#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
17PAL|1|6 (rep)Transfer RNAmRNA, tRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy4.7762022-05-25
27P6Z|1|7Transfer RNAmRNA, tRNA-PheMycoplasma pneumoniae M129BacteriaRF00005Mycoplasma pneumoniae 70S ribosome in untreated cellsElectron microscopy3.5762022-05-25
37PAK|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cellsElectron microscopy5.3762022-05-25
47PHB|1|6Transfer RNAmRNA, tRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy4.9762022-05-25
57PIB|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy4.7762022-05-25
67PI9|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy6.3762022-05-25
77PAI|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P-site tRNA in Mycoplasma pneumoniae cellsElectron microscopy6.7762022-05-25
87PIT|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy5.7762022-05-25
99SKE|1|8tRNA-PheMycoplasmoides pneumoniae M129Model of M. pneumoniae 50S RRF EF-GElectron microscopy4.8512026-09-23
109SL6|1|7tRNA-PheMycoplasmoides pneumoniae M129Model of M. pneumoniae 70S eT-TC (flexible)Electron microscopy5.8762026-09-23
117PAM|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy6.8762022-05-25
127PAO|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy7762022-05-25
137PHB|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy4.9762022-05-25
147PAL|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy4.7762022-05-25
157PAJ|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy7.3762022-05-25
167PIB|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy4.7762022-05-25
179SL5|1|7tRNA-PheMycoplasmoides pneumoniae M129Model of M. pneumoniae 70S eT-TC (stable)Electron microscopy6.5762026-09-23
187PHA|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy8.5762022-05-25
197PAK|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cellsElectron microscopy5.3762022-05-25
207PHA|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy8.5762022-05-25
217PH9|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy8.7762022-05-25
227PAR|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy8.2762022-05-25
237PI9|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy6.3762022-05-25
247PAQ|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy8.9762022-05-25
257PIT|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy5.7762022-05-25
267PAM|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy6.8762022-05-25
277PIC|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P/E-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.1762022-05-25
287PI8|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy8.9762022-05-25
299SL4|1|7tRNA-PheMycoplasmoides pneumoniae M129Model of M. pneumoniae 70S eT-TC (collided)Electron microscopy7.2762026-09-23
307PAJ|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy7.3762022-05-25
317PIO|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.5762022-05-25
327PAR|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy8.2762022-05-25
337PAO|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy7762022-05-25
347PAH|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy9.5762022-05-25
357PAN|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy9.7762022-05-25
367PAJ|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy7.3762022-05-25
377PIP|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.3762022-05-25
387PAQ|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy8.9762022-05-25
397PIP|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.3762022-05-25
407PAN|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy9.7762022-05-25
417PIQ|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.7762022-05-25
427PHC|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy9.9762022-05-25
437PIQ|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.7762022-05-25
447PIR|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy12.1762022-05-25
457PHC|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy9.9762022-05-25
469SK9|1|6P-tRNAMycoplasmoides pneumoniae M129Model of M. pneumoniae 30S P-tRNAElectron microscopy9.4762026-09-23
477PAH|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy9.5762022-05-25
487PIR|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy12.1762022-05-25
497PIA|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy13.6762022-05-25
507PIA|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy13.6762022-05-25
517PIS|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy15762022-05-25
527PIS|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy15762022-05-25
537PAS|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P/E-site tRNA in Mycoplasma pneumoniae cellsElectron microscopy16732022-05-25
549SKF|1|7tRNA-PheMycoplasmoides pneumoniae M129Model of M. pneumoniae 70S membrane complexElectron microscopy8.6762026-09-23

Release history

Release4.58
Date2026-09-23

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
17PAS|1|870S ribosome with P/E-site tRNA in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY1673
27PIR|1|670S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY12.176
37PIR|1|870S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY12.176
47PAM|1|870S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.876
57PAM|1|670S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.876
67PAO|1|870S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY776
77PAO|1|670S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY776
87PIC|1|870S ribosome with P/E-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.176
97PIA|1|770S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY13.676
107PIA|1|870S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY13.676
117PAN|1|870S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.776
127PAN|1|770S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.776
137PAQ|1|770S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.976
147PAQ|1|870S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.976
157PIT|1|770S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY5.776
167PIT|1|870S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY5.776
177PIB|1|870S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.776
187PIB|1|770S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.776
197PIQ|1|770S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.776
207PIQ|1|670S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.776
219SK9|1|6Model of M. pneumoniae 30S P-tRNAELECTRON MICROSCOPY9.476
227PAL|1|670S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.776
237PAL|1|770S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.776
247PHB|1|670S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.976
257PHB|1|770S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.976
267PAJ|1|870S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY7.376
277PAJ|1|770S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY7.376
287PAJ|1|670S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY7.376
297PAK|1|770S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY5.376
307PAK|1|670S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY5.376
317PIO|1|770S ribosome with P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.576
327PHA|1|770S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.576
339SKF|1|7Model of M. pneumoniae 70S membrane complexELECTRON MICROSCOPY8.676
349SL5|1|7Model of M. pneumoniae 70S eT-TC (stable)ELECTRON MICROSCOPY6.576
357PAI|1|770S ribosome with P-site tRNA in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.776
369SL6|1|7Model of M. pneumoniae 70S eT-TC (flexible)ELECTRON MICROSCOPY5.876
379SL4|1|7Model of M. pneumoniae 70S eT-TC (collided)ELECTRON MICROSCOPY7.276
389SKE|1|8Model of M. pneumoniae 50S RRF EF-GELECTRON MICROSCOPY4.851
397PAH|1|770S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.576
407PAH|1|870S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.576
417PH9|1|770S ribosome with P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.776
427PAR|1|870S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.276
437PAR|1|770S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.276
447PI8|1|770S ribosome with P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.976
457P6Z|1|7Mycoplasma pneumoniae 70S ribosome in untreated cellsELECTRON MICROSCOPY3.576
467PI9|1|770S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.376
477PI9|1|670S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.376
487PHA|1|670S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.576
497PIP|1|770S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.376
507PIP|1|670S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.376
517PHC|1|870S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.976
527PHC|1|670S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.976
537PIS|1|870S ribosome with EF-G, A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY1576
547PIS|1|670S ribosome with EF-G, A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY1576

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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