NR_20.0_89181.2

Members (19)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	8FR8\|1\|B (rep)	5S ribosomal RNA	5S rRNA (118-MER)	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex	Electron microscopy	2.76	2023-05-17
2	8WHX\|1\|B	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.	Electron microscopy	2.8	2024-02-28
3	8WHY\|1\|B	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome and RafH.	Electron microscopy	2.7	2024-02-28
4	8WI8\|1\|B	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, bS1 and RafH.	Electron microscopy	2.7	2024-02-28
5	8V9L\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)	Electron microscopy	3	2024-02-07
6	7S0S\|1\|i	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis	Bacteria	RF00001	M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit	Electron microscopy	3.05	2022-03-30
7	8V9J\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4)	Electron microscopy	3.1	2024-02-07
8	8V9K\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)	Electron microscopy	3.1	2024-02-07
9	5XYM\|1\|B	5S ribosomal RNA	5S RNA	Mycolicibacterium smegmatis	Bacteria	RF00001	Large subunit of Mycobacterium smegmatis	Electron microscopy	3.08	2017-09-27
10	5O60\|1\|B	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis	Bacteria	RF00001	Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis	Electron microscopy	3.18	2017-07-12
11	8KAB\|1\|B	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Mycobacterium smegmatis 50S ribosomal subunit-HflX complex	Electron microscopy	3.3	2024-07-31
12	8WI7\|1\|B	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.	Electron microscopy	3.5	2024-02-28
13	7XAM\|1\|B	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth	Electron microscopy	3.5	2023-05-03
14	8WIB\|1\|B	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.	Electron microscopy	3.5	2024-02-28
15	6DZP\|1\|B	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis	Bacteria	RF00001	Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit	Electron microscopy	3.42	2018-10-03
16	6DZI\|1\|B	5S ribosomal RNA	5S RNA (118-MER)	Mycolicibacterium smegmatis	Bacteria	RF00001	Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex	Electron microscopy	3.46	2018-09-26
17	8WIC\|1\|B	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E- tRNA and RafH.	Electron microscopy	3.5	2024-02-28
18	8XZ3\|1\|B	5S ribosomal RNA	5S rRNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Mycobacterium smegmatis 50S ribosomal subunit with Erythromycin	Electron microscopy	3.6	2024-07-31
19	7Y41\|1\|B	5S ribosomal RNA	5S ribosomal RNA	Mycolicibacterium smegmatis MC2 155	Bacteria	RF00001	Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth	Electron microscopy	4.1	2023-05-03

Release history

Release	3.346	3.347	3.348	3.349	3.350	3.351	3.352	3.353	3.354	3.355	3.356	3.357	3.358	3.359	3.360	3.361	3.362
Date	2024-07-31	2024-08-07	2024-08-14	2024-08-21	2024-08-28	2024-09-04	2024-09-11	2024-09-18	2024-09-25	2024-10-02	2024-10-09	2024-10-16	2024-10-23	2024-10-30	2024-11-06	2024-11-13	2024-11-20

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	View	PDB	Title	Method	Resolution	Length
1		8FR8\|1\|B	Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex	ELECTRON MICROSCOPY	2.76	118
2		7S0S\|1\|i	M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit	ELECTRON MICROSCOPY	3.05	118
3		8WI8\|1\|B	Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, bS1 and RafH.	ELECTRON MICROSCOPY	2.7	118
4		8WI7\|1\|B	Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.	ELECTRON MICROSCOPY	3.5	118
5		8WIC\|1\|B	Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E- tRNA and RafH.	ELECTRON MICROSCOPY	3.5	117
6		8WIB\|1\|B	Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.	ELECTRON MICROSCOPY	3.5	117
7		8WHY\|1\|B	Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome and RafH.	ELECTRON MICROSCOPY	2.7	117
8		8WHX\|1\|B	Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.	ELECTRON MICROSCOPY	2.8	117
9		8KAB\|1\|B	Mycobacterium smegmatis 50S ribosomal subunit-HflX complex	ELECTRON MICROSCOPY	3.3	118
10		7Y41\|1\|B	Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth	ELECTRON MICROSCOPY	4.1	118
11		7XAM\|1\|B	Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth	ELECTRON MICROSCOPY	3.5	118
12		8XZ3\|1\|B	Mycobacterium smegmatis 50S ribosomal subunit with Erythromycin	ELECTRON MICROSCOPY	3.6	118
13		5O60\|1\|B	Structure of the 50S large ribosomal subunit from Mycobacterium smegmatis	ELECTRON MICROSCOPY	3.18	118
14		8V9L\|1\|B	Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)	ELECTRON MICROSCOPY	3	118
15		8V9K\|1\|B	Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)	ELECTRON MICROSCOPY	3.1	118
16		8V9J\|1\|B	Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4)	ELECTRON MICROSCOPY	3.1	118
17		6DZP\|1\|B	Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunit	ELECTRON MICROSCOPY	3.42	118
18		6DZI\|1\|B	Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex	ELECTRON MICROSCOPY	3.46	118
19		5XYM\|1\|B	Large subunit of Mycobacterium smegmatis	ELECTRON MICROSCOPY	3.08	116

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

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