ribosome bound to Sarecycline | ELECTRON MICROSCOPY | 2.5 | 1505 | |
| 2 | 9PJ7|1|A | C. acnes 70S ribosome bound to Doxycycline | ELECTRON MICROSCOPY | 2.4 | 1512 | |
| 3 | 9PJ9|1|A | C. acnes 70S ribosome bound to Minocycline | ELECTRON MICROSCOPY | 2.5 | 1505 | |
| 4 | 8CWO|1|A | Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, body domain only in the local refined map | ELECTRON MICROSCOPY | 2.84 | 1034 | |
| 5 | 8CRX|1|A | Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound | ELECTRON MICROSCOPY | 2.78 | 1505 | |
| 6 | 8CVO|1|A | Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, head domain only in the local refined map | ELECTRON MICROSCOPY | 2.95 | 471 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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