NR_20.0_99059.3

Members (43)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	7PAL\|1\|6 (rep)	Transfer RNA	mRNA, tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	4.7	76	2022-05-25
2	7P6Z\|1\|7	Transfer RNA	mRNA, tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	Mycoplasma pneumoniae 70S ribosome in untreated cells	Electron microscopy	3.5	76	2022-05-25
3	7PAK\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cells	Electron microscopy	5.3	76	2022-05-25
4	7PHB\|1\|6	Transfer RNA	mRNA, tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells	Electron microscopy	4.9	76	2022-05-25
5	7PIB\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells	Electron microscopy	4.7	76	2022-05-25
6	7PI9\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells	Electron microscopy	6.3	76	2022-05-25
7	7PAI\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with P-site tRNA in Mycoplasma pneumoniae cells	Electron microscopy	6.7	76	2022-05-25
8	7PIT\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	Electron microscopy	5.7	76	2022-05-25
9	7PAM\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	6.8	76	2022-05-25
10	7PAO\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	7	76	2022-05-25
11	7PHB\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells	Electron microscopy	4.9	76	2022-05-25
12	7PAL\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	4.7	76	2022-05-25
13	7PAJ\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	7.3	76	2022-05-25
14	7PIB\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells	Electron microscopy	4.7	76	2022-05-25
15	7PHA\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cells	Electron microscopy	8.5	76	2022-05-25
16	7PAK\|1\|6	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cells	Electron microscopy	5.3	76	2022-05-25
17	7PHA\|1\|6	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cells	Electron microscopy	8.5	76	2022-05-25
18	7PH9\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cells	Electron microscopy	8.7	76	2022-05-25
19	7PAR\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	8.2	76	2022-05-25
20	7PI9\|1\|6	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells	Electron microscopy	6.3	76	2022-05-25
21	7PAQ\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	8.9	76	2022-05-25
22	7PIT\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	Electron microscopy	5.7	76	2022-05-25
23	7PAM\|1\|6	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	6.8	76	2022-05-25
24	7PIC\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with P/E-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells	Electron microscopy	9.1	76	2022-05-25
25	7PI8\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells	Electron microscopy	8.9	76	2022-05-25
26	7PAJ\|1\|6	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	7.3	76	2022-05-25
27	7PIO\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells	Electron microscopy	9.5	76	2022-05-25
28	7PAR\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	8.2	76	2022-05-25
29	7PAO\|1\|6	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	7	76	2022-05-25
30	7PAH\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	9.5	76	2022-05-25
31	7PAN\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	9.7	76	2022-05-25
32	7PAJ\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	7.3	76	2022-05-25
33	7PIP\|1\|6	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells	Electron microscopy	9.3	76	2022-05-25
34	7PAQ\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	8.9	76	2022-05-25
35	7PIP\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells	Electron microscopy	9.3	76	2022-05-25
36	7PAN\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	9.7	76	2022-05-25
37	7PIQ\|1\|6	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	Electron microscopy	9.7	76	2022-05-25
38	7PIQ\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	Electron microscopy	9.7	76	2022-05-25
39	7PIR\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	Electron microscopy	12.1	76	2022-05-25
40	7PAH\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cells	Electron microscopy	9.5	76	2022-05-25
41	7PIR\|1\|6	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	Electron microscopy	12.1	76	2022-05-25
42	7PIA\|1\|8	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells	Electron microscopy	13.6	76	2022-05-25
43	7PIA\|1\|7	Transfer RNA	tRNA-Phe	Mycoplasma pneumoniae M129	Bacteria	RF00005	70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells	Electron microscopy	13.6	76	2022-05-25

Release history

Release	4.0	4.1
Date	2025-08-13	2025-08-20

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	7PAK\|1\|6	70S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	5.3	76
2	7PAK\|1\|7	70S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	5.3	76
3	7PI9\|1\|6	70S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	6.3	76
4	7PI9\|1\|7	70S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	6.3	76
5	7PI8\|1\|7	70S ribosome with P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	8.9	76
6	7P6Z\|1\|7	Mycoplasma pneumoniae 70S ribosome in untreated cells	ELECTRON MICROSCOPY	3.5	76
7	7PIO\|1\|7	70S ribosome with P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	9.5	76
8	7PAH\|1\|8	70S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	9.5	76
9	7PAH\|1\|7	70S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	9.5	76
10	7PAI\|1\|7	70S ribosome with P-site tRNA in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	6.7	76
11	7PH9\|1\|7	70S ribosome with P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	8.7	76
12	7PAR\|1\|7	70S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	8.2	76
13	7PAR\|1\|8	70S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	8.2	76
14	7PHA\|1\|7	70S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	8.5	76
15	7PAJ\|1\|8	70S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	7.3	76
16	7PAJ\|1\|6	70S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	7.3	76
17	7PAJ\|1\|7	70S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	7.3	76
18	7PAL\|1\|7	70S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	4.7	76
19	7PAL\|1\|6	70S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	4.7	76
20	7PHB\|1\|6	70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	4.9	76
21	7PHB\|1\|7	70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	4.9	76
22	7PIQ\|1\|7	70S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	9.7	76
23	7PIQ\|1\|6	70S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	9.7	76
24	7PHA\|1\|6	70S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	8.5	76
25	7PIP\|1\|7	70S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	9.3	76
26	7PIP\|1\|6	70S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	9.3	76
27	7PIB\|1\|7	70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	4.7	76
28	7PIB\|1\|8	70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	4.7	76
29	7PIT\|1\|8	70S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	5.7	76
30	7PIT\|1\|7	70S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	5.7	76
31	7PAQ\|1\|7	70S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	8.9	76
32	7PAQ\|1\|8	70S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	8.9	76
33	7PAN\|1\|7	70S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	9.7	76
34	7PAN\|1\|8	70S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	9.7	76
35	7PIA\|1\|8	70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	13.6	76
36	7PIA\|1\|7	70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	13.6	76
37	7PIC\|1\|8	70S ribosome with P/E-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	9.1	76
38	7PAO\|1\|6	70S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	7	76
39	7PAO\|1\|8	70S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	7	76
40	7PAM\|1\|6	70S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	6.8	76
41	7PAM\|1\|8	70S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	6.8	76
42	7PIR\|1\|8	70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	12.1	76
43	7PIR\|1\|6	70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells	ELECTRON MICROSCOPY	12.1	76

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_20.0_99059.3 Current

Release history

Parents

Children